BLASTX nr result

ID: Coptis23_contig00003180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003180
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...   137   6e-30
ref|XP_002523324.1| conserved hypothetical protein [Ricinus comm...   121   4e-25
ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...   120   6e-25
gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]        108   4e-21
ref|XP_002516652.1| conserved hypothetical protein [Ricinus comm...   102   2e-19

>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
            gi|147794098|emb|CAN71155.1| hypothetical protein
            VITISV_030317 [Vitis vinifera]
            gi|297745486|emb|CBI40566.3| unnamed protein product
            [Vitis vinifera]
          Length = 228

 Score =  137 bits (345), Expect = 6e-30
 Identities = 96/239 (40%), Positives = 123/239 (51%), Gaps = 13/239 (5%)
 Frame = -3

Query: 1069 MGFEAVHESSSTPKISYFSLPSQXXXXXXXXXXXXXXPSSIPFFWEEAPGKPRXXXXXXX 890
            MG +A  + S  PK+  FS+  Q               +S+PF WEE PGKPR       
Sbjct: 1    MGSQAESDPSYAPKLPLFSIAMQEPEPSGTQTPPLQTTASVPFRWEEEPGKPR-----PC 55

Query: 889  XXXXTFSKPSSARCLELPPRLL-SEVKSTNMPSPSTVFDGPYIARSVSHSAVF--ARERL 719
                  SK SSARCL+ PPRL  S+VK + MPSP+TV +GPY+ARS    + F  AR+R 
Sbjct: 56   TALVALSKSSSARCLDPPPRLFSSDVKLSKMPSPTTVLEGPYVARSAFQCSSFRVARDRR 115

Query: 718  ASFQELGSISKRRESK----EKGYFAAWGRKSTKRSTRVCED-SCAISSCPSSLG----G 566
             SF   GS  + +        +G+F  WGRK+ K              S P++ G    G
Sbjct: 116  HSFGRGGSPERGQLGAMVLGRRGFFGGWGRKNHKGKREASRSLDLEEGSSPATTGDYDSG 175

Query: 565  AGDSEDITKVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW-RSRKTKKDG 392
             G SE     K+TR  R+G   +LS +R  SH WAS+Y   KQVV  PW RS+K KKDG
Sbjct: 176  GGSSE-----KMTRMSRSGRYLSLSQAR--SHFWASVYEGLKQVV--PWKRSKKLKKDG 225


>ref|XP_002523324.1| conserved hypothetical protein [Ricinus communis]
            gi|223537412|gb|EEF39040.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 239

 Score =  121 bits (303), Expect = 4e-25
 Identities = 94/250 (37%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
 Frame = -3

Query: 1069 MGFEAVHESSSTPKISYFSLPSQXXXXXXXXXXXXXXPSS--IPFFWEEAPGKPRXXXXX 896
            MG EA  E SSTP++  F  P                 SS  +PF WEE PGKPR     
Sbjct: 1    MGSEAEAEDSSTPRLPLFLKPPYVQSPQRSGMLTPPLYSSAAVPFRWEEEPGKPRECSGA 60

Query: 895  XXXXXXTFSKPSSARCLELPPRLLSEVKSTNMPSPSTVFDGPYIARS----VSHSAVFAR 728
                        S +CLELPPRLL E   + +PSP+TV DGPY  RS     S   +  R
Sbjct: 61   ITTPTDL-----SPKCLELPPRLLLEANVSKLPSPTTVLDGPYTGRSSRFQSSSFRMIRR 115

Query: 727  ERLASF--------QELGSISKRRESKEKGYFAA--WGRKSTKRSTRVCEDSCAISSCPS 578
            E   SF        Q    +  +R  K++G+  +  WGR+  K    V   S    S  S
Sbjct: 116  ECYGSFRTCSPERDQFTALVLSKRGIKDRGFLGSWRWGRRGFKGKREVAGASYVFPS--S 173

Query: 577  SL-----GGAGDSEDIT--KVKITRFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPW 419
            S+      G  + ++I+   V ITR RR+GS     S+   SH WA+IY   KQVV  PW
Sbjct: 174  SMDREVEDGNEEEKEISSKNVTITRIRRSGSF----STSSRSHFWATIYEGLKQVV--PW 227

Query: 418  RSRKTKKDGF 389
            RS K KKDGF
Sbjct: 228  RSGKLKKDGF 237


>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
            predicted protein [Populus trichocarpa]
          Length = 203

 Score =  120 bits (302), Expect = 6e-25
 Identities = 86/219 (39%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
 Frame = -3

Query: 1051 HESSSTPKISYFSLPSQXXXXXXXXXXXXXXP-SSIPFFWEEAPGKPRXXXXXXXXXXXT 875
            ++ S TPK+S FSL S+                +S+PF WEEAPGKPR            
Sbjct: 10   YDPSPTPKLSLFSLSSKLHESPAGMLTPPIHTLASVPFKWEEAPGKPRPSCATQ------ 63

Query: 874  FSKPSSARCLELPPRLLSEVKSTNMPSPSTVFDGPYIARSVSHSAVFARERLASFQELGS 695
             SKP  ARCLELPPRLL+E K +NMPSP+TVFDGPY+ RS+S   +     L++ + LG 
Sbjct: 64   -SKPKFARCLELPPRLLNEAKVSNMPSPTTVFDGPYLPRSLS---LGKGRSLSNLENLG- 118

Query: 694  ISKRRESKEKGYFAA--WG--RKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDITKVKIT 527
                  SKE+  F +  WG  RK+ K            +     +G      +  +VKIT
Sbjct: 119  -CGEVNSKERVTFGSGRWGFFRKNNKE---------VAAPSHGDIGVNHGGREAVRVKIT 168

Query: 526  RFRRTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSR 410
            R RR  S   LS +R  SH W  I  +FK  V  PW  R
Sbjct: 169  RIRRRSSFLGLSHTR--SHFWTDICESFKHAV--PWTRR 203


>gb|ADN33748.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 234

 Score =  108 bits (269), Expect = 4e-21
 Identities = 74/224 (33%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
 Frame = -3

Query: 1045 SSSTPKISYFSLPSQXXXXXXXXXXXXXXPSSIPFFWEEAPGKPRXXXXXXXXXXXTFSK 866
            SS+ PK+S FSLP Q                S+PF WEEAPGKPR             SK
Sbjct: 10   SSTPPKLSLFSLPRQPPEPPGMVTPPLHASISVPFQWEEAPGKPRPFGIIEPN-----SK 64

Query: 865  PSSARCLELPPRLLSEVKSTNMPSPSTVFDGPYIARSVSHSAVF----ARERLASFQELG 698
            P SAR L+LPPRL ++ K  +  SP+T  D P   R +S S  F                
Sbjct: 65   PKSARSLDLPPRLFADAKVAHFASPTTAVDEPIFGRDLSSSLSFRFPDTWAETVRATATA 124

Query: 697  SISKRRESKEKGYFAAWGRKSTKRSTRVCEDSCAISSCPSSLGGAGDSEDITKVKITRFR 518
            + +  RE K+  Y  +    S +++  + +    I+         G S+  T+VKITRFR
Sbjct: 125  TATGTREGKDGKYVGSRRWMSFRKNKEIPKSGSEIAVTGGGDRNVGSSDGETRVKITRFR 184

Query: 517  RTGSLFNLSSSRPHSHLWASIYGTFKQVVPRPWRSRKTKKDGFS 386
               S F   +S+  SH  A+IYG+ KQ +   WR +  + +  S
Sbjct: 185  SRRSFFRKPNSK--SHFIANIYGSLKQAI--SWRRKGDEMENIS 224


>ref|XP_002516652.1| conserved hypothetical protein [Ricinus communis]
            gi|223544147|gb|EEF45671.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 218

 Score =  102 bits (255), Expect = 2e-19
 Identities = 79/208 (37%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
 Frame = -3

Query: 1051 HESSSTPKISYFSLPS----QXXXXXXXXXXXXXXPSSIPFFWEEAPGKPR-XXXXXXXX 887
            HE S  PK+S  SLP+    Q              P+S+PF WEEAPGKPR         
Sbjct: 11   HEPSPAPKLSLLSLPNKPYEQQQQQPGLLTPPIHAPASVPFKWEEAPGKPRPSCTNNKSN 70

Query: 886  XXXTFSKPSSA-RCLELPPRLLSEV-KSTNMPSPSTVFDGPYIARSVSHS--AVFARERL 719
                  KP +A RCL+LPPRLL E  K  N+PSP+TV DGPY+  + +       +R R 
Sbjct: 71   SNNHHPKPKTAKRCLDLPPRLLFEASKVNNIPSPTTVLDGPYMGTTTTRDDHQSLSRSRS 130

Query: 718  ASFQELGSISKRRESKEKGYFAAWG--RKSTKRSTRVCEDSCAIS-SCPSSLGGAGDSED 548
             SF +  S    ++  +KG  + WG  RK +     VC+ S   S  C     G  D + 
Sbjct: 131  LSFGKGRSFIGLQKLNKKG-SSRWGSFRKDSNTKEVVCDGSVDFSVPC-----GFDDGDH 184

Query: 547  ITKVKITRFRRTGSLFNLSSSRPHSHLW 464
             +KVKITR +R  S     SS   SHLW
Sbjct: 185  GSKVKITRIKRKPSFLTSFSSSSRSHLW 212


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