BLASTX nr result

ID: Coptis23_contig00003123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003123
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001764363.1| predicted protein [Physcomitrella patens sub...   142   3e-32
ref|XP_001782988.1| predicted protein [Physcomitrella patens sub...   142   3e-32
gb|ABK24279.1| unknown [Picea sitchensis] gi|116792745|gb|ABK264...   142   3e-32
ref|XP_001776144.1| predicted protein [Physcomitrella patens sub...   141   6e-32
ref|XP_001761013.1| predicted protein [Physcomitrella patens sub...   139   2e-31

>ref|XP_001764363.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162684515|gb|EDQ70917.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 258

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -2

Query: 219 ADQSLKGYQAASNTASTDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 40
           ADQSLK YQAASNTA+TDL+PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA
Sbjct: 148 ADQSLKAYQAASNTATTDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 207

Query: 39  ELDTLSEESYKDS 1
           ELDTLSEESYKDS
Sbjct: 208 ELDTLSEESYKDS 220


>ref|XP_001782988.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162665505|gb|EDQ52187.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 258

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -2

Query: 219 ADQSLKGYQAASNTASTDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 40
           ADQSLK YQAASNTA+TDL+PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA
Sbjct: 148 ADQSLKAYQAASNTATTDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 207

Query: 39  ELDTLSEESYKDS 1
           ELDTLSEESYKDS
Sbjct: 208 ELDTLSEESYKDS 220


>gb|ABK24279.1| unknown [Picea sitchensis] gi|116792745|gb|ABK26478.1| unknown
           [Picea sitchensis]
          Length = 258

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -2

Query: 219 ADQSLKGYQAASNTASTDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 40
           ADQSLK YQAASNTA+TDL+PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA
Sbjct: 147 ADQSLKAYQAASNTATTDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 206

Query: 39  ELDTLSEESYKDS 1
           ELDTLSEESYKDS
Sbjct: 207 ELDTLSEESYKDS 219


>ref|XP_001776144.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672519|gb|EDQ59055.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 258

 Score =  141 bits (355), Expect = 6e-32
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = -2

Query: 219 ADQSLKGYQAASNTASTDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 40
           ADQSLK YQAASNTA TDL+PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA
Sbjct: 148 ADQSLKAYQAASNTAVTDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 207

Query: 39  ELDTLSEESYKDS 1
           ELDTLSEESYKDS
Sbjct: 208 ELDTLSEESYKDS 220


>ref|XP_001761013.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687699|gb|EDQ74080.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 246

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = -2

Query: 219 ADQSLKGYQAASNTASTDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 40
           ADQSLK YQAAS+TA TDL+PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA
Sbjct: 148 ADQSLKAYQAASSTAVTDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIA 207

Query: 39  ELDTLSEESYKDS 1
           ELDTLSEESYKDS
Sbjct: 208 ELDTLSEESYKDS 220


Top