BLASTX nr result
ID: Coptis23_contig00003071
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003071
(1475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26110.3| unnamed protein product [Vitis vinifera] 216 9e-54
ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding prote... 216 9e-54
emb|CBI34243.3| unnamed protein product [Vitis vinifera] 199 2e-48
ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding prote... 194 4e-47
ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus c... 184 7e-44
>emb|CBI26110.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 216 bits (551), Expect = 9e-54
Identities = 159/440 (36%), Positives = 211/440 (47%), Gaps = 10/440 (2%)
Frame = +3
Query: 6 CTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQV 185
CTV+IA+ SFTGEP WS LK L P LE DE EQV
Sbjct: 121 CTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRLSQASSSTSSAP-LESGGNDELEQV 179
Query: 186 VVARALAKLCPPDMKKSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPYLHCT 365
VAR LA L PP+ KS ++ + Q S P RD+ P + + LY + W H
Sbjct: 180 TVARYLASLQPPEANKSAQRDGL--LGQGSTPCRRDLMPNDNAISLYSMHCRDWS--HSA 235
Query: 366 PEMTM-YQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQKP 539
P + + +Q W E+ SQQQN ++ LP A + P PQ+ P + SIFQPDHG + R+Q+P
Sbjct: 236 PLIQLAHQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEP 295
Query: 540 --ISGGIPMAAPGPSHLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHK 713
+S GI GP FSN +MP+ V + S VTIQEI EE+PK E +WL D NS C K
Sbjct: 296 APLSPGI-----GPFLYFSNGSMPVPVSNLSQVTIQEI-EEKPKVEQEWLNVDANSGCWK 349
Query: 714 VEVQSNSSVLPQFEVQNLSASNKSSPEPL---LQNEPHEDQKSGKLNIGHSKLEGTQSEL 884
+ SN S L E+ S S EP+ LQ + E+ +G ++++
Sbjct: 350 INFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRLA--- 406
Query: 885 SKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSRPSSLGVAKYCSQSS 1064
W S DT RS A + ++L + D +S + + ++ +
Sbjct: 407 --WTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRP 462
Query: 1065 NAAPMXXXXXXXXXXXXXXXXXLNPWVPASATFRTAAPACSARPRL---MKIGATPSHHF 1235
+AAP+ + +V A R AAP S RP L G P F
Sbjct: 463 SAAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRF 522
Query: 1236 MAPAVQIRSVVPVCSAPPAK 1295
MAPAV IRSVVPVCSAPPAK
Sbjct: 523 MAPAVNIRSVVPVCSAPPAK 542
>ref|XP_002276654.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
vinifera]
Length = 563
Score = 216 bits (551), Expect = 9e-54
Identities = 159/440 (36%), Positives = 211/440 (47%), Gaps = 10/440 (2%)
Frame = +3
Query: 6 CTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQV 185
CTV+IA+ SFTGEP WS LK L P LE DE EQV
Sbjct: 121 CTVDIAKMSFTGEPAKTKKQAQKNAAMAAWSALKRLSQASSSTSSAP-LESGGNDELEQV 179
Query: 186 VVARALAKLCPPDMKKSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPYLHCT 365
VAR LA L PP+ KS ++ + Q S P RD+ P + + LY + W H
Sbjct: 180 TVARYLASLQPPEANKSAQRDGL--LGQGSTPCRRDLMPNDNAISLYSMHCRDWS--HSA 235
Query: 366 PEMTM-YQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQKP 539
P + + +Q W E+ SQQQN ++ LP A + P PQ+ P + SIFQPDHG + R+Q+P
Sbjct: 236 PLIQLAHQSWPKERASQQQNHLLALPSAPTTLPRPQMSPIIRSIFQPDHGPCFLPREQEP 295
Query: 540 --ISGGIPMAAPGPSHLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNCHK 713
+S GI GP FSN +MP+ V + S VTIQEI EE+PK E +WL D NS C K
Sbjct: 296 APLSPGI-----GPFLYFSNGSMPVPVSNLSQVTIQEI-EEKPKVEQEWLNVDANSGCWK 349
Query: 714 VEVQSNSSVLPQFEVQNLSASNKSSPEPL---LQNEPHEDQKSGKLNIGHSKLEGTQSEL 884
+ SN S L E+ S S EP+ LQ + E+ +G ++++
Sbjct: 350 INFPSNLSGLSLVEIPKCPISPNSHSEPIQEALQGKEEENSAGNSAQLGTNQIQRLA--- 406
Query: 885 SKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSRPSSLGVAKYCSQSS 1064
W S DT RS A + ++L + D +S + + ++ +
Sbjct: 407 --WTSPRFADT--RSSAGASDEANLWLQNQQFLDYLQSNIRSQNAPMATYPGSSRVYTRP 462
Query: 1065 NAAPMXXXXXXXXXXXXXXXXXLNPWVPASATFRTAAPACSARPRL---MKIGATPSHHF 1235
+AAP+ + +V A R AAP S RP L G P F
Sbjct: 463 SAAPVTIRSSDASSIRKPRPMSSSLFVSAPPPTRYAAPTWSTRPTLEGAKYTGVRPCSRF 522
Query: 1236 MAPAVQIRSVVPVCSAPPAK 1295
MAPAV IRSVVPVCSAPPAK
Sbjct: 523 MAPAVNIRSVVPVCSAPPAK 542
>emb|CBI34243.3| unnamed protein product [Vitis vinifera]
Length = 551
Score = 199 bits (505), Expect = 2e-48
Identities = 167/452 (36%), Positives = 211/452 (46%), Gaps = 10/452 (2%)
Frame = +3
Query: 6 CTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQV 185
CTVEIA SFTGE WS L++L Q P +E E +EQEQV
Sbjct: 121 CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALRKLS--QRGSPSSPSVESECNEEQEQV 178
Query: 186 VVARALAKLCPPDMKKSTIQNDRHSVRQRSAPVHRD---MKPARSGMHLYPVPYPSWPYL 356
++AR LA L P K + QNDR +QRS + RD P M PS+
Sbjct: 179 IIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSF--- 233
Query: 357 HCTPEMTMYQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQ 533
PEM MYQ+WQ EQ++Q QNR++ LPV +P P P PF+ S+F+PDH Y Q
Sbjct: 234 --FPEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQ 291
Query: 534 KPISGG--IPMAAPGPSHLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNC 707
+PI+ G +AA G S SN +P +R RS VTIQEI E + + S
Sbjct: 292 QPITMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEE----------KTEERSEF 341
Query: 708 HKVEVQSNSSVLPQFEVQNLSASNKSSPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSELS 887
EV SV P N A N+ EP+ ++ ++ G +LE Q
Sbjct: 342 SPSEV----SVSPALGDNNTEAINQ---EPIQEDNKQNTEELGGKIATSVQLERNQPGQF 394
Query: 888 KWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSK-LPQHPSRPSSLGVAKYCSQSS 1064
W T+ RS + G E L GFDSS+S P HP SS ++ S+
Sbjct: 395 GW-------TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPPGLSSYRSSR--PPST 445
Query: 1065 NAAPMXXXXXXXXXXXXXXXXXLNPWVPASATFRTAAPACSARPR--LMKIGATPSHHFM 1238
AAP+ L +PA RT P S RPR M G P M
Sbjct: 446 VAAPVMTRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPP-RAM 504
Query: 1239 APAVQIRSVVPVCSAPPA-KLPESSQKVLHSI 1331
APAVQIR+VVPVCSAPPA K+P S K + SI
Sbjct: 505 APAVQIRTVVPVCSAPPARKIPRPSSKEMTSI 536
>ref|XP_002271134.2| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 532
Score = 194 bits (494), Expect = 4e-47
Identities = 166/449 (36%), Positives = 208/449 (46%), Gaps = 10/449 (2%)
Frame = +3
Query: 6 CTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKELPHLQXXXXXLPKLEVERKDEQEQV 185
CTVEIA SFTGE WS L+ KLE E +EQEQV
Sbjct: 121 CTVEIAGMSFTGEAAKTKKQAQKNAAMTAWSALR-------------KLESECNEEQEQV 167
Query: 186 VVARALAKLCPPDMKKSTIQNDRHSVRQRSAPVHRD---MKPARSGMHLYPVPYPSWPYL 356
++AR LA L P K + QNDR +QRS + RD P M PS+
Sbjct: 168 IIARVLASLRPS--KSNNKQNDRQHGQQRSGSICRDSTPQTPISCSMQYQSTVDPSF--- 222
Query: 357 HCTPEMTMYQLWQPEQVSQQQNRIITLPVAQSP-PVPQILPFVHSIFQPDHGQYIIARDQ 533
PEM MYQ+WQ EQ++Q QNR++ LPV +P P P PF+ S+F+PDH Y Q
Sbjct: 223 --FPEMAMYQMWQQEQLAQLQNRLLALPVPLAPQPSPHFFPFMQSMFRPDHCLYFPTEVQ 280
Query: 534 KPISGG--IPMAAPGPSHLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSNC 707
+PI+ G +AA G S SN +P +R RS VTIQEI E + + S
Sbjct: 281 QPITMGPRFSIAASGSSFYLSNHLVPEPMRGRSMVTIQEIEE----------KTEERSEF 330
Query: 708 HKVEVQSNSSVLPQFEVQNLSASNKSSPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSELS 887
EV SV P N A N+ EP+ ++ ++ G +LE Q
Sbjct: 331 SPSEV----SVSPALGDNNTEAINQ---EPIQEDNKQNTEELGGKIATSVQLERNQPGQF 383
Query: 888 KWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSK-LPQHPSRPSSLGVAKYCSQSS 1064
W T+ RS + G E L GFDSS+S P HP SS ++ S+
Sbjct: 384 GW-------TSRRSVDSRLGPIEFQLQRPHGFDSSQSNPRPYHPPGLSSYRSSR--PPST 434
Query: 1065 NAAPMXXXXXXXXXXXXXXXXXLNPWVPASATFRTAAPACSARPR--LMKIGATPSHHFM 1238
AAP+ L +PA RT P S RPR M G P M
Sbjct: 435 VAAPVMTRTGDPVSSVGLRPQNLANQMPAPPRMRTGIPPYSFRPRPERMDFGRGPP-RAM 493
Query: 1239 APAVQIRSVVPVCSAPPA-KLPESSQKVL 1322
APAVQIR+VVPVCSAPPA K+P SSQ+ L
Sbjct: 494 APAVQIRTVVPVCSAPPARKIPSSSQEGL 522
>ref|XP_002512276.1| hypothetical protein RCOM_1429110 [Ricinus communis]
gi|223548237|gb|EEF49728.1| hypothetical protein
RCOM_1429110 [Ricinus communis]
Length = 568
Score = 184 bits (466), Expect = 7e-44
Identities = 156/482 (32%), Positives = 229/482 (47%), Gaps = 18/482 (3%)
Frame = +3
Query: 6 CTVEIARWSFTGEPXXXXXXXXXXXXXXXWSTLKEL-PHLQXXXXXLPKLEVERK---DE 173
CTVE+A SFTGEP WS LK L H L VE + +E
Sbjct: 121 CTVELAGMSFTGEPARTKKQAQKNAAMAAWSALKRLVQHGSSSSSSLSSSLVENRKGSEE 180
Query: 174 QEQVVVARALAKLCPPDMKKSTIQNDRHSVRQRSAPVHRDMKPARSGMHLYPVPYPSWPY 353
QEQVV+AR LA + P ++K + QND + +R PV +D+ P LYP+ +W Y
Sbjct: 181 QEQVVIARFLASVQPSELKINK-QNDCQTGHERFIPVCKDLTPPTPS--LYPMQSQNWAY 237
Query: 354 LHCTPEMTMYQLWQPEQVSQQQNRIITLPVAQS-PPVPQILPFVHSIFQPDHGQYIIARD 530
+PE+ +YQ+WQ EQ+ Q NR++TL V + PP P +LP++ S+ P+ + R
Sbjct: 238 PSFSPEIAIYQMWQQEQLLQLHNRLLTLQVPPAPPPAPPMLPYMQSVLPPNSHLFFPLRK 297
Query: 531 QK--PISGGIPMAAPGPSHLFSNCTMPIQVRSRSHVTIQEIHEERPKGEDDWLRGDTNSN 704
Q+ P+ I +A+ GP S+ VR +S VTIQEI+EE+P+ D
Sbjct: 298 QETVPVGPRITIASSGPLLCLSDNVDSDSVRGKSAVTIQEINEEKPEDLSDC-------- 349
Query: 705 CHKVEVQSNSSVLPQFEVQNLSASNKSSPEPLLQNEPHEDQKSGKLNIGHSKLEGTQSEL 884
S S + + NLSA + E H+D K+ N SK+E + L
Sbjct: 350 -------SPSIISDPPVLGNLSAEARF-------KESHDDDKN---NAVESKVENVR--L 390
Query: 885 SKWPSQSPMDTASRSEATSPGRTEIFLGSSGGFDSSRSKLPQHPSR-------PSSLGVA 1043
++ PS ++ R+ + + + + S G F S + P + P ++ +
Sbjct: 391 AENPSG---QSSHRNTDSGYSQVDFRVQSPGVFVSCHASSQFSPRQSSTSCRPPPTVMIR 447
Query: 1044 KYCSQSSNAAPMXXXXXXXXXXXXXXXXXLNPWVPASATFRTAAPACSARPRLMKIGATP 1223
+ AAP L +P RT AP+ SARP+ ++
Sbjct: 448 NVGPRPLPAAPPVRIRTMGPVSSVPRPHDLAAQIPGPPRMRTGAPSYSARPQPQRMDFVG 507
Query: 1224 SH-HFMAPAVQIRSVVPVCSAPP--AKLPESSQK-VLHSIAERTKEPKDVATANSELSNL 1391
H FMAPAV+IRSVVPVCSAPP K+P + Q+ L + + P+D++T SE S L
Sbjct: 508 VHPRFMAPAVRIRSVVPVCSAPPPARKMPTAGQEGALLNKQKNGSVPEDIST-TSEFSKL 566
Query: 1392 RI 1397
RI
Sbjct: 567 RI 568