BLASTX nr result

ID: Coptis23_contig00003152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003152
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278843.1| PREDICTED: l-2-hydroxyglutarate dehydrogenas...   305   1e-80
ref|XP_002308844.1| predicted protein [Populus trichocarpa] gi|2...   298   7e-79
ref|XP_003525735.1| PREDICTED: l-2-hydroxyglutarate dehydrogenas...   293   4e-77
ref|XP_003618905.1| L-2-hydroxyglutarate dehydrogenase [Medicago...   290   3e-76
gb|ACD56607.1| putative oxidoreductase protein [Gossypioides kir...   290   3e-76

>ref|XP_002278843.1| PREDICTED: l-2-hydroxyglutarate dehydrogenase, mitochondrial [Vitis
           vinifera] gi|297741744|emb|CBI32876.3| unnamed protein
           product [Vitis vinifera]
          Length = 424

 Score =  305 bits (780), Expect = 1e-80
 Identities = 160/254 (62%), Positives = 193/254 (75%), Gaps = 1/254 (0%)
 Frame = +2

Query: 62  MLRRTLKCCTSSV-WIQSRKLTIPSQSLLLEAIPKENVDCXXXXXXXXXXXXXRDLALKG 238
           MLR  ++   +S  WI S+  T  S+  +  A+ +E+VDC             R+LALKG
Sbjct: 1   MLRHAIRGLRNSRRWISSKNFT--SRVGVERAVARESVDCVVIGAGVVGIAVARELALKG 58

Query: 239 RDVLVVESAPTFGSGTSSRNSEVIHAGIYYPPNSLKAIFCIRGRKLLYQYCANHGVPHKQ 418
           R+V+V+E A TFG+GTSSRNSEVIHAGIYYP NSLKAIFC RGR+LLY+YC+ H VPHKQ
Sbjct: 59  REVVVIEFASTFGTGTSSRNSEVIHAGIYYPRNSLKAIFCARGRELLYKYCSEHEVPHKQ 118

Query: 419 IGKLIVATGSSEIQKLIVLLRRGRENGVEGLRMMEGFEAMRMEPELKCLKALLSPYSGIV 598
           IGKLIVAT SSE+ KL  L+ RG ENGV+GLRM+EGFEAM MEPEL+C++ALLSP SGIV
Sbjct: 119 IGKLIVATRSSEVPKLNDLMIRGNENGVDGLRMLEGFEAMEMEPELQCVRALLSPASGIV 178

Query: 599 DTHALMLSLVGEAENHGATFSYNTTVVGGHLEGDSIQIHISQCKNIEKCIGGCPPQPELI 778
           DTH+LMLSLVGEAENH  TF YNT V+GGHLEGD I +HIS+ K++E      P  PE+I
Sbjct: 179 DTHSLMLSLVGEAENHRTTFCYNTAVIGGHLEGDHICLHISESKDLENWDRRFPLHPEVI 238

Query: 779 LVPNLVVNSAGLSS 820
           L+  LVVNSAGLS+
Sbjct: 239 LMAKLVVNSAGLSA 252


>ref|XP_002308844.1| predicted protein [Populus trichocarpa] gi|222854820|gb|EEE92367.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  298 bits (764), Expect = 7e-79
 Identities = 152/253 (60%), Positives = 193/253 (76%), Gaps = 1/253 (0%)
 Frame = +2

Query: 65  LRRTLKCCTSSVWI-QSRKLTIPSQSLLLEAIPKENVDCXXXXXXXXXXXXXRDLALKGR 241
           L++TL+    +  I +++ +   S  +  E +P E +DC             R+LA KGR
Sbjct: 5   LKQTLQSLKRTATISKAQAIKNLSTQIKKEDVPTEKLDCVVIGAGVVGIAIARELASKGR 64

Query: 242 DVLVVESAPTFGSGTSSRNSEVIHAGIYYPPNSLKAIFCIRGRKLLYQYCANHGVPHKQI 421
           +VLV++SA TFG+GTSSRNSEVIHAGIYYPP+SLKA+FC+RGR+LLY+YC  HGVP KQI
Sbjct: 65  EVLVLDSASTFGTGTSSRNSEVIHAGIYYPPDSLKALFCVRGRELLYRYCYEHGVPCKQI 124

Query: 422 GKLIVATGSSEIQKLIVLLRRGRENGVEGLRMMEGFEAMRMEPELKCLKALLSPYSGIVD 601
           GKLIVATG  EI KL  L+ RG +NGV+ L+M+EGFEAM+MEPEL+C KALLSP SGIVD
Sbjct: 125 GKLIVATGPLEISKLNELMDRGTQNGVDNLKMLEGFEAMKMEPELQCKKALLSPVSGIVD 184

Query: 602 THALMLSLVGEAENHGATFSYNTTVVGGHLEGDSIQIHISQCKNIEKCIGGCPPQPELIL 781
           +H+LMLSLVGEAEN+G TFSYN+TV+ GHLEG+ + ++I + K++E   G  P  PEL+L
Sbjct: 185 SHSLMLSLVGEAENNGTTFSYNSTVISGHLEGNCLHLYIVESKDLENWNGDYPLHPELVL 244

Query: 782 VPNLVVNSAGLSS 820
           VP LVVNSAGLSS
Sbjct: 245 VPKLVVNSAGLSS 257


>ref|XP_003525735.1| PREDICTED: l-2-hydroxyglutarate dehydrogenase, mitochondrial-like
           [Glycine max]
          Length = 410

 Score =  293 bits (749), Expect = 4e-77
 Identities = 142/224 (63%), Positives = 179/224 (79%)
 Frame = +2

Query: 149 EAIPKENVDCXXXXXXXXXXXXXRDLALKGRDVLVVESAPTFGSGTSSRNSEVIHAGIYY 328
           +++PKE V+C             R LALKGR+VLVVESAPTFG+GTSSRNSEVIHAGIYY
Sbjct: 16  DSVPKERVECVVIGAGVVGIAVARALALKGREVLVVESAPTFGTGTSSRNSEVIHAGIYY 75

Query: 329 PPNSLKAIFCIRGRKLLYQYCANHGVPHKQIGKLIVATGSSEIQKLIVLLRRGRENGVEG 508
           P NS KAIFC+RGR++LY+YC+ H +PHKQIGKLIVAT SSEI KL  +L  G +NGV+G
Sbjct: 76  PLNSFKAIFCVRGREMLYEYCSKHDIPHKQIGKLIVATRSSEIPKLNDILNCGIQNGVDG 135

Query: 509 LRMMEGFEAMRMEPELKCLKALLSPYSGIVDTHALMLSLVGEAENHGATFSYNTTVVGGH 688
           L++++G EAM+MEPEL+C+KA+LSP +GIVD+H+LMLSLVGEAEN G TF+YN+TV+GGH
Sbjct: 136 LKIVDGVEAMKMEPELQCVKAILSPLTGIVDSHSLMLSLVGEAENQGTTFTYNSTVIGGH 195

Query: 689 LEGDSIQIHISQCKNIEKCIGGCPPQPELILVPNLVVNSAGLSS 820
           LEG  I +H+++   + +  G    QPEL+L+P LVVNS GLSS
Sbjct: 196 LEGSEICLHVTETDRLTEWKGTSILQPELLLIPKLVVNSTGLSS 239


>ref|XP_003618905.1| L-2-hydroxyglutarate dehydrogenase [Medicago truncatula]
           gi|355493920|gb|AES75123.1| L-2-hydroxyglutarate
           dehydrogenase [Medicago truncatula]
          Length = 483

 Score =  290 bits (741), Expect = 3e-76
 Identities = 142/248 (57%), Positives = 186/248 (75%), Gaps = 25/248 (10%)
 Frame = +2

Query: 152 AIPKENVDCXXXXXXXXXXXXXRDLALKGRDVLVVESAPTFGSGTSSRNSEVIHAGIYYP 331
           ++P+E VDC             R LALKGR+V+V+ESAP+FG+GTSSRNSEV+HAGIYYP
Sbjct: 65  SVPRERVDCVVIGAGVVGIAVARALALKGREVIVIESAPSFGTGTSSRNSEVVHAGIYYP 124

Query: 332 PNSLKAIFCIRGRKLLYQYCANHGVPHKQIGKLIVATGSSEIQKLIVLLRRGRENGVEGL 511
            +SLKAIFC++GR++LY+YCA H +PH+Q GKLIVAT SSEI KL V+L  G +NGV+GL
Sbjct: 125 HHSLKAIFCVKGREMLYEYCAKHDIPHEQTGKLIVATRSSEIPKLSVILNHGIQNGVDGL 184

Query: 512 RMMEGFEAMRMEPELKCLKALLSPYSGIVDTHALMLSLV--------------------- 628
           +MM+G +AM+MEPEL+C+KA+LSP SGIVD+H+LMLSLV                     
Sbjct: 185 KMMDGVDAMKMEPELQCVKAILSPLSGIVDSHSLMLSLVVCISSFYYHVVKLDLVLNINP 244

Query: 629 ----GEAENHGATFSYNTTVVGGHLEGDSIQIHISQCKNIEKCIGGCPPQPELILVPNLV 796
               GEAENHGATF+YN+TV+GGH+EG+ I +H+S+ K++++  G    QPEL+L+P LV
Sbjct: 245 MLVQGEAENHGATFTYNSTVIGGHMEGNEICLHVSETKSLKEWNGKSSLQPELVLIPKLV 304

Query: 797 VNSAGLSS 820
           VNSAGLS+
Sbjct: 305 VNSAGLSA 312


>gb|ACD56607.1| putative oxidoreductase protein [Gossypioides kirkii]
          Length = 423

 Score =  290 bits (741), Expect = 3e-76
 Identities = 142/241 (58%), Positives = 180/241 (74%)
 Frame = +2

Query: 98  VWIQSRKLTIPSQSLLLEAIPKENVDCXXXXXXXXXXXXXRDLALKGRDVLVVESAPTFG 277
           V +  R+  +P  S      PKE  +C             R+L+LKG++VLV++SAPTFG
Sbjct: 7   VRVIKRRFHLPKPSETWRNAPKEKAECVVIGAGIVGLAVARELSLKGKEVLVLDSAPTFG 66

Query: 278 SGTSSRNSEVIHAGIYYPPNSLKAIFCIRGRKLLYQYCANHGVPHKQIGKLIVATGSSEI 457
           + TSSRNSEVIHAGIYYP NSLKA FC+RGRKLLY YC+  G+PH QIGKLIVATG+SEI
Sbjct: 67  TATSSRNSEVIHAGIYYPSNSLKARFCVRGRKLLYHYCSQRGIPHNQIGKLIVATGTSEI 126

Query: 458 QKLIVLLRRGRENGVEGLRMMEGFEAMRMEPELKCLKALLSPYSGIVDTHALMLSLVGEA 637
            KL  L  RG +NGVE LRM++  EA++MEPEL C+KALLSP SGI+D+H+LMLSLVGEA
Sbjct: 127 PKLNQLFNRGIQNGVENLRMLDASEAIKMEPELHCVKALLSPASGILDSHSLMLSLVGEA 186

Query: 638 ENHGATFSYNTTVVGGHLEGDSIQIHISQCKNIEKCIGGCPPQPELILVPNLVVNSAGLS 817
           E +GATFSYNT V+GGHLEG+ + +H+ + K +    G  P QP+L+L+P +VVNS+GLS
Sbjct: 187 ETNGATFSYNTAVIGGHLEGNQMVLHVCETKTLGNWDGNTPLQPDLLLMPQIVVNSSGLS 246

Query: 818 S 820
           +
Sbjct: 247 A 247


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