BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003167
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi...   533   e-149
ref|XP_002530468.1| pentatricopeptide repeat-containing protein,...   491   e-136
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi...   470   e-130
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g...   441   e-121
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo...   441   e-121

>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  533 bits (1373), Expect = e-149
 Identities = 260/411 (63%), Positives = 327/411 (79%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MPE+NVASWN+++TGY H  +M EA  LF+QM E++ VSWMVMISGYVHI +Y   W +F
Sbjct: 290  MPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVF 349

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
            ++M      PDQSIFVV LSAITGL+D  LIG+LR ++IKT YE +VVVG+AILNAY+R 
Sbjct: 350  VKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRN 409

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYA 542
            G L+LA  FFE M  RNE+SW+TMI+AF+   RL+DAI +YE +P+ +V ++TAM+T YA
Sbjct: 410  GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYA 469

Query: 543  QNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISA 722
            Q G I +AR +F+EI NPNV+ WNA++AGY +NGM  EA D+F +MP +NSASWAA+I+ 
Sbjct: 470  QVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAG 529

Query: 723  FAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCN 902
            F Q+ +S EAL++L ELH+SG VPSDS FTSAL ACANIG +++GR +HSL IK GCQ N
Sbjct: 530  FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589

Query: 903  SYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPR 1082
            SYV NGLISMYAKC N+E+ + VF T+RV+DTVSWNSLISGLS+N MLDDAR +FEKMP+
Sbjct: 590  SYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649

Query: 1083 RDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
            RDVVSWTA+ISAY Q G G +A +LF DM+A G+KPN  TVT LL  CG+L
Sbjct: 650  RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNL 700



 Score =  184 bits (467), Expect = 4e-44
 Identities = 94/300 (31%), Positives = 172/300 (57%)
 Frame = +3

Query: 312  EENVVVGTAILNAYSRTGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEM 491
            + +VV   +++N YS+ G+++ A   F+    +N  +W+ +++ ++   R+E+A  V+E 
Sbjct: 199  QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFES 258

Query: 492  IPDPSVVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMF 671
            + + +VVS  AM++GY QNG +  AR+LF+E+P  NV +WN++V GY       EA ++F
Sbjct: 259  MTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELF 318

Query: 672  SRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALD 851
             +MPERNS SW  +IS +       EA  +  ++ ++   P  S+F   L A   +  L+
Sbjct: 319  DQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLE 378

Query: 852  MGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLS 1031
            +   L  + IK G + +  VG+ +++ Y +  +L+     F TM  R+  SW ++I+  +
Sbjct: 379  LIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFA 438

Query: 1032 QNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTG 1211
            Q   LDDA  ++E++P + V + TAM++AYAQ G+   A  +F +++   V   ++ + G
Sbjct: 439  QCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG 498



 Score =  183 bits (465), Expect = 7e-44
 Identities = 122/445 (27%), Positives = 200/445 (44%), Gaps = 39/445 (8%)
 Frame = +3

Query: 9    ERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFLR 188
            E +V   + +L  Y+ +G +D A   FE M E++  SW  MI+ +      D   +L+ R
Sbjct: 393  EGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYER 452

Query: 189  MHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTGR 368
            +      P+Q++   T + +T       I   R L        NVV   AI+  Y++ G 
Sbjct: 453  V------PEQTVATKT-AMMTAYAQVGRIQKAR-LIFDEILNPNVVAWNAIIAGYTQNGM 504

Query: 369  LNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVY------EMIPDPS-------- 506
            L  A   F+ M V+N  SW+ MI+ F  +    +A+ +         +P  S        
Sbjct: 505  LKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSA 564

Query: 507  -----------VVSRTAMLTG--------------YAQNGGIHEARRLFEEIPNPNVITW 611
                       V+   A+ TG              YA+ G + +   +F  I   + ++W
Sbjct: 565  CANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSW 624

Query: 612  NAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMV 791
            N++++G ++N M D+A  +F +MP+R+  SW A+ISA+ Q+G  E AL +  ++   G+ 
Sbjct: 625  NSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIK 684

Query: 792  PSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQV 971
            P+    TS L AC N+GA+ +G Q H+L  K G     +VGN LI+MY KC         
Sbjct: 685  PNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-------- 736

Query: 972  FNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAF 1151
                                     +D   +FE+MP  D+++W A++   AQ G G  A 
Sbjct: 737  ------------------------YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAI 772

Query: 1152 ELFFDMMASGVKPNSSTVTGLLVTC 1226
            ++F  M   G+ P+  +  G+L  C
Sbjct: 773  KIFEQMEVEGILPDQMSFLGVLCAC 797



 Score =  162 bits (410), Expect = 2e-37
 Identities = 110/449 (24%), Positives = 208/449 (46%), Gaps = 39/449 (8%)
 Frame = +3

Query: 6    PERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFL 185
            P+ ++   NT +      G+++EA  +F +M ++D+VSW  MI+GY    + D    LF 
Sbjct: 167  PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF- 225

Query: 186  RMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTG 365
                                     D F+   +RT +I             +L  Y++ G
Sbjct: 226  -------------------------DAFVGKNIRTWTI-------------LLTGYAKEG 247

Query: 366  RLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQ 545
            R+  A + FE+MT RN  SW+ MIS +  +  L++A  +++ +P+ +V S  +++TGY  
Sbjct: 248  RIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCH 307

Query: 546  NGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRM--------------- 680
               + EAR LF+++P  N ++W  M++GY     + EA D+F +M               
Sbjct: 308  CYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVV 367

Query: 681  ------------------------PERNSASWAALISAFAQSGQSEEALKMLSELHKSGM 788
                                     E +    +A+++A+ ++G  + A+     + +   
Sbjct: 368  LSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER-- 425

Query: 789  VPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQ 968
              ++  +T+ + A A  G LD   QL+    +      +     +++ YA+   ++    
Sbjct: 426  --NEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKT----AMMTAYAQVGRIQKARL 479

Query: 969  VFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLA 1148
            +F+ +   + V+WN++I+G +QN ML +A+ +F+KMP ++  SW AMI+ + Q  +   A
Sbjct: 480  IFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539

Query: 1149 FELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             EL  ++  SG  P+ S+ T  L  C ++
Sbjct: 540  LELLIELHRSGSVPSDSSFTSALSACANI 568



 Score =  161 bits (408), Expect = 3e-37
 Identities = 103/395 (26%), Positives = 188/395 (47%), Gaps = 41/395 (10%)
 Frame = +3

Query: 15   NVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFLRMH 194
            NV +WN ++ GY+ +G + EA  LF++M  K+  SW  MI+G+V  +E     +L + +H
Sbjct: 488  NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547

Query: 195  YNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTGRLN 374
             +G +P  S F   LSA   + D  +   + +L+IKT  + N  V   +++ Y++ G + 
Sbjct: 548  RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607

Query: 375  LACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQNGG 554
                 F  + V++  SW+++IS  S +  L+DA  V+E +P   VVS TA+++ Y Q G 
Sbjct: 608  DGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGH 667

Query: 555  IHEARRLFEEI------PNPNVIT---------------------------------WNA 617
               A  LF ++      PN   +T                                  N+
Sbjct: 668  GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS 727

Query: 618  MVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPS 797
            ++  Y K G +++   +F  MPE +  +W A++   AQ+G  +EA+K+  ++   G++P 
Sbjct: 728  LITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPD 786

Query: 798  DSMFTSALFACANIGALDMG-RQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQVF 974
               F   L AC++ G +D G    +S+T K G     Y    ++ +  +   L     + 
Sbjct: 787  QMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALI 846

Query: 975  NTMRVR-DTVSWNSLISGLSQNNMLDDARSIFEKM 1076
              M V+ D+V W +L+     +  ++  + + E++
Sbjct: 847  ENMPVKPDSVIWEALLGACRIHRNVELGQRVAERL 881



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 9/235 (3%)
 Frame = +3

Query: 558  HEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSG 737
            H++    +E P  ++   N  +    + G  +EA  +F+ M +R+  SW ++I+ ++Q+G
Sbjct: 157  HKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNG 216

Query: 738  QSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGN 917
            + +EA  +        +      +T  L   A  G ++  R++     ++  + N    N
Sbjct: 217  KVDEARLLFDAFVGKNI----RTWTILLTGYAKEGRIEEAREV----FESMTERNVVSWN 268

Query: 918  GLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVS 1097
             +IS Y +  +L+N  ++F+ M  ++  SWNS+++G      + +AR +F++MP R+ VS
Sbjct: 269  AMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVS 328

Query: 1098 WTAMISAYAQTGQGHLAFELFFDMMASGVKPNS-------STVTGL--LVTCGSL 1235
            W  MIS Y        A+++F  M  +  +P+        S +TGL  L   GSL
Sbjct: 329  WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSL 383


>ref|XP_002530468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530013|gb|EEF31938.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 801

 Score =  491 bits (1263), Expect = e-136
 Identities = 235/411 (57%), Positives = 312/411 (75%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MPERNV+SWN+++TGY  SG M EA  LF++M E+  VSWMVM SGYV I +Y  GW +F
Sbjct: 147  MPERNVSSWNSIITGYCKSGLMKEARELFDRMEERSSVSWMVMASGYVEISQYREGWCVF 206

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
            L M  +G+ PDQ++FVV LSAI G ND  +IG+ RTL +K  YEE+VVV TAILNAY+R 
Sbjct: 207  LMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGSFRTLVMKMGYEEDVVVATAILNAYARC 266

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYA 542
            G L+ A KFFE+M  RNE+S ++MI+AFS   RL+DAIA+YE        +RT ++  Y 
Sbjct: 267  GSLDDAFKFFESMPARNEYSLTSMIAAFSQRGRLDDAIALYEKDSKQGDATRTTIIAAYM 326

Query: 543  QNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISA 722
             NG I EA+ +F+EI NPNV+ WNAM+ GYA+NGM +EA  +F +MP RN+ SWAA+I  
Sbjct: 327  HNGRIDEAKHIFDEIVNPNVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVSWAAMIGG 386

Query: 723  FAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCN 902
            F Q+G  +E LK+ +ELH++GM+P+ S FTSALFACANIG +++G+Q+HSL+IK  CQ N
Sbjct: 387  FVQNGNGKEGLKLFTELHRTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSIKMRCQSN 446

Query: 903  SYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPR 1082
             +VGNGLISMYAKC ++E+V+ VFN+M VRDTVSWNSL+SGLS N +L+DA++ F+ MP 
Sbjct: 447  PFVGNGLISMYAKCNSVEDVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPT 506

Query: 1083 RDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
            RD VSW A+ISA+    QG +A++LF DM+++G+KPN  T+T LL  CG+L
Sbjct: 507  RDAVSWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSACGNL 557



 Score =  165 bits (418), Expect = 2e-38
 Identities = 109/420 (25%), Positives = 192/420 (45%), Gaps = 43/420 (10%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MP RN  S  +++  +S  G++D+A  L+E+  ++   +   +I+ Y+H    D    +F
Sbjct: 279  MPARNEYSLTSMIAAFSQRGRLDDAIALYEKDSKQGDATRTTIIAAYMHNGRIDEAKHIF 338

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
                      D+ +                               NVV   A+L  Y++ 
Sbjct: 339  ----------DEIV-----------------------------NPNVVAWNAMLGGYAQN 359

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYE------MIPDPSVVSRT- 521
            G L  A   F  M VRN  SW+ MI  F  +   ++ + ++       MIP  S  +   
Sbjct: 360  GMLEEAKAIFLQMPVRNAVSWAAMIGGFVQNGNGKEGLKLFTELHRTGMIPTHSCFTSAL 419

Query: 522  --------------------------------AMLTGYAQNGGIHEARRLFEEIPNPNVI 605
                                             +++ YA+   + +   +F  +   + +
Sbjct: 420  FACANIGDVEIGKQIHSLSIKMRCQSNPFVGNGLISMYAKCNSVEDVSHVFNSMNVRDTV 479

Query: 606  TWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSG 785
            +WN++V+G + N + ++A + F  MP R++ SWAA+ISA   + Q E A ++  ++  +G
Sbjct: 480  SWNSLVSGLSWNYLLNDAQNTFDNMPTRDAVSWAAIISAHVHADQGEIAWQLFLDMLSAG 539

Query: 786  MVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVA 965
            + P+D   TS L AC N+G   +G Q H+L +K G     +V N LISMY KC N++ + 
Sbjct: 540  LKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKCGNVDGL- 598

Query: 966  QVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDV----VSWTAMISAYAQTG 1133
             VF  M  RD V+WN++++G +QN +  +A  +FE+M   +V    +S+  ++SA +  G
Sbjct: 599  YVFEEMIDRDIVTWNTVLAGCAQNGLCKEATKVFEQMAEAEVFPDEISFLGVLSACSHAG 658



 Score =  165 bits (417), Expect = 3e-38
 Identities = 85/294 (28%), Positives = 159/294 (54%)
 Frame = +3

Query: 303  TSYEENVVVGTAILNAYSRTGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAV 482
            T  + + V   ++++ Y +  ++  A   F+    +N  +W+ ++S ++ +  +E+A   
Sbjct: 53   TMPQRDAVSWNSMISVYLQNNKIPDAKSLFDAFEYKNVRTWTILLSGYAKAGLIEEAETF 112

Query: 483  YEMIPDPSVVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEAT 662
            +  +P+ +VVS  AML G+ QNG +  AR+ F E+P  NV +WN+++ GY K+G+  EA 
Sbjct: 113  FRSMPERNVVSWNAMLAGFVQNGDLRNARKCFYEMPERNVSSWNSIITGYCKSGLMKEAR 172

Query: 663  DMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIG 842
            ++F RM ER+S SW  + S + +  Q  E   +   +  SG+ P  ++F   L A     
Sbjct: 173  ELFDRMEERSSVSWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFN 232

Query: 843  ALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLIS 1022
             L M     +L +K G + +  V   +++ YA+C +L++  + F +M  R+  S  S+I+
Sbjct: 233  DLGMIGSFRTLVMKMGYEEDVVVATAILNAYARCGSLDDAFKFFESMPARNEYSLTSMIA 292

Query: 1023 GLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGV 1184
              SQ   LDDA +++EK  ++   + T +I+AY   G+   A  +F +++   V
Sbjct: 293  AFSQRGRLDDAIALYEKDSKQGDATRTTIIAAYMHNGRIDEAKHIFDEIVNPNV 346



 Score =  146 bits (368), Expect = 1e-32
 Identities = 109/449 (24%), Positives = 195/449 (43%), Gaps = 39/449 (8%)
 Frame = +3

Query: 6    PERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFL 185
            P+ ++   N  +      G++ +A  LF+ M ++D VSW  MIS Y+             
Sbjct: 24   PQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQ------------ 71

Query: 186  RMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTG 365
                N  +PD             L D F    +RT +I             +L+ Y++ G
Sbjct: 72   ----NNKIPDAK----------SLFDAFEYKNVRTWTI-------------LLSGYAKAG 104

Query: 366  RLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQ 545
             +  A  FF +M  RN  SW+ M++ F  +  L +A   +  +P+ +V S  +++TGY +
Sbjct: 105  LIEEAETFFRSMPERNVVSWNAMLAGFVQNGDLRNARKCFYEMPERNVSSWNSIITGYCK 164

Query: 546  NGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMP-------------- 683
            +G + EAR LF+ +   + ++W  M +GY +   + E   +F  M               
Sbjct: 165  SGLMKEARELFDRMEERSSVSWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVG 224

Query: 684  -------------------------ERNSASWAALISAFAQSGQSEEALKMLSELHKSGM 788
                                     E +     A+++A+A+ G  ++A K      +S  
Sbjct: 225  LSAIMGFNDLGMIGSFRTLVMKMGYEEDVVVATAILNAYARCGSLDDAFKFF----ESMP 280

Query: 789  VPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQ 968
              ++   TS + A +  G LD    L+    K G    + +    I+ Y     ++    
Sbjct: 281  ARNEYSLTSMIAAFSQRGRLDDAIALYEKDSKQGDATRTTI----IAAYMHNGRIDEAKH 336

Query: 969  VFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLA 1148
            +F+ +   + V+WN+++ G +QN ML++A++IF +MP R+ VSW AMI  + Q G G   
Sbjct: 337  IFDEIVNPNVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVSWAAMIGGFVQNGNGKEG 396

Query: 1149 FELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             +LF ++  +G+ P  S  T  L  C ++
Sbjct: 397  LKLFTELHRTGMIPTHSCFTSALFACANI 425



 Score =  137 bits (344), Expect = 7e-30
 Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 39/317 (12%)
 Frame = +3

Query: 15   NVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFLRMH 194
            NV +WN +L GY+ +G ++EA  +F QM  ++ VSW  MI G+V       G KLF  +H
Sbjct: 345  NVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVSWAAMIGGFVQNGNGKEGLKLFTELH 404

Query: 195  YNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTGRLN 374
              G++P  S F   L A   + D  +   + +LSIK   + N  VG  +++ Y++   + 
Sbjct: 405  RTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSIKMRCQSNPFVGNGLISMYAKCNSVE 464

Query: 375  LACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQNGG 554
                 F +M VR+  SW++++S  SW+  L DA   ++ +P    VS  A+++ +     
Sbjct: 465  DVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRDAVSWAAIISAHVHADQ 524

Query: 555  IHEARRLFEEI------PNPNVIT---------------------------------WNA 617
               A +LF ++      PN   IT                                  NA
Sbjct: 525  GEIAWQLFLDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNA 584

Query: 618  MVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPS 797
            +++ Y K G  D    +F  M +R+  +W  +++  AQ+G  +EA K+  ++ ++ + P 
Sbjct: 585  LISMYFKCGNVD-GLYVFEEMIDRDIVTWNTVLAGCAQNGLCKEATKVFEQMAEAEVFPD 643

Query: 798  DSMFTSALFACANIGAL 848
            +  F   L AC++ G +
Sbjct: 644  EISFLGVLSACSHAGGI 660



 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
 Frame = +3

Query: 396  NMTVRNE----FSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQNGGIHE 563
            + T+RN     F  +  I       R++DA  +++ +P    VS  +M++ Y QN  I +
Sbjct: 18   SQTLRNPQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQNNKIPD 77

Query: 564  ARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQS 743
            A+ LF+     NV TW  +++GYAK G+ +EA   F  MPERN  SW A+++ F Q+G  
Sbjct: 78   AKSLFDAFEYKNVRTWTILLSGYAKAGLIEEAETFFRSMPERNVVSWNAMLAGFVQNGDL 137

Query: 744  EEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHS----------LTIKAGC 893
              A K   E+ +  +    S + S +      G +   R+L            + + +G 
Sbjct: 138  RNARKCFYEMPERNV----SSWNSIITGYCKSGLMKEARELFDRMEERSSVSWMVMASGY 193

Query: 894  QCNSYVGNG----LISMYAKCRNLENVAQV----------------FNTMRVR-----DT 998
               S    G    L+ M +  R  + V  V                F T+ ++     D 
Sbjct: 194  VEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLGMIGSFRTLVMKMGYEEDV 253

Query: 999  VSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAFELF 1160
            V   ++++  ++   LDDA   FE MP R+  S T+MI+A++Q G+   A  L+
Sbjct: 254  VVATAILNAYARCGSLDDAFKFFESMPARNEYSLTSMIAAFSQRGRLDDAIALY 307



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 85/335 (25%), Positives = 152/335 (45%), Gaps = 9/335 (2%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            M  R+  SWN+L++G S +  +++A   F+ M  +D VSW  +IS +VH D+ +  W+LF
Sbjct: 473  MNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRDAVSWAAIISAHVHADQGEIAWQLF 532

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
            L M   GL P+       LSA   L    L      L +K  +   + V  A+++ Y + 
Sbjct: 533  LDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKC 592

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPD----PSVVSRTAML 530
            G ++     FE M  R+  +W+T+++  + +   ++A  V+E + +    P  +S   +L
Sbjct: 593  GNVD-GLYVFEEMIDRDIVTWNTVLAGCAQNGLCKEATKVFEQMAEAEVFPDEISFLGVL 651

Query: 531  TGYAQNGGIHEA----RRLFEEIPNPNVITW-NAMVAGYAKNGMFDEATDMFSRMPERNS 695
            +  +  GGI  A     +  E+  N ++I + N       ++  F E +  F+    RN 
Sbjct: 652  SACSHAGGIVRAWFICIKQTEQAVNHSLIRFMNDGQLPDLRSLPFCEKSHFFANF--RND 709

Query: 696  ASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSL 875
            A    + + F +S       + L +  +  ++  D  F    F+C  I A    RQLH+ 
Sbjct: 710  A--PNVTNGFHESSALLIPGRFLDQFVQR-LLAVDRRFLQPSFSCTEINA---PRQLHNF 763

Query: 876  TIKAGCQCNSYVGNGLISMYAKCRNLENVAQVFNT 980
                     + V + ++ ++AK   LE      NT
Sbjct: 764  I--------AVVESKVLCLFAKSPLLEKYIAEENT 790


>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Brachypodium distachyon]
          Length = 921

 Score =  470 bits (1209), Expect = e-130
 Identities = 234/412 (56%), Positives = 304/412 (73%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MP R+V SWN+++TGY HS QM +A  LF+QM +++LV+W VMISGYV I+++ +GW +F
Sbjct: 152  MPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIF 211

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSR- 359
              MH+ G  PDQS F   LSA+TGL D  ++  LR L +KT +E +VV+GT+ILN Y+R 
Sbjct: 212  RMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRD 271

Query: 360  TGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGY 539
               L++A KFF+ M  RNE++WSTMI+A S   R++ AIAVY   P  S+ S+TA+LTG 
Sbjct: 272  ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGL 331

Query: 540  AQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALIS 719
            A+ G I EAR LFE+IP+P V++WNAM+ GY +NGM DEA ++F RMP RN+ SWA +I+
Sbjct: 332  ARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIA 391

Query: 720  AFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQC 899
             +AQ+G+SEEAL +L  LH++GM+PS S  TS+  AC++IGAL+ GRQ+HSL +KAGCQ 
Sbjct: 392  GYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQF 451

Query: 900  NSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMP 1079
            NSYV N LISMY KCRN+E V QVFN MRV+DTVSWNS I+ L QNNML+DAR IF+ M 
Sbjct: 452  NSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNML 511

Query: 1080 RRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             RDVVSWT +ISAYAQ  +G  A E F  M+    KPNS  +T LL  CG L
Sbjct: 512  SRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563



 Score =  147 bits (371), Expect = 5e-33
 Identities = 87/313 (27%), Positives = 160/313 (51%), Gaps = 32/313 (10%)
 Frame = +3

Query: 318  NVVVGTAILNAYSRTGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIP 497
            +++   ++++AY  +G L  A   F+ ++  N  + + ++S ++   R+ DA  V++ +P
Sbjct: 63   DIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMP 122

Query: 498  DPSVVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSR 677
            + + V+  AM++ Y QNG I  ARRLF+ +P+ +V +WN+MV GY  +    +A ++F +
Sbjct: 123  ERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQ 182

Query: 678  MPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMG 857
            MP+RN  +W  +IS + +  Q  +   +   +H  G  P  S F S L A   +  L + 
Sbjct: 183  MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVL 242

Query: 858  RQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVA-QVFNTMRVRDTVSWNSLISGLSQ 1034
              L  L +K G + +  +G  ++++Y +  +  ++A + F+ M  R+  +W+++I+ LS 
Sbjct: 243  EVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSH 302

Query: 1035 NNMLD-------------------------------DARSIFEKMPRRDVVSWTAMISAY 1121
               +D                               +AR +FE++P   VVSW AMI+ Y
Sbjct: 303  GGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGY 362

Query: 1122 AQTGQGHLAFELF 1160
             Q G    A ELF
Sbjct: 363  MQNGMVDEAKELF 375



 Score =  142 bits (358), Expect = 2e-31
 Identities = 101/447 (22%), Positives = 182/447 (40%), Gaps = 39/447 (8%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            M ERN  +W+T++   SH G++D A  ++ +   K + S   +++G            LF
Sbjct: 285  MVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILF 344

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
             +                      + DP                  VV   A++  Y + 
Sbjct: 345  EQ----------------------IPDPI-----------------VVSWNAMITGYMQN 365

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYE------MIPDPSVVSRT- 521
            G ++ A + F+ M  RN  SW+ MI+ ++ + R E+A+ + +      M+P  S ++ + 
Sbjct: 366  GMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSF 425

Query: 522  --------------------------------AMLTGYAQNGGIHEARRLFEEIPNPNVI 605
                                            A+++ Y +   +   R++F  +   + +
Sbjct: 426  LACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTV 485

Query: 606  TWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSG 785
            +WN+ +A   +N M ++A  +F  M  R+  SW  +ISA+AQ+ + +EA++    +    
Sbjct: 486  SWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEH 545

Query: 786  MVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVA 965
              P+  + T  L  C  +G+  +G+Q+H++ IK G      V N L+SMY KC       
Sbjct: 546  EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG------ 599

Query: 966  QVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHL 1145
                                        D+  +F+ M  RD+ +W   I+  AQ G G  
Sbjct: 600  --------------------------CADSHKVFDSMEERDIFTWNTFITGCAQHGLGRE 633

Query: 1146 AFELFFDMMASGVKPNSSTVTGLLVTC 1226
            A +++  M + GV PN  T  GLL  C
Sbjct: 634  AIKMYEHMESVGVLPNEVTFVGLLNAC 660



 Score =  127 bits (319), Expect = 6e-27
 Identities = 96/421 (22%), Positives = 197/421 (46%), Gaps = 10/421 (2%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MP R++ +WN++++ Y +SG +++A  LF+ +   ++ +  +++SGY  +     G  L 
Sbjct: 59   MPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILLSGYARL-----GRVLD 113

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRT 362
             R  ++G+                                   E N V   A+++ Y + 
Sbjct: 114  ARRVFDGM----------------------------------PERNTVAWNAMVSCYVQN 139

Query: 363  GRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYA 542
            G + +A + F+ M  R+  SW++M++ +  S ++ DA  +++ +P  ++V+ T M++GY 
Sbjct: 140  GDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYV 199

Query: 543  ---QNG-GIHEARRLFEEIPNP---NVITWNAMVAGYAKNGMFDEATDMFSRMP-ERNSA 698
               Q+G G    R +  E  +P   N  +  + V G    G+ +    +  +   E +  
Sbjct: 200  RIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVV 259

Query: 699  SWAALISAFAQSGQS-EEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSL 875
               ++++ + +   + + A+K        GMV  +    S + A  + G    GR   ++
Sbjct: 260  IGTSILNVYTRDASALDIAIKFF-----DGMVERNEYTWSTMIAALSHG----GRIDAAI 310

Query: 876  TIKAGCQCNSYVG-NGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDD 1052
             +       S      L++  A+C  +     +F  +     VSWN++I+G  QN M+D+
Sbjct: 311  AVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDE 370

Query: 1053 ARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGS 1232
            A+ +F++MP R+ +SW  MI+ YAQ G+   A +L   +  +G+ P+ S++T   + C  
Sbjct: 371  AKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSH 430

Query: 1233 L 1235
            +
Sbjct: 431  I 431



 Score =  105 bits (262), Expect = 2e-20
 Identities = 62/235 (26%), Positives = 118/235 (50%)
 Frame = +3

Query: 513  SRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERN 692
            + +A +   A+ G + EAR +F+ +P+ ++I WN+M++ Y  +GM ++A  +F  +   N
Sbjct: 35   AHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGN 94

Query: 693  SASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHS 872
              +   L+S +A+ G+  +A ++       GM   +++  +A+ +C              
Sbjct: 95   VRTATILLSGYARLGRVLDARRVF-----DGMPERNTVAWNAMVSC-------------- 135

Query: 873  LTIKAGCQCNSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDD 1052
                       YV NG I+M           ++F+ M  RD  SWNS+++G   +  + D
Sbjct: 136  -----------YVQNGDITM---------ARRLFDAMPSRDVTSWNSMVTGYCHSRQMVD 175

Query: 1053 ARSIFEKMPRRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLL 1217
            A ++F++MP+R++V+WT MIS Y +  Q    +++F  M   G  P+ S    +L
Sbjct: 176  AWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVL 230


>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
            gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|218190072|gb|EEC72499.1| hypothetical protein
            OsI_05871 [Oryza sativa Indica Group]
            gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
            Japonica Group]
          Length = 922

 Score =  441 bits (1135), Expect = e-121
 Identities = 222/412 (53%), Positives = 294/412 (71%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MP R+V+SWN++LTGY HS QM +A  LFE+M E++LVSW VMISGY  I+ + + W +F
Sbjct: 153  MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSR- 359
             +MH  GLLPDQS F   LSA+ GL +  ++ +LR L++KT +E +VV+GTAILN YSR 
Sbjct: 213  CKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRD 272

Query: 360  TGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGY 539
            T  L+ A KFFE+M  RNE++WSTMI+A S   R++ AIAVYE  P  S+  RTA++TG 
Sbjct: 273  TSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL 332

Query: 540  AQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALIS 719
            AQ G I +AR LFE+IP P V++WNA++ GY +NGM +EA ++F +MP RN+ SWA +I+
Sbjct: 333  AQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 720  AFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQC 899
             +AQ+G+SEEAL +L ELH+SGM+PS S  TS  FAC+NI AL+ G Q+HSL +K GCQ 
Sbjct: 393  GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 900  NSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMP 1079
            NS+  N LI+MY KCRN+E   QVF+ M  +D VSWNS ++ L QN++LD+AR+ F+ M 
Sbjct: 453  NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML 512

Query: 1080 RRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             RD VSWT +ISAYA   Q + A   F  M      PNS  +T LL  CGSL
Sbjct: 513  SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564



 Score =  167 bits (422), Expect = 7e-39
 Identities = 122/472 (25%), Positives = 201/472 (42%), Gaps = 63/472 (13%)
 Frame = +3

Query: 9    ERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFLR 188
            E  V+  +  +      G++ EA  +F+ M  +D+++W  MIS Y H             
Sbjct: 31   ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCH------------- 77

Query: 189  MHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTGR 368
               NG+ PD         A   L D    G +RT             G  +L+ Y R GR
Sbjct: 78   ---NGM-PD---------AARDLYDAISGGNMRT-------------GAILLSGYGRLGR 111

Query: 369  LNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQN 548
            +  A + F+ M  RN  +W+ MIS                                Y QN
Sbjct: 112  VLEARRVFDGMLERNTVAWNAMISC-------------------------------YVQN 140

Query: 549  GGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFA 728
            G I  ARRLF+ +P+ +V +WN+M+ GY  +    +A ++F +MPERN  SW  +IS + 
Sbjct: 141  GDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYG 200

Query: 729  QSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSY 908
            +     +A  +  ++H+ G++P  S F SAL A   +G LD+   L  L +K G + +  
Sbjct: 201  RIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVV 260

Query: 909  VGNGLISMYAKCRN-LENVAQVFNTMRVRDTVSWN------------------------- 1010
            +G  ++++Y++  + L+   + F +M  R+  +W+                         
Sbjct: 261  IGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK 320

Query: 1011 ------SLISGLSQNNMLDDARSIFE-------------------------------KMP 1079
                  +LI+GL+Q   +DDAR +FE                               KMP
Sbjct: 321  SIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 1080 RRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             R+ +SW  MI+ YAQ G+   A  L  ++  SG+ P+ S++T +   C ++
Sbjct: 381  FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI 432



 Score =  164 bits (414), Expect = 6e-38
 Identities = 122/446 (27%), Positives = 198/446 (44%), Gaps = 40/446 (8%)
 Frame = +3

Query: 9    ERNVASWNTLLTGYSH-SGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFL 185
            ER+V     +L  YS  +  +D A   FE M E++  +W  MI+   H    D    ++ 
Sbjct: 256  ERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE 315

Query: 186  RMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTG 365
            R       P +SI   T + ITGL     I   R L  +   E  VV   A++  Y + G
Sbjct: 316  RD------PVKSIACRT-ALITGLAQCGRIDDARIL-FEQIPEPIVVSWNALITGYMQNG 367

Query: 366  RLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYE------MIPDPSVVSR--- 518
             +N A + F+ M  RN  SW+ MI+ ++ + R E+A+ + +      M+P  S ++    
Sbjct: 368  MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFF 427

Query: 519  ------------------------------TAMLTGYAQNGGIHEARRLFEEIPNPNVIT 608
                                           A++T Y +   +  AR++F  +   ++++
Sbjct: 428  ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 609  WNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGM 788
            WN+ +A   +N + DEA + F  M  R+  SW  +ISA+A + QS EA+     +     
Sbjct: 488  WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 789  VPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQ 968
            +P+  + T  L  C ++GA  +G+Q+H++ IK G      V N LISMY KC    +  +
Sbjct: 548  LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC-GCADSRR 606

Query: 969  VFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLA 1148
            +F+ M  RD  +WN++I+G                               YAQ G G  A
Sbjct: 607  IFDLMEERDIFTWNTIITG-------------------------------YAQHGLGREA 635

Query: 1149 FELFFDMMASGVKPNSSTVTGLLVTC 1226
             +++  M ++GV PN  T  GLL  C
Sbjct: 636  IKMYQHMESAGVLPNEVTFVGLLNAC 661


>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  441 bits (1135), Expect = e-121
 Identities = 222/412 (53%), Positives = 294/412 (71%), Gaps = 1/412 (0%)
 Frame = +3

Query: 3    MPERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLF 182
            MP R+V+SWN++LTGY HS QM +A  LFE+M E++LVSW VMISGY  I+ + + W +F
Sbjct: 153  MPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIF 212

Query: 183  LRMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSR- 359
             +MH  GLLPDQS F   LSA+ GL +  ++ +LR L++KT +E +VV+GTAILN YSR 
Sbjct: 213  CKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRD 272

Query: 360  TGRLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGY 539
            T  L+ A KFFE+M  RNE++WSTMI+A S   R++ AIAVYE  P  S+  RTA++TG 
Sbjct: 273  TSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGL 332

Query: 540  AQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALIS 719
            AQ G I +AR LFE+IP P V++WNA++ GY +NGM +EA ++F +MP RN+ SWA +I+
Sbjct: 333  AQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 720  AFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQC 899
             +AQ+G+SEEAL +L ELH+SGM+PS S  TS  FAC+NI AL+ G Q+HSL +K GCQ 
Sbjct: 393  GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 900  NSYVGNGLISMYAKCRNLENVAQVFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMP 1079
            NS+  N LI+MY KCRN+E   QVF+ M  +D VSWNS ++ L QN++LD+AR+ F+ M 
Sbjct: 453  NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML 512

Query: 1080 RRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             RD VSWT +ISAYA   Q + A   F  M      PNS  +T LL  CGSL
Sbjct: 513  SRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSL 564



 Score =  167 bits (422), Expect = 7e-39
 Identities = 122/472 (25%), Positives = 201/472 (42%), Gaps = 63/472 (13%)
 Frame = +3

Query: 9    ERNVASWNTLLTGYSHSGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFLR 188
            E  V+  +  +      G++ EA  +F+ M  +D+++W  MIS Y H             
Sbjct: 31   ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCH------------- 77

Query: 189  MHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTGR 368
               NG+ PD         A   L D    G +RT             G  +L+ Y R GR
Sbjct: 78   ---NGM-PD---------AARDLYDAISGGNMRT-------------GAILLSGYGRLGR 111

Query: 369  LNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSVVSRTAMLTGYAQN 548
            +  A + F+ M  RN  +W+ MIS                                Y QN
Sbjct: 112  VLEARRVFDGMLERNTVAWNAMISC-------------------------------YVQN 140

Query: 549  GGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFA 728
            G I  ARRLF+ +P+ +V +WN+M+ GY  +    +A ++F +MPERN  SW  +IS + 
Sbjct: 141  GDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYG 200

Query: 729  QSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSY 908
            +     +A  +  ++H+ G++P  S F SAL A   +G LD+   L  L +K G + +  
Sbjct: 201  RIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVV 260

Query: 909  VGNGLISMYAKCRN-LENVAQVFNTMRVRDTVSWN------------------------- 1010
            +G  ++++Y++  + L+   + F +M  R+  +W+                         
Sbjct: 261  IGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK 320

Query: 1011 ------SLISGLSQNNMLDDARSIFE-------------------------------KMP 1079
                  +LI+GL+Q   +DDAR +FE                               KMP
Sbjct: 321  SIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 1080 RRDVVSWTAMISAYAQTGQGHLAFELFFDMMASGVKPNSSTVTGLLVTCGSL 1235
             R+ +SW  MI+ YAQ G+   A  L  ++  SG+ P+ S++T +   C ++
Sbjct: 381  FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNI 432



 Score =  164 bits (414), Expect = 6e-38
 Identities = 122/446 (27%), Positives = 198/446 (44%), Gaps = 40/446 (8%)
 Frame = +3

Query: 9    ERNVASWNTLLTGYSH-SGQMDEACWLFEQMREKDLVSWMVMISGYVHIDEYDRGWKLFL 185
            ER+V     +L  YS  +  +D A   FE M E++  +W  MI+   H    D    ++ 
Sbjct: 256  ERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE 315

Query: 186  RMHYNGLLPDQSIFVVTLSAITGLNDPFLIGTLRTLSIKTSYEENVVVGTAILNAYSRTG 365
            R       P +SI   T + ITGL     I   R L  +   E  VV   A++  Y + G
Sbjct: 316  RD------PVKSIACRT-ALITGLAQCGRIDDARIL-FEQIPEPIVVSWNALITGYMQNG 367

Query: 366  RLNLACKFFENMTVRNEFSWSTMISAFSWSNRLEDAIAVYE------MIPDPSVVSR--- 518
             +N A + F+ M  RN  SW+ MI+ ++ + R E+A+ + +      M+P  S ++    
Sbjct: 368  MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFF 427

Query: 519  ------------------------------TAMLTGYAQNGGIHEARRLFEEIPNPNVIT 608
                                           A++T Y +   +  AR++F  +   ++++
Sbjct: 428  ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 609  WNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGM 788
            WN+ +A   +N + DEA + F  M  R+  SW  +ISA+A + QS EA+     +     
Sbjct: 488  WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 789  VPSDSMFTSALFACANIGALDMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVAQ 968
            +P+  + T  L  C ++GA  +G+Q+H++ IK G      V N LISMY KC    +  +
Sbjct: 548  LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC-GCADSRR 606

Query: 969  VFNTMRVRDTVSWNSLISGLSQNNMLDDARSIFEKMPRRDVVSWTAMISAYAQTGQGHLA 1148
            +F+ M  RD  +WN++I+G                               YAQ G G  A
Sbjct: 607  IFDLMEERDIFTWNTIITG-------------------------------YAQHGLGREA 635

Query: 1149 FELFFDMMASGVKPNSSTVTGLLVTC 1226
             +++  M ++GV PN  T  GLL  C
Sbjct: 636  IKMYQHMESAGVLPNEVTFVGLLNAC 661