BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003146
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japo...    75   5e-12
ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis ...    66   4e-09
ref|XP_003535147.1| PREDICTED: transcription factor GAMYB-like [...    65   8e-09
ref|XP_003554391.1| PREDICTED: uncharacterized protein LOC778084...    62   5e-08

>ref|XP_002322912.1| predicted protein [Populus trichocarpa] gi|222867542|gb|EEF04673.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
 Frame = -2

Query: 460 VPLDSYFYNNGVEESQKFLLGGSS------NGWTERQQGLWGEASLDFGVEEIKQLVTTN 299
           V L +Y +N  VE+ QK ++          NGWT +Q GLW E  LD+G+EEIKQL++T+
Sbjct: 254 VGLQNYLHNR-VEDDQKLMVSSGFAGHDVLNGWTGKQIGLWEENPLDYGLEEIKQLISTS 312

Query: 298 YSSHFFFDESKTQEKAMYY 242
             ++F FDE+KT EKAMYY
Sbjct: 313 SCNNFLFDENKTAEKAMYY 331


>gb|AFK29431.1| R2R3MYB transcription factor, partial [Lotus japonicus]
          Length = 224

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = -2

Query: 445 YFYNNGVEESQKFLL--GGSSNGWTERQQGLWGEASLDFGVEEIKQLVTTNYSSHFFFDE 272
           Y YN GVE++QK +   G   +GWTE+Q GLW E  +D G+EEIK+L++T+  ++F F +
Sbjct: 156 YLYN-GVEDTQKLMFNNGDGVSGWTEKQNGLWEENPMDNGLEEIKELISTSSCNNFLFGD 214

Query: 271 SKTQEKAMYY 242
            KT+EK MYY
Sbjct: 215 KKTEEKVMYY 224


>ref|XP_002270359.1| PREDICTED: transcription factor RAX1 [Vitis vinifera]
           gi|297739959|emb|CBI30141.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
 Frame = -2

Query: 448 SYFYNNGVEESQKFLL--------GGSSNGWTE-RQQGLWGEASLDFGVEEIKQLVTTNY 296
           +Y Y    +++Q+F++        G  S+GWT+ R  G+ GE  LD G+EE KQL++ N 
Sbjct: 265 NYVYTGLDDQNQRFMISNSSGGGGGSGSHGWTDQRPNGMLGEPPLDLGLEEFKQLISANL 324

Query: 295 SSHFFFDESKTQEKAMYY 242
            ++F FDE+KT+E+ +YY
Sbjct: 325 CNNFSFDENKTEERVVYY 342


>ref|XP_003535147.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 320

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/72 (44%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
 Frame = -2

Query: 442 FYNNGVE--ESQKFL---LGGSSNGWTERQQGLWGEASLDFGVEEIKQLVTTNYSSHFFF 278
           + N+GVE  ++QK +    G  ++G T+ +  LWGE+ L++G+EEIKQL++T+  ++F  
Sbjct: 249 YLNSGVELEDTQKLVPSNAGKVNSGVTDEESRLWGESPLEYGLEEIKQLISTSSCNNFML 308

Query: 277 DESKTQEKAMYY 242
           D+SKT E AMYY
Sbjct: 309 DDSKTGEMAMYY 320


>ref|XP_003554391.1| PREDICTED: uncharacterized protein LOC778084 [Glycine max]
          Length = 304

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/54 (51%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
 Frame = -2

Query: 397 GSSNGWTERQQGL-WGEASLDFGVEEIKQLVTTNYS-SHFFFDESKTQEKAMYY 242
           GS +GWT++Q GL W +  LD+G++EIKQL++TN S ++F FD+ KTQE+  Y+
Sbjct: 251 GSVSGWTDKQNGLLWEQNPLDYGLDEIKQLISTNNSCNNFLFDDKKTQERVTYF 304