BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003165
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro...   426   e-117
ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7...   423   e-116
ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7...   423   e-116
ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7...   421   e-115
ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7...   421   e-115

>sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
            AltName: Full=LHCI type II CAB; Flags: Precursor
            gi|169214|gb|AAA33711.1| chlorophyll binding protein
            precursor [Petunia x hybrida] gi|226259|prf||1503272A
            chlorophyll binding protein
          Length = 270

 Score =  426 bits (1095), Expect = e-117
 Identities = 197/242 (81%), Positives = 215/242 (88%)
 Frame = -3

Query: 1014 ATKASFLVGRKLKQTKFVASAGPSTFSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 835
            ATKASFL G++L+ +KF+A  G  + +V A AA+ DRPLWFPGSTPP WLDGSLPGDFGF
Sbjct: 29   ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88

Query: 834  DPLGLGSDPETLRWNAQSELVHSRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 655
            DPLGLGSDPE+L+WNAQ+ELVHSRWAMLGAAGIFIPE LTK GVLNTPSWY+AGEQEYFT
Sbjct: 89   DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148

Query: 654  DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 475
            DTTTLF++E++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G
Sbjct: 149  DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 474  SGSAXXXXXXXXXXXKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 295
            SGS            KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AF+
Sbjct: 209  SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268

Query: 294  PK 289
            PK
Sbjct: 269  PK 270


>ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            isoform 2 [Glycine max]
          Length = 281

 Score =  423 bits (1087), Expect = e-116
 Identities = 198/242 (81%), Positives = 208/242 (85%)
 Frame = -3

Query: 1014 ATKASFLVGRKLKQTKFVASAGPSTFSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 835
            +TKASFL GRKLK   F A  G  + +   A AE DRPLWFPGSTPPPWLDGSLPGDFGF
Sbjct: 40   STKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 99

Query: 834  DPLGLGSDPETLRWNAQSELVHSRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 655
            DPLGLGSDPE+LRWN Q+ELVH RWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT
Sbjct: 100  DPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 159

Query: 654  DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 475
            DTTTLF+VE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G
Sbjct: 160  DTTTLFVVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 219

Query: 474  SGSAXXXXXXXXXXXKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 295
            SGS            KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT
Sbjct: 220  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 279

Query: 294  PK 289
            PK
Sbjct: 280  PK 281


>ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            isoform 1 [Glycine max]
          Length = 270

 Score =  423 bits (1087), Expect = e-116
 Identities = 198/242 (81%), Positives = 208/242 (85%)
 Frame = -3

Query: 1014 ATKASFLVGRKLKQTKFVASAGPSTFSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 835
            +TKASFL GRKLK   F A  G  + +   A AE DRPLWFPGSTPPPWLDGSLPGDFGF
Sbjct: 29   STKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 88

Query: 834  DPLGLGSDPETLRWNAQSELVHSRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 655
            DPLGLGSDPE+LRWN Q+ELVH RWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT
Sbjct: 89   DPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 148

Query: 654  DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 475
            DTTTLF+VE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G
Sbjct: 149  DTTTLFVVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 474  SGSAXXXXXXXXXXXKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 295
            SGS            KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT
Sbjct: 209  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 268

Query: 294  PK 289
            PK
Sbjct: 269  PK 270


>ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            isoform 2 [Glycine max]
          Length = 281

 Score =  421 bits (1082), Expect = e-115
 Identities = 198/242 (81%), Positives = 207/242 (85%)
 Frame = -3

Query: 1014 ATKASFLVGRKLKQTKFVASAGPSTFSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 835
            +TKASFL GRKLK   F A  G  + +   A AE DRPLWFPGSTPPPWLDGSLPGDFGF
Sbjct: 40   STKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 99

Query: 834  DPLGLGSDPETLRWNAQSELVHSRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 655
            DPLGL SDPE+LRWN Q+ELVH RWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT
Sbjct: 100  DPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 159

Query: 654  DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 475
            DTTTLFIVE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G
Sbjct: 160  DTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 219

Query: 474  SGSAXXXXXXXXXXXKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 295
            SGS            KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT
Sbjct: 220  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 279

Query: 294  PK 289
            PK
Sbjct: 280  PK 281


>ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
            isoform 1 [Glycine max] gi|255645717|gb|ACU23352.1|
            unknown [Glycine max]
          Length = 270

 Score =  421 bits (1082), Expect = e-115
 Identities = 198/242 (81%), Positives = 207/242 (85%)
 Frame = -3

Query: 1014 ATKASFLVGRKLKQTKFVASAGPSTFSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 835
            +TKASFL GRKLK   F A  G  + +   A AE DRPLWFPGSTPPPWLDGSLPGDFGF
Sbjct: 29   STKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 88

Query: 834  DPLGLGSDPETLRWNAQSELVHSRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 655
            DPLGL SDPE+LRWN Q+ELVH RWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT
Sbjct: 89   DPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 148

Query: 654  DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 475
            DTTTLFIVE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G
Sbjct: 149  DTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208

Query: 474  SGSAXXXXXXXXXXXKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 295
            SGS            KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT
Sbjct: 209  SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 268

Query: 294  PK 289
            PK
Sbjct: 269  PK 270