BLASTX nr result

ID: Coptis23_contig00003150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003150
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326289.1| copper transporter [Populus trichocarpa] gi|...   166   3e-39
ref|XP_002278146.1| PREDICTED: copper transporter 5 [Vitis vinif...   165   7e-39
ref|XP_004144217.1| PREDICTED: copper transporter 5-like [Cucumi...   161   1e-37
ref|XP_002516262.1| copper transporter, putative [Ricinus commun...   158   9e-37
ref|XP_003603232.1| Copper transporter [Medicago truncatula] gi|...   157   2e-36

>ref|XP_002326289.1| copper transporter [Populus trichocarpa]
           gi|222833482|gb|EEE71959.1| copper transporter [Populus
           trichocarpa]
          Length = 141

 Score =  166 bits (421), Expect = 3e-39
 Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
 Frame = +3

Query: 69  MMHMTFYWGINVTILFNSWKTDSYLNYSLSLLVCFLFSIFYQYMEDR--RXXXXXXXXXX 242
           MMHMT YWGI VT+LF+ WKTDS+ +Y LSLL CFLFS FYQY+EDR  R          
Sbjct: 1   MMHMTLYWGIKVTLLFDCWKTDSWFSYLLSLLACFLFSAFYQYLEDRRIRFKAIAVSNPS 60

Query: 243 XXXXXLETPFLTRLSFKTKPARLASAVLFGVNSAIGYFLMLAIMSFNWGVFIAIVLGLSV 422
                +  P LT    +   A+ A+A+LFG+N+AIGY LMLAIMSFN GVF+AIVLGL+V
Sbjct: 61  QQPPPVNAPLLTP-KRRASSAKFATALLFGINAAIGYLLMLAIMSFNGGVFLAIVLGLTV 119

Query: 423 GYLVFRSGDDDDEVVVLDNSCACA 494
           GY++FRSG  D+EVVV+DN+CACA
Sbjct: 120 GYVLFRSG--DEEVVVVDNTCACA 141


>ref|XP_002278146.1| PREDICTED: copper transporter 5 [Vitis vinifera]
           gi|297738552|emb|CBI27797.3| unnamed protein product
           [Vitis vinifera] gi|321496070|gb|ADW93912.1| copper
           transporter [Vitis vinifera]
          Length = 148

 Score =  165 bits (418), Expect = 7e-39
 Identities = 89/150 (59%), Positives = 106/150 (70%), Gaps = 8/150 (5%)
 Frame = +3

Query: 69  MMHMTFYWGINVTILFNSWKTDSYLNYSLSLLVCFLFSIFYQYMEDRRXXXXXXXXXXXX 248
           MMHMT YWG  VT+LF+SWKTDS+ +Y+LSLL CFLFS+FYQ MEDRR            
Sbjct: 1   MMHMTLYWGTQVTLLFSSWKTDSWPSYALSLLACFLFSVFYQNMEDRRLRFKTLASTPAA 60

Query: 249 XXXLETPFLTRLSFKT--------KPARLASAVLFGVNSAIGYFLMLAIMSFNWGVFIAI 404
               ++   T L FK          P+R+A AVLFGVNSAIGY LMLAIMSFN GVF+AI
Sbjct: 61  APPSQSA-ATFLLFKLGRGRTRWGNPSRIAEAVLFGVNSAIGYLLMLAIMSFNGGVFVAI 119

Query: 405 VLGLSVGYLVFRSGDDDDEVVVLDNSCACA 494
           VLGLSVGY +FR+G D +EVV ++NSCAC+
Sbjct: 120 VLGLSVGYYLFRNG-DQEEVVEVENSCACS 148


>ref|XP_004144217.1| PREDICTED: copper transporter 5-like [Cucumis sativus]
           gi|449489282|ref|XP_004158267.1| PREDICTED: copper
           transporter 5-like isoform 1 [Cucumis sativus]
           gi|449489286|ref|XP_004158268.1| PREDICTED: copper
           transporter 5-like isoform 2 [Cucumis sativus]
          Length = 142

 Score =  161 bits (407), Expect = 1e-37
 Identities = 82/143 (57%), Positives = 101/143 (70%), Gaps = 1/143 (0%)
 Frame = +3

Query: 69  MMHMTFYWGINVTILFNSWKTDSYLNYSLSLLVCFLFSIFYQYMEDRRXXXXXXXXXXXX 248
           MMHMTFYW   VT+L NSW+T S+ +YSLSLL CF+ SIFYQY+E+ R            
Sbjct: 1   MMHMTFYWSREVTLLINSWRTTSWFSYSLSLLACFIVSIFYQYLENYRIRLKLLQCPKPS 60

Query: 249 XXXLETPFL-TRLSFKTKPARLASAVLFGVNSAIGYFLMLAIMSFNWGVFIAIVLGLSVG 425
              +E P L ++++ K +  R A A+ FGVNSAIGY LMLAIMSFN GVFIAIV GL++G
Sbjct: 61  PSEIEAPLLRSKVAGKFQAVRFAGALFFGVNSAIGYLLMLAIMSFNGGVFIAIVFGLAIG 120

Query: 426 YLVFRSGDDDDEVVVLDNSCACA 494
           YLVFRS DD+D +V  +N CACA
Sbjct: 121 YLVFRS-DDEDVIVSAENPCACA 142


>ref|XP_002516262.1| copper transporter, putative [Ricinus communis]
           gi|223544748|gb|EEF46264.1| copper transporter, putative
           [Ricinus communis]
          Length = 144

 Score =  158 bits (400), Expect = 9e-37
 Identities = 85/146 (58%), Positives = 101/146 (69%), Gaps = 4/146 (2%)
 Frame = +3

Query: 69  MMHMTFYWGINVTILFNSWKTDSYLNYSLSLLVCFLFSIFYQYMEDRR---XXXXXXXXX 239
           MMHMT YWGI VT+LF+SWKTDS+ +Y LSLL CFLFS FYQYMEDRR            
Sbjct: 1   MMHMTLYWGIKVTLLFDSWKTDSWPSYLLSLLACFLFSSFYQYMEDRRIKFKSLAAASAA 60

Query: 240 XXXXXXLETPFLTRLSF-KTKPARLASAVLFGVNSAIGYFLMLAIMSFNWGVFIAIVLGL 416
                 +  P L      +   A+ A+A+LFG NSAIGY LMLAIMSFN GVF+A V GL
Sbjct: 61  TSQPSSVTVPLLRSSKLGRFSSAKFAAAILFGFNSAIGYLLMLAIMSFNGGVFLATVAGL 120

Query: 417 SVGYLVFRSGDDDDEVVVLDNSCACA 494
           SVGYLVFRS  +D++VVV+++ CACA
Sbjct: 121 SVGYLVFRS--EDEQVVVIEDPCACA 144


>ref|XP_003603232.1| Copper transporter [Medicago truncatula]
           gi|355492280|gb|AES73483.1| Copper transporter [Medicago
           truncatula] gi|388514357|gb|AFK45240.1| unknown
           [Medicago truncatula]
          Length = 143

 Score =  157 bits (397), Expect = 2e-36
 Identities = 81/145 (55%), Positives = 104/145 (71%), Gaps = 3/145 (2%)
 Frame = +3

Query: 69  MMHMTFYWGINVTILFNSWKTDSYLNYSLSLLVCFLFSIFYQYMEDRRXXXXXXXXXXXX 248
           MMHMTFYW   VT+LF+SWKTDS+ +Y+LSLL C + SIFYQ++E+RR            
Sbjct: 1   MMHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPF 60

Query: 249 XXXLETPFLTRL---SFKTKPARLASAVLFGVNSAIGYFLMLAIMSFNWGVFIAIVLGLS 419
              +E P L R    S      R+A AVLFG++SAIGYFLML++MS+N GVFIAIV+GL+
Sbjct: 61  PAAIEAPLLRRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLA 120

Query: 420 VGYLVFRSGDDDDEVVVLDNSCACA 494
           VGYL+FRS  D ++ VV+D+SCACA
Sbjct: 121 VGYLLFRS--DGEDSVVVDSSCACA 143


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