BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003108
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...    83   3e-14
emb|CBI17841.3| unnamed protein product [Vitis vinifera]               83   3e-14
ref|XP_003541521.1| PREDICTED: replication factor A protein 2-li...    80   2e-13
ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subu...    80   2e-13
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]      78   7e-13

>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +1

Query: 19  SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSN 195
           SQFDGNAAFSGGGFMPSQ+ Q+ +PG+ S ++NRD+Q LLPLTVKQI +A   +D+KSN
Sbjct: 5   SQFDGNAAFSGGGFMPSQATQAAEPGF-SPARNRDTQALLPLTVKQISEAFLSSDDKSN 62


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/59 (67%), Positives = 50/59 (84%)
 Frame = +1

Query: 19  SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSN 195
           SQFDGNAAFSGGGFMPSQ+ Q+ +PG+ S ++NRD+Q LLPLTVKQI +A   +D+KSN
Sbjct: 5   SQFDGNAAFSGGGFMPSQATQAAEPGF-SPARNRDTQALLPLTVKQISEAFLSSDDKSN 62


>ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 277

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = +1

Query: 19  SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSNI 198
           SQFDGNAAFSGGGFMPSQ+ Q  D  +   SKNRD+Q LLPLTVKQI DAS  +D+K N+
Sbjct: 6   SQFDGNAAFSGGGFMPSQTTQGPDSSF-VPSKNRDAQSLLPLTVKQIYDASQSSDDKINL 64


>ref|XP_004146319.1| PREDICTED: replication protein A 32 kDa subunit B-like [Cucumis
           sativus] gi|449500253|ref|XP_004161048.1| PREDICTED:
           replication protein A 32 kDa subunit B-like [Cucumis
           sativus]
          Length = 277

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/59 (69%), Positives = 47/59 (79%)
 Frame = +1

Query: 19  SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSN 195
           SQFDGNAAFSGGGFMPSQ+ Q+ D  + S +KNRD Q LLPLTVKQI DA   +D+KSN
Sbjct: 4   SQFDGNAAFSGGGFMPSQTTQAPDHSF-SPAKNRDVQALLPLTVKQINDAFLSSDDKSN 61


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/59 (62%), Positives = 46/59 (77%)
 Frame = +1

Query: 19  SQFDGNAAFSGGGFMPSQSLQSTDPGYSSSSKNRDSQVLLPLTVKQIKDASNPNDEKSN 195
           +QFDGNAAFSGGGFMPSQ+ Q+      S +KNRDSQ L+PLTVKQI +A   +D+K+N
Sbjct: 25  NQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDKTN 83