BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003178
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly prot...   266   5e-69
gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucaly...   258   1e-66
ref|XP_002458268.1| hypothetical protein SORBIDRAFT_03g030300 [S...   252   7e-65
ref|XP_003525426.1| PREDICTED: iron-sulfur cluster assembly enzy...   251   1e-64
gb|AFK36333.1| unknown [Lotus japonicus]                              251   2e-64

>ref|XP_002265909.1| PREDICTED: iron sulfur cluster assembly protein 1, mitochondrial
           [Vitis vinifera]
          Length = 155

 Score =  266 bits (680), Expect = 5e-69
 Identities = 133/154 (86%), Positives = 142/154 (92%), Gaps = 2/154 (1%)
 Frame = -1

Query: 795 MLRTNCKKFLGLGQQ-LQKKNPAVIRLYHERVVDHYNNPRNVGSFDKNDPKVGTGLVGAP 619
           MLR+ C + LGLGQQ  Q ++ A++R YHERVVDHYNNPRNVGSFDKNDP VGTGLVGAP
Sbjct: 1   MLRSGCSRILGLGQQGKQAQSQALLRFYHERVVDHYNNPRNVGSFDKNDPDVGTGLVGAP 60

Query: 618 ACGDVMKLQIKVDDE-GKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIA 442
           ACGDVMKLQIKVDD+ GKIVDACFKTFGCGSAIASSSVATEWVKGKQ EEVL+IKNTEIA
Sbjct: 61  ACGDVMKLQIKVDDQTGKIVDACFKTFGCGSAIASSSVATEWVKGKQTEEVLSIKNTEIA 120

Query: 441 KHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKS 340
           KHLSLPPVKLHCSMLAEDAIKAAVKDYEAKR K+
Sbjct: 121 KHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKT 154


>gb|ACI47519.1| iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis]
          Length = 173

 Score =  258 bits (659), Expect = 1e-66
 Identities = 138/173 (79%), Positives = 144/173 (83%), Gaps = 8/173 (4%)
 Frame = -1

Query: 795 MLRTNCKKFLGLGQQLQKKNPAV--IRLYHERVVDHYNNPRNVGSFDKNDPKVGTGLVGA 622
           MLR   KK  GL          V  +RLYHERVVDHYNNPRNVGSFDKNDP VGTGLVGA
Sbjct: 1   MLRLGAKKLAGLAGAAAGPARVVPPLRLYHERVVDHYNNPRNVGSFDKNDPAVGTGLVGA 60

Query: 621 PACGDVMKLQIKVDDE-GKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEI 445
           PACGDVMKLQIKVD+E GKIVDA FKTFGCGSAIASSSVATEWVKGKQMEEVL+IKNTEI
Sbjct: 61  PACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEI 120

Query: 444 AKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKSGASAE-----PVEKAADA 301
           AKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKR K   S++     P+EKAADA
Sbjct: 121 AKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKLDGSSDSAKDAPLEKAADA 173


>ref|XP_002458268.1| hypothetical protein SORBIDRAFT_03g030300 [Sorghum bicolor]
           gi|241930243|gb|EES03388.1| hypothetical protein
           SORBIDRAFT_03g030300 [Sorghum bicolor]
          Length = 181

 Score =  252 bits (644), Expect = 7e-65
 Identities = 132/174 (75%), Positives = 142/174 (81%), Gaps = 8/174 (4%)
 Frame = -1

Query: 798 IMLRTNCKKF-LGLGQQLQKKNPAV----IRLYHERVVDHYNNPRNVGSFDKNDPKVGTG 634
           ++L    ++F LG G    +  PA     +R YHERVVDHYNNPRNVGSFDK DP VGTG
Sbjct: 8   LLLAPGLRRFGLGTGAAAGEAGPAAAAAGVRAYHERVVDHYNNPRNVGSFDKEDPNVGTG 67

Query: 633 LVGAPACGDVMKLQIKVD-DEGKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIK 457
           LVGAPACGDVMKLQI+VD D GKIVDACFKTFGCGSAIASSSVATEWVKGK M+EVLTIK
Sbjct: 68  LVGAPACGDVMKLQIRVDEDSGKIVDACFKTFGCGSAIASSSVATEWVKGKPMDEVLTIK 127

Query: 456 NTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKSGASA--EPVEKAADA 301
           NTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK+ K G      P EKAA+A
Sbjct: 128 NTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKKVKMGQKGVDSPSEKAAEA 181


>ref|XP_003525426.1| PREDICTED: iron-sulfur cluster assembly enzyme ISCU,
           mitochondrial-like [Glycine max]
          Length = 165

 Score =  251 bits (642), Expect = 1e-64
 Identities = 133/158 (84%), Positives = 138/158 (87%), Gaps = 1/158 (0%)
 Frame = -1

Query: 795 MLRTNCKKFLGLGQQLQKKNPAVIRLYHERVVDHYNNPRNVGSFDKNDPKVGTGLVGAPA 616
           MLR   K+ LG    L  + PA  RLYHERVVDHY+NPRNVGS DKNDP VGTGLVGAPA
Sbjct: 1   MLRVGAKRLLGT-TSLGVRVPA--RLYHERVVDHYDNPRNVGSLDKNDPSVGTGLVGAPA 57

Query: 615 CGDVMKLQIKVDDE-GKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAK 439
           CGDVMKLQIKVDD+ GKIVDA FKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAK
Sbjct: 58  CGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAK 117

Query: 438 HLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKSGASAE 325
           HLSLPPVKLHCSMLAEDAIKAAVKDYEAKR K+ AS E
Sbjct: 118 HLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKATASGE 155


>gb|AFK36333.1| unknown [Lotus japonicus]
          Length = 162

 Score =  251 bits (641), Expect = 2e-64
 Identities = 133/166 (80%), Positives = 139/166 (83%), Gaps = 1/166 (0%)
 Frame = -1

Query: 795 MLRTNCKKFLGLGQQLQKKNPAVIRLYHERVVDHYNNPRNVGSFDKNDPKVGTGLVGAPA 616
           MLR + K+  G   Q  +  PA  R YHERVVDHY NPRNVGSFDKNDP VGTGLVGAPA
Sbjct: 1   MLRVSAKRVFGTASQAIRV-PA--RFYHERVVDHYENPRNVGSFDKNDPTVGTGLVGAPA 57

Query: 615 CGDVMKLQIKVDDE-GKIVDACFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAK 439
           CGDVMKLQIK+DD  GKI DACFKTFGCGSAIASSSVATEWVKGK MEEVLTIKNTEIAK
Sbjct: 58  CGDVMKLQIKIDDSTGKITDACFKTFGCGSAIASSSVATEWVKGKHMEEVLTIKNTEIAK 117

Query: 438 HLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKSGASAEPVEKAADA 301
           HLSLPPVKLHCSMLAEDAIKAAVKDYEAKR  +GA A   +KAA A
Sbjct: 118 HLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAMAGA-ATTEQKAATA 162