BLASTX nr result
ID: Coptis23_contig00003107
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003107
(2413 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30150.3| unnamed protein product [Vitis vinifera] 525 e-146
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 499 e-138
ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2... 486 e-135
ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|2... 475 e-131
ref|XP_002519475.1| protein binding protein, putative [Ricinus c... 453 e-124
>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 525 bits (1351), Expect = e-146
Identities = 271/542 (50%), Positives = 370/542 (68%), Gaps = 13/542 (2%)
Frame = +3
Query: 279 TTSSSSSLEKTIGSQS---SEVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSCIDKWI 449
++SSS+ E GS ++D CC ICM++W+S G+HQVCCLPCGH+YG SCI KW
Sbjct: 83 SSSSSNGGETQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWF 142
Query: 450 RQCDKKSAAKCPQCSKKCGVKDIIKLYVSQIAVVDGEEQKKVLSLQAENEFLKMKIA--A 623
+QC + S+ KCPQC +KC ++++ LY S++ VD + +KK+ SL+A+ L+ K A
Sbjct: 143 QQCGR-SSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADWC 201
Query: 624 LHEKICQDEE-------EKMCEAASLLENVTSGEMRLGTSEIFTCVGDPQRQRLSGHTLG 782
+ E E +++ E + LE ++S G+ + GH
Sbjct: 202 MKESDWHKREADLHLQVQQLIERTTYLERLSSEMHGRGSGLVAA----------RGHNFA 251
Query: 783 SSYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPY 962
++G +GS+C F L+ EL ++GA+ DIDAS +IL++AR L G GG HVLTK+SL+ P+
Sbjct: 252 ENFGRRGSSC-NFVLQKELQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMSLISPH 310
Query: 963 DSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGSAWSCS 1142
+ E+I LP TK VKDL VSP +LAL ASLGKKLSVLSMESNN+++TYDLP +AWSCS
Sbjct: 311 EIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTYDLPTAAWSCS 370
Query: 1143 WDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPQPVHTIHSILHKSPSPSDVRTL 1322
WDLNS HY+YAGLQNGML+VFDMR A P+ ++G P+HTI S+LH S PS V TL
Sbjct: 371 WDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHNSTLPSGVSTL 430
Query: 1323 LTASAIGPCVWNTGAAGERPFLIPELENQGVCISVACCPSSDDIVASFRP-VQTSNDIIS 1499
L+AS++G C WN G + ERPFL+PE +N GVCIS+A CPSSD+IV++FRP V+ SN+I
Sbjct: 431 LSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIAV 490
Query: 1500 SQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSAVVNVENCNPL 1679
SQ LTPS V G+G+QGSHVL+KR+ GNCYQ + + ANVND+R +SA++++++ +PL
Sbjct: 491 SQYSLTPS--VMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPL 548
Query: 1680 FAYGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAK 1859
F GDE T L + ELPSL + Q LK +P+ DVK++ +L C+S+D LQ FSAK
Sbjct: 549 FVSGDEITHELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFSAK 608
Query: 1860 VS 1865
S
Sbjct: 609 FS 610
>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
Length = 567
Score = 499 bits (1284), Expect = e-138
Identities = 264/533 (49%), Positives = 352/533 (66%), Gaps = 4/533 (0%)
Frame = +3
Query: 279 TTSSSSSLEKTIGSQS---SEVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSCIDKWI 449
++SSS+ E GS ++D CC ICM++W+S G+HQVCCLPCGH+YG SCI KW
Sbjct: 83 SSSSSNGGETQEGSDGWVQDQIDGLCCPICMEAWTSGGEHQVCCLPCGHIYGISCIKKWF 142
Query: 450 RQCDKKSAAKCPQCSKKCGVKDIIKLYVSQIAVVDGEEQKKVLSLQAENEFLKMKIAALH 629
+QC + S+ KCPQC +KC ++++ LY S++ VD + +KK+ SL+A+ L+ K A
Sbjct: 143 QQCGR-SSGKCPQCKRKCTLRNVRTLYASRVVAVDEDLRKKIRSLEAKCASLEKKNADW- 200
Query: 630 EKICQDEEEKMCEAASLLENVTSGEMRLGTSEIFTCVGDPQRQRLSGHTLGSSYGAQGSN 809
C E + A L V Q+L
Sbjct: 201 ---CMKESDWHKREADLHLQV---------------------QQL--------------- 221
Query: 810 CCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPYDSENIQLPV 989
+E EL ++GA+ DIDAS +IL++AR L G GG HVLTK+SL+ P++ E+I LP
Sbjct: 222 -----IEKELQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMSLISPHEIEDILLPS 276
Query: 990 TTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGSAWSCSWDLNSPHYL 1169
TK VKDL VSP +LAL ASLGKKLSVLSMESNN+++TYDLP +AWSCSWDLNS HY+
Sbjct: 277 GTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTYDLPTAAWSCSWDLNSSHYM 336
Query: 1170 YAGLQNGMLLVFDMRHAANPLESLTGLKPQPVHTIHSILHKSPSPSDVRTLLTASAIGPC 1349
YAGLQNGML+VFDMR A P+ ++G P+HTI S+LH S PS V TLL+AS++G C
Sbjct: 337 YAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHNSTLPSGVSTLLSASSVGLC 396
Query: 1350 VWNTGAAGERPFLIPELENQGVCISVACCPSSDDIVASFRP-VQTSNDIISSQSPLTPSP 1526
WN G + ERPFL+PE +N GVCIS+A CPSSD+IV++FRP V+ SN+I SQ LTPS
Sbjct: 397 QWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIAVSQYSLTPS- 455
Query: 1527 TVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSAVVNVENCNPLFAYGDESTQ 1706
V G+G+QGSHVL+KR+ GNCYQ + + ANVND+R +SA++++++ +PLF GDE T
Sbjct: 456 -VMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITH 514
Query: 1707 GLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAKVS 1865
L + ELPSL + Q LK +P+ DVK++ +L C+S+D LQ FSAK S
Sbjct: 515 ELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFSAKFS 567
>ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1|
predicted protein [Populus trichocarpa]
Length = 681
Score = 486 bits (1252), Expect = e-135
Identities = 268/588 (45%), Positives = 381/588 (64%), Gaps = 24/588 (4%)
Frame = +3
Query: 174 TNSNATTTSPNRNDEQVELQHQTSFT-----VAGQDDVCITTSSSSSL-EKTIGSQ--SS 329
T + A + N +E+V+++ + + + D+C + E + SQ S
Sbjct: 108 TTAAAAAENLNFQEEEVDVEEERNKRRRVEKLGSGGDICYRNGGDDAGGESSQNSQWNRS 167
Query: 330 EVDTACCAICMDSWSSQGKHQVCCLPCGHVYGFSCIDKWIRQCDKKSAAKCPQCSKKCGV 509
E D C ICM++W+++G H +CCLPCGH++G SCI+KW+RQ + AKCPQC++K +
Sbjct: 168 EFDGLFCPICMEAWTNEGDHHICCLPCGHLFGLSCIEKWLRQ--RGRLAKCPQCNRKGTL 225
Query: 510 KDIIKLYVSQIAVVDGEEQKKVLSLQAENEFLKMKIAALHEK---ICQDEEE-KMCEAAS 677
+DI KL+V +IAVVD E QK++ FL+ K A+L +K +C+ E E K EAA
Sbjct: 226 RDIRKLFVPRIAVVDEESQKRI-------RFLEEKCASLVKKDVDLCKKESEWKRREAAL 278
Query: 678 LLE-----------NVTSGEMRLGTSEIFTCVGDPQRQRLSGHTLGSSYGAQGSNCCRFA 824
LE G+++ S + T Q G+++ S + QGS+ C F
Sbjct: 279 QLEVQKCKERTIYLEHLLGDLQSRPSGVATAYRGSQGHEF-GNSIYSDFNRQGSSSC-FM 336
Query: 825 LEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPYDSENIQLPVTTKNV 1004
L+ EL ++GA++ D+DAS +IL+L R +P MGG+HVLTK+SL+ P++SE+I LP TK +
Sbjct: 337 LQRELRVDGARLFDVDASGKILLLVRRVPMMGGSHVLTKMSLIPPHESEDIFLPPATKII 396
Query: 1005 KDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGSAWSCSWDLNSPHYLYAGLQ 1184
KDLH+SP LALFASLGKKLSVLSMESNN++++YDLP +AWSCSWDLN HY+YAGLQ
Sbjct: 397 KDLHISPTNGSLALFASLGKKLSVLSMESNNVILSYDLPAAAWSCSWDLNCSHYVYAGLQ 456
Query: 1185 NGMLLVFDMRHAANPLESLTGLKPQPVHTIHSILHKSPSPSDVRTLLTASAIGPCVWNTG 1364
NG LLVFDMR +P+ES G P+HT+ S+ H S PS V+T+++AS++G C WN G
Sbjct: 457 NGSLLVFDMRITGSPVESRLGHTTDPIHTVQSLQHISTLPSGVKTVVSASSVGMCQWNFG 516
Query: 1365 AAGERPFLIPELENQGVCISVACCPSSDDIVASFRP-VQTSNDIISSQSPLTPSPTVGGR 1541
ERPFLIPE NQGVC+S+A C SSDDIV S+RP V+ SN+++ SQ+ PS G+
Sbjct: 517 GEEERPFLIPETTNQGVCVSLAYCASSDDIVVSYRPRVEMSNEVV-SQTLFKPS-LATGQ 574
Query: 1542 GIQGSHVLIKRLVGNCYQNVACTSANVNDVRFLKSAVVNVENCNPLFAYGDESTQGLSVY 1721
G+ GSH+ +KR G+ Y+ + + V+ +R KS++++ +N PLFA GDE + GL +
Sbjct: 575 GVLGSHLHLKR-AGSNYEKLGIACSTVSGIRLPKSSIIDRQNQKPLFATGDEVSCGLILQ 633
Query: 1722 ELPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAKVS 1865
ELPS Q LK H + I DVK+ T G+LGC+S+D +Q+FS K+S
Sbjct: 634 ELPSFTATQRLKSHQHFIYDVKYTSTHSQGLLGCLSEDTVQLFSTKLS 681
>ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|222865435|gb|EEF02566.1|
predicted protein [Populus trichocarpa]
Length = 605
Score = 475 bits (1223), Expect = e-131
Identities = 258/556 (46%), Positives = 354/556 (63%), Gaps = 4/556 (0%)
Frame = +3
Query: 207 RNDEQVELQHQTSFTVAGQDDVCITTSSSSSLEKTIGSQSSEVDTACCAICMDSWSSQGK 386
R + ++ + F++ +++ T + E T+ + ++D CAICM+ W S+G
Sbjct: 77 RGSNERRIEERDGFSLTRKENEG-TVEEAKRREDTV--EEYDLDGLNCAICMEPWRSEGD 133
Query: 387 HQVCCLPCGHVYGFSCIDKWIRQCDKKSAAKCPQCSKKCGVKDIIKLYVSQIAVVDGEEQ 566
HQV CLPCGH+YGFSCI KW+++ KCPQC+ KC KDI KLY + + V+D Q
Sbjct: 134 HQVSCLPCGHLYGFSCISKWLQR--PVPTTKCPQCNAKCKFKDIRKLYTTPVVVIDEGLQ 191
Query: 567 KKVLSLQAENEFLKMKIAALHEKICQDEEEKMCEAASLLENVTSGEMRLGTSEIFTCVGD 746
KKV SL+ E LK E + EN + +M + F
Sbjct: 192 KKVESLEDEIGSLKT------------------EKPACTENTSFEQMGSKPHQFFNA--- 230
Query: 747 PQRQRLSGHTLGSSYGAQGSNC---CRFALEDELVLEGAKIMDIDASNQILILARCLPGM 917
+ G G S+G+ S C F L+ EL +EG ++ +D S Q LIL R + GM
Sbjct: 231 ---KEAQGAQSGCSFGSYSSKQLLHCNFKLQHELAIEGGRLFAMDFSYQNLILTRRIAGM 287
Query: 918 GGNHVLTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNN 1097
GG H+L KI+L+ P ++E+IQLP +TK VKD+ +SP G KL L ASLGKKLS+LSMESNN
Sbjct: 288 GGMHMLNKINLINPRENEDIQLPPSTKAVKDIQISPCG-KLTLLASLGKKLSILSMESNN 346
Query: 1098 IVVTYDLPGSAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPQPVHTIH 1277
IVVTY+L AWSCSWDLNSPHY+YAGLQNGMLLVFDMR NPL+S+ G P+HT+H
Sbjct: 347 IVVTYNLRVPAWSCSWDLNSPHYVYAGLQNGMLLVFDMRGTLNPLQSMVGPVLGPIHTMH 406
Query: 1278 SILHKSPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQGVCISVACCPSSDDIV 1457
+ S+ + LLTAS++GPCVWNT AG+RPFL+P ENQG+C S+A P SDDIV
Sbjct: 407 PLAQNPVLGSNSQKLLTASSLGPCVWNTD-AGKRPFLVPGFENQGICTSLAYGPLSDDIV 465
Query: 1458 ASFRP-VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVR 1634
AS+ P + SN ++SQ S G S +L+KR+ + Y+N+ TSA +++ +
Sbjct: 466 ASYHPKSKKSNATVNSQCIDPDSSPFPGSATLCSQLLVKRIADSHYRNLGSTSAYLSNGQ 525
Query: 1635 FLKSAVVNVENCNPLFAYGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAPTPGSGI 1814
++A++N++NC PLFAYGDE+T+GL + ELPS + QNLKPHH+PILDVK+A +GI
Sbjct: 526 MARTAIINMQNCFPLFAYGDEATRGLRLKELPSFNVTQNLKPHHHPILDVKYAHNQDTGI 585
Query: 1815 LGCISKDRLQVFSAKV 1862
LG +S+D+LQ+FSA++
Sbjct: 586 LGSVSEDKLQLFSAEL 601
>ref|XP_002519475.1| protein binding protein, putative [Ricinus communis]
gi|223541338|gb|EEF42889.1| protein binding protein,
putative [Ricinus communis]
Length = 606
Score = 453 bits (1165), Expect = e-124
Identities = 245/563 (43%), Positives = 359/563 (63%), Gaps = 9/563 (1%)
Frame = +3
Query: 204 NRNDEQVELQHQTSFTVAGQDDVCITTSSSSSLEKTIGSQSSEVDTACCAICMDSWSSQG 383
+ DE+ E + V + D ++ ++ + + G+++ E++ C ICMD+W+S+G
Sbjct: 66 DEEDEEEEKERNKRRRVERERDNSYNSNGEAAGQSSQGNRN-EIEGLFCPICMDAWTSEG 124
Query: 384 KHQVCCLPCGHVYGFSCIDKWIRQCDKKSAAKCPQCSKKCGVKDIIKLYVSQIAVVDGEE 563
H +CCLPCGH++G SCI KW++Q +S AKCPQC++KC +KD+ KL+ ++AVVD E
Sbjct: 125 DHHICCLPCGHLFGLSCISKWLKQ--NRSKAKCPQCNRKCTLKDVRKLFAPRLAVVDEES 182
Query: 564 QKKVLSLQAENEFLKMKIAALH------EKICQDEEEKMCEAASLLENVTSGEMRLGTSE 725
QK L Q+ ++ + E Q + ++ + + LE++ G++ ++
Sbjct: 183 QKVFLFSQSSGFYMYFNWCKMESEWQKREADLQHKINQLTQRTNYLEHLL-GDVESRSTV 241
Query: 726 IFTCVGDPQRQRLSGHTLGSSYGAQGSNCCRFALEDELV--LEGAKIMDIDASNQILILA 899
+ T Q + G+ L F ED L+GA++ D+DA QIL+LA
Sbjct: 242 LVTGSRSYQEHFIPGNLL-------------FQAEDLFFNFLDGARLFDMDALGQILLLA 288
Query: 900 RCLPGMGGNHVLTKISLMYPYDSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVL 1079
R P +G +HVLTK++L+ P+++E+I LP K +KDLH+SP+ AL ASLGK LSVL
Sbjct: 289 RRFPKIG-SHVLTKMNLLPPHETEDILLPSNMKIIKDLHISPFNRSHALCASLGKNLSVL 347
Query: 1080 SMESNNIVVTYDLPGSAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPQ 1259
SMESN ++++ +LP AWSCSWDLNS HY+YAGLQNG LL FD+R +ES GL
Sbjct: 348 SMESNCVILSCNLPAPAWSCSWDLNSSHYIYAGLQNGSLLAFDIRQTGREVESRLGLTNN 407
Query: 1260 PVHTIHSILHKSPSPSDVRTLLTASAIGPCVWNTGAAGERPFLIPELENQGVCISVACCP 1439
P+HT+HS+ + S S R LL+AS++G C WN ERPFLIPE NQGVCISVA CP
Sbjct: 408 PIHTLHSL--QDNSSSGARRLLSASSVGICQWNFDNTEERPFLIPETANQGVCISVAYCP 465
Query: 1440 SSDDIVASFRP-VQTSNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSA 1616
S+DDIVA++RP V+ SN++ SQ PLTPSP + G+G+ GSH+ +KR + YQ + SA
Sbjct: 466 STDDIVATYRPRVEISNEMAVSQPPLTPSPVI-GQGVLGSHLHLKR-TDDKYQELGTASA 523
Query: 1617 NVNDVRFLKSAVVNVENCNPLFAYGDESTQGLSVYELPSLGILQNLKPHHNPILDVKFAP 1796
++++R KS +V++EN PLFA GDE++ GL + ELPS Q LK H + I DVK+
Sbjct: 524 TISNIRLPKSVIVDMENRKPLFAAGDEASCGLILQELPSFSYAQRLKSHKHLICDVKYKR 583
Query: 1797 TPGSGILGCISKDRLQVFSAKVS 1865
T G++GC+S+D LQ+FS+K++
Sbjct: 584 TLSLGLVGCLSEDTLQLFSSKLT 606