BLASTX nr result

ID: Coptis23_contig00003120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003120
         (1195 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus co...   299   1e-78
ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis v...   299   1e-78
emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]   297   3e-78
ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 ...   296   5e-78
ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis v...   296   5e-78

>ref|XP_002517541.1| Gibberellin 20 oxidase, putative [Ricinus communis]
           gi|223543173|gb|EEF44705.1| Gibberellin 20 oxidase,
           putative [Ricinus communis]
          Length = 314

 Score =  299 bits (765), Expect = 1e-78
 Identities = 157/316 (49%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
 Frame = +1

Query: 1   MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGGTQ--LHPEMLG 174
           MGS +  K+PAI F  ++L+PGT  W  V+ ++R ALE YGCFEA F      L   + G
Sbjct: 1   MGSETPLKLPAIDFSTENLKPGTVEWELVKTQVRNALEEYGCFEAFFSRVHNDLKKGVFG 60

Query: 175 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 354
            +E+LF LP +TK K      F GY G Y   PL ES+  +D   +E+++SFT ++WP+G
Sbjct: 61  AIEELFELPLQTKLKNVSRKPFHGYVGQYPQAPLYESMGIEDPDTVEKVESFTSVLWPQG 120

Query: 355 NSNFCDILCSYVRQVSELELMVKRMIFESFGLEREFNATEKSTSYHLRFMRYMAPKTNEP 534
           N  F   + S+  QVS+L+ +V+RMI ES GLE+  +    ST Y LR M+Y  P+T+E 
Sbjct: 121 NLTFSKTVQSFSEQVSKLDKVVRRMIVESLGLEKYMDEHMNSTDYLLRVMKYKGPETSEA 180

Query: 535 NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 714
            LG+  HTD + +TIL QNQV GLEV+TK GEWI+VK +P S+VVMIGD+ +AW+N RLH
Sbjct: 181 KLGLHPHTDKNIVTILFQNQVDGLEVKTKNGEWITVKLSPDSFVVMIGDSLLAWANGRLH 240

Query: 715 NAIHRVMVRGDAIRHSMGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIAGEA 888
           +  HRVM+ G+  R+S GL S  K   I + PEELVDEEHPLLFKPF+H+ +  F   EA
Sbjct: 241 SPYHRVMMTGNEARYSCGLFSIPKAGYIVKAPEELVDEEHPLLFKPFDHVEFLGFYYTEA 300

Query: 889 RKGLKHASAMKAYCGV 936
             G +  SA+KAYCGV
Sbjct: 301 --GQRAQSALKAYCGV 314


>ref|XP_002284968.1| PREDICTED: gibberellin 20 oxidase 3 [Vitis vinifera]
           gi|297743335|emb|CBI36202.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  299 bits (765), Expect = 1e-78
 Identities = 152/316 (48%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
 Frame = +1

Query: 1   MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGGT--QLHPEMLG 174
           MGS +  K+P I F   +L+PGT  W  V+ ++++ALE YGCFEA F      L   + G
Sbjct: 1   MGSETPLKLPVIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFG 60

Query: 175 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 354
            LE+LF LP +TK + +    + GY G Y  +PL ES+  DD  V E+ + FT L+WPEG
Sbjct: 61  ALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEG 120

Query: 355 NSNFCDILCSYVRQVSELELMVKRMIFESFGLEREFNATEKSTSYHLRFMRYMAPKTNEP 534
           N NFC  + S+  Q+SEL+  ++RM+ ES G+E+  +    ST+Y LR M+Y  P+T E 
Sbjct: 121 NPNFCKTIQSFSEQLSELDHTIRRMVLESLGMEKYLDEHMDSTNYLLRVMKYKGPQTTET 180

Query: 535 NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 714
            LG++ HTD + +TIL QNQV GL VQTK G+WI++K +P S+++MIGD+ +AW+N RLH
Sbjct: 181 KLGLNAHTDKNIVTILYQNQVDGLGVQTKDGQWINIKCSPDSFIIMIGDSFLAWTNGRLH 240

Query: 715 NAIHRVMVRGDAIRHSMGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIAGEA 888
           +  HRVM+ G+  R+S GL S  K   + + PEELVDEEHPLLFKPF+HL + QF   EA
Sbjct: 241 SPYHRVMMTGNESRYSTGLFSIPKAGYVIKAPEELVDEEHPLLFKPFDHLEFLQFYYTEA 300

Query: 889 RKGLKHASAMKAYCGV 936
             G +  SA+K YCGV
Sbjct: 301 --GQRAESALKTYCGV 314


>emb|CAN80138.1| hypothetical protein VITISV_028512 [Vitis vinifera]
          Length = 314

 Score =  297 bits (761), Expect = 3e-78
 Identities = 152/316 (48%), Positives = 208/316 (65%), Gaps = 4/316 (1%)
 Frame = +1

Query: 1   MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGGT--QLHPEMLG 174
           MGS +  K+P I F   +L+PGT  W  V+ ++++ALE YGCFEA F      L   + G
Sbjct: 1   MGSETPLKLPXIDFSDPELKPGTLQWNLVKAQVQKALEEYGCFEAFFNKVPLDLRKAIFG 60

Query: 175 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 354
            LE+LF LP +TK + +    + GY G Y  +PL ES+  DD  V E+ + FT L+WPEG
Sbjct: 61  ALEELFDLPLQTKLRNSSKKPYHGYVGQYPTVPLYESMGIDDALVQEKAEHFTKLLWPEG 120

Query: 355 NSNFCDILCSYVRQVSELELMVKRMIFESFGLEREFNATEKSTSYHLRFMRYMAPKTNEP 534
           N NFC  + S+  Q+SEL+  ++RM+ ES G+E+  +    ST+Y LR M+Y  P+T E 
Sbjct: 121 NPNFCKTIQSFSEQLSELDHTIRRMVLESLGMEKYLDEHMDSTNYLLRVMKYKGPQTTET 180

Query: 535 NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 714
            LG++ HTD + +TIL QNQV GL VQTK G WI++K +P S+++MIGD+ +AW+N RLH
Sbjct: 181 KLGLNAHTDKNIVTILYQNQVDGLGVQTKDGXWINIKCSPDSFIIMIGDSFLAWTNGRLH 240

Query: 715 NAIHRVMVRGDAIRHSMGLLSYAKG--ITQTPEELVDEEHPLLFKPFNHLGYHQFIAGEA 888
           +  HRVM+ G+  R+S GL S  K   + + PEELVDEEHPLLFKPF+HL + QF   EA
Sbjct: 241 SPYHRVMMTGNESRYSTGLFSIPKAGYVIKAPEELVDEEHPLLFKPFDHLEFLQFYYTEA 300

Query: 889 RKGLKHASAMKAYCGV 936
             G +  SA+K YCGV
Sbjct: 301 --GQRAESALKTYCGV 314


>ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera]
           gi|297743341|emb|CBI36208.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  296 bits (759), Expect = 5e-78
 Identities = 147/314 (46%), Positives = 212/314 (67%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1   MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFGG--TQLHPEMLG 174
           MGS SS KIP + F +++L PG+ SW +   ++  ALE +GCF A +    ++L  ++  
Sbjct: 1   MGSHSSAKIPVVDFSKENLNPGSSSWSATCKDVLLALEEFGCFIAVYDKVPSELQNKLFS 60

Query: 175 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 354
            LE+LF LP+ETK +   N  + GY G +S +PL ESI  D+   +E +QSF +LMWP G
Sbjct: 61  ALEELFNLPTETKMQNAHNKPYHGYVGQHSRLPLHESIGIDNATTLEGMQSFANLMWPAG 120

Query: 355 NSNFCDILCSYVRQVSELELMVKRMIFESFGLEREFNATEKSTSYHLRFMRYMAPKTNEP 534
           N +FC+I   + +   EL+ +V +MIFES+G+ + +++  +  SY LR +++ APK  EP
Sbjct: 121 NDHFCEITREFSKIALELDHLVTKMIFESYGVGKYYDSHLEPMSYLLRVLKHKAPKVKEP 180

Query: 535 NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 714
           NLG   HTD SF+T+L QNQV GLEV+TK GEWIS++ +PSS+ V+ GDA +AWSN RLH
Sbjct: 181 NLGFARHTDKSFITVLYQNQVKGLEVETKDGEWISLELSPSSFAVIAGDALVAWSNGRLH 240

Query: 715 NAIHRVMVRGDAIRHSMGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIAGEARK 894
           +  H+VM+ G+  R+S+GL  ++ G+ Q PEEL D+EHPL FK FNHLG  +F   E  +
Sbjct: 241 SPYHKVMMSGNEERYSLGLFQFSSGMIQIPEELGDDEHPLQFKSFNHLGLLRFFHTE--E 298

Query: 895 GLKHASAMKAYCGV 936
           G K  S +K+YCG+
Sbjct: 299 GQKSKSLIKSYCGI 312


>ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera]
           gi|297743336|emb|CBI36203.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  296 bits (759), Expect = 5e-78
 Identities = 149/314 (47%), Positives = 210/314 (66%), Gaps = 2/314 (0%)
 Frame = +1

Query: 1   MGSISSDKIPAIVFYRKDLRPGTPSWCSVRDEIRQALELYGCFEAAFG--GTQLHPEMLG 174
           MGS  + ++P + F    L+PGT SW     ++  ALE YGCF A +    ++L      
Sbjct: 1   MGS-EAPRLPVLNFSTGTLKPGTRSWLLACKDVLHALEEYGCFVAVYDKVSSELDNTTFC 59

Query: 175 ELEKLFGLPSETKNKYTLNDVFEGYNGSYSNMPLLESISFDDVPVIERLQSFTDLMWPEG 354
           +LE+LF LP+ETK K T +  + GY G +  +PL ES+  +D   ++ ++SFT++MWP G
Sbjct: 60  QLEELFDLPTETKVKNTSDKPYFGYIGQHPLIPLHESMGIEDATTLKGVESFTNIMWPAG 119

Query: 355 NSNFCDILCSYVRQVSELELMVKRMIFESFGLEREFNATEKSTSYHLRFMRYMAPKTNEP 534
           N +FC+ + SY + VSELE MVK+M+FES+  E+ +++  +ST+Y LR ++Y  P+ NE 
Sbjct: 120 NDHFCETVLSYSKLVSELEQMVKKMVFESYDAEKYYDSHIQSTTYLLRLIKYRGPQKNET 179

Query: 535 NLGIDTHTDASFLTILNQNQVHGLEVQTKKGEWISVKPAPSSYVVMIGDACMAWSNCRLH 714
            +G   HTD SF+T+L+QN+V GLE++TK GEWIS KP+PSSYVVM GDA +AWSN R+H
Sbjct: 180 CIGTSCHTDKSFITVLHQNEVCGLEIRTKDGEWISFKPSPSSYVVMAGDALLAWSNGRIH 239

Query: 715 NAIHRVMVRGDAIRHSMGLLSYAKGITQTPEELVDEEHPLLFKPFNHLGYHQFIAGEARK 894
           +  HRV++ G+  R+S+GL +Y +GI + PEEL DEEHPL FKPFNH G   F      K
Sbjct: 240 SPEHRVIMNGNKARYSIGLFAYHRGIIEIPEELADEEHPLQFKPFNHYGLLHFYF--TNK 297

Query: 895 GLKHASAMKAYCGV 936
             +  S  KAYCGV
Sbjct: 298 AGQAESTAKAYCGV 311


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