BLASTX nr result

ID: Coptis23_contig00003184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003184
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...   123   1e-26
ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplast...   121   7e-26
gb|ABR16629.1| unknown [Picea sitchensis]                             121   7e-26
ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplast...   120   9e-26
ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplast...   120   9e-26

>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
           gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
           putative [Ricinus communis]
          Length = 732

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/68 (83%), Positives = 65/68 (95%)
 Frame = -1

Query: 204 QAHYCYDKAQLKTLQSTFPSNASYNIQRFKGLGEMMPLQLWETTMDPEKRMLKQLVVEDA 25
           Q +YCYD+A+LK L+S+FP NASYNIQRFKGLGEMMPLQLWETTMDPE+R+LKQLVVEDA
Sbjct: 637 QVYYCYDEAELKKLRSSFPQNASYNIQRFKGLGEMMPLQLWETTMDPEQRLLKQLVVEDA 696

Query: 24  AEANMVFS 1
           AEAN+VFS
Sbjct: 697 AEANVVFS 704


>ref|XP_003521129.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Glycine max]
          Length = 726

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = -1

Query: 204 QAHYCYDKAQLKTLQSTFPSNASYNIQRFKGLGEMMPLQLWETTMDPEKRMLKQLVVEDA 25
           Q HYCYD A LK LQ +FP+NASYN+QRFKGLGEMMPLQLWETTMDPE+R+LKQL VEDA
Sbjct: 631 QVHYCYDDADLKKLQRSFPANASYNMQRFKGLGEMMPLQLWETTMDPERRLLKQLKVEDA 690

Query: 24  AEANMVFS 1
           AEAN+VFS
Sbjct: 691 AEANIVFS 698


>gb|ABR16629.1| unknown [Picea sitchensis]
          Length = 737

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/68 (83%), Positives = 61/68 (89%)
 Frame = -1

Query: 204 QAHYCYDKAQLKTLQSTFPSNASYNIQRFKGLGEMMPLQLWETTMDPEKRMLKQLVVEDA 25
           QAHYC+D+ +LK LQ TFPSNASYNIQRFKGLGEMMPLQLWETT+DP  R LKQL VEDA
Sbjct: 642 QAHYCFDEDELKKLQKTFPSNASYNIQRFKGLGEMMPLQLWETTLDPATRKLKQLTVEDA 701

Query: 24  AEANMVFS 1
           AEANMVFS
Sbjct: 702 AEANMVFS 709


>ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 719

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = -1

Query: 204 QAHYCYDKAQLKTLQSTFPSNASYNIQRFKGLGEMMPLQLWETTMDPEKRMLKQLVVEDA 25
           Q +YCYD  +LK +QS+FPSNASYNIQRFKGLGEMMP QLWETTMDPE+RMLKQL VEDA
Sbjct: 624 QVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDA 683

Query: 24  AEANMVFS 1
           AEAN+VFS
Sbjct: 684 AEANVVFS 691


>ref|XP_004144333.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 719

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = -1

Query: 204 QAHYCYDKAQLKTLQSTFPSNASYNIQRFKGLGEMMPLQLWETTMDPEKRMLKQLVVEDA 25
           Q +YCYD  +LK +QS+FPSNASYNIQRFKGLGEMMP QLWETTMDPE+RMLKQL VEDA
Sbjct: 624 QVYYCYDDKELKKVQSSFPSNASYNIQRFKGLGEMMPAQLWETTMDPERRMLKQLAVEDA 683

Query: 24  AEANMVFS 1
           AEAN+VFS
Sbjct: 684 AEANVVFS 691


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