BLASTX nr result

ID: Coptis23_contig00003128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003128
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284032.1| PREDICTED: uncharacterized protein LOC100249...   120   9e-26
emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]    97   2e-18
ref|XP_002299733.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002515984.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
ref|XP_003627001.1| hypothetical protein MTR_8g013930 [Medicago ...    75   7e-12

>ref|XP_002284032.1| PREDICTED: uncharacterized protein LOC100249817 [Vitis vinifera]
           gi|297743214|emb|CBI36081.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/113 (56%), Positives = 84/113 (74%), Gaps = 2/113 (1%)
 Frame = -3

Query: 409 MAHLCCSIEMEPRTLNEGQLNHAREAAVDIIQKMNSVESSNAFIEGLKPVVPIEEMEQI- 233
           MA +CCSIEMEPRTLNEGQL+HAREAAVDI+QKM   E+SN F +G++ VV ++EMEQ+ 
Sbjct: 1   MAKVCCSIEMEPRTLNEGQLHHAREAAVDIVQKMEPKEASNVFADGMRQVVTVKEMEQLE 60

Query: 232 -VERRHQIQKLTVDCKETIVPAVDPFYDCACITPSVVDSPDLAPIREPLSAPF 77
            +  + Q++KL  +C ET  PA+     C+C  P+ ++SPD A  REPLSAPF
Sbjct: 61  QMAEKEQLEKL-AECNET-APAIGGPCQCSCF-PTNLESPDQAGPREPLSAPF 110


>emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]
          Length = 410

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = -3

Query: 409 MAHLCCSIEMEPRTLNEGQLNHAREAAVDIIQKMNSVESSNAFIEGLKPVVPIEEMEQI- 233
           MA +CCSIEMEPRTLNEGQL+HAREAAVDI+QKM   E+SN F +G++ VV ++EMEQ+ 
Sbjct: 1   MAKVCCSIEMEPRTLNEGQLHHAREAAVDIVQKMEPKEASNVFADGMRQVVTVKEMEQME 60

Query: 232 -VERRHQIQKLTVDCKETIVPAV 167
            +  + Q++KL  +C ET  PA+
Sbjct: 61  QMAEKEQLEKL-AECNET-APAI 81


>ref|XP_002299733.1| predicted protein [Populus trichocarpa] gi|222846991|gb|EEE84538.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/119 (43%), Positives = 66/119 (55%), Gaps = 17/119 (14%)
 Frame = -3

Query: 382 MEPRTLNEGQLNHAR-----------------EAAVDIIQKMNSVESSNAFIEGLKPVVP 254
           MEPRTL EGQL+HAR                 E A D+ QKM   E+S+ FI GL+PVV 
Sbjct: 1   MEPRTLREGQLSHARVSKAFDLLQALNVSFFQEVAADVAQKMEPEEASDVFINGLRPVVS 60

Query: 253 IEEMEQIVERRHQIQKLTVDCKETIVPAVDPFYDCACITPSVVDSPDLAPIREPLSAPF 77
           I+EM QI     +     V+CKE     +D    C+CI P  ++SPD   ++EPLSAPF
Sbjct: 61  IKEMSQIEGNGDRHDHKVVECKEKTAEIIDRPCQCSCI-PKDIESPDQLNLKEPLSAPF 118


>ref|XP_002515984.1| conserved hypothetical protein [Ricinus communis]
           gi|223544889|gb|EEF46404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
 Frame = -3

Query: 388 IEMEPRTLNEGQLNHAREAAVDIIQKMNSVESSNAFIEGLKPVVPIEEMEQIVERRHQ-- 215
           I  +PRTL +GQL HARE A D++QKM + E+   FI+GL+P    ++M+QI E +HQ  
Sbjct: 43  ITSKPRTLKQGQLIHAREIAADVVQKMKAEEAYTVFIKGLRPE---KQMDQIEENKHQED 99

Query: 214 -IQKLTVDCKETIVPAVDPFYDCACITPSVVDSPDLAPIREPLSAPF 77
             Q+    C +      +    C+ IT S ++SPD   I+EPLSAPF
Sbjct: 100 HHQEPVDYCHKDKGEDFESPCQCSVIT-SNIESPDQINIKEPLSAPF 145


>ref|XP_003627001.1| hypothetical protein MTR_8g013930 [Medicago truncatula]
           gi|355521023|gb|AET01477.1| hypothetical protein
           MTR_8g013930 [Medicago truncatula]
          Length = 108

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/111 (38%), Positives = 62/111 (55%)
 Frame = -3

Query: 409 MAHLCCSIEMEPRTLNEGQLNHAREAAVDIIQKMNSVESSNAFIEGLKPVVPIEEMEQIV 230
           MA+  C IE+EPRTLNE QL  ARE A ++++     E+S  F+EG+  V PI+E   + 
Sbjct: 1   MANTSCPIELEPRTLNEVQLTEARELAAEVVEMFEPSEASALFVEGI--VHPIKEETHMD 58

Query: 229 ERRHQIQKLTVDCKETIVPAVDPFYDCACITPSVVDSPDLAPIREPLSAPF 77
           E   Q++KL    K+T     +    C C + S      +  ++EPLSAPF
Sbjct: 59  ENEKQVEKLIDFTKKTETIPYEEVCQCQC-SCSAESQAYIVDVKEPLSAPF 108


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