BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003070
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteo...   483   e-134
ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycin...   481   e-133
ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subun...   481   e-133
ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteo...   479   e-133
ref|XP_002319519.1| predicted protein [Populus trichocarpa] gi|1...   466   e-129

>ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 3, chloroplastic-like [Glycine max]
          Length = 327

 Score =  483 bits (1244), Expect = e-134
 Identities = 235/291 (80%), Positives = 264/291 (90%), Gaps = 2/291 (0%)
 Frame = -2

Query: 1184 RSSIKCAAAKIPMPPLNPKDPFLSRLASVASSNPD--LKPSSNSDTPPYLDLFDSPQLMA 1011
            ++S      KIPMPPLNPKDPFLS+LASVA+S+P+  L    NSDT PYLD+FDSP+LMA
Sbjct: 35   KTSCSVNRPKIPMPPLNPKDPFLSKLASVAASSPETLLNTPKNSDTLPYLDIFDSPKLMA 94

Query: 1010 SPAQAERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPK 831
            +PAQ ERSVSYNEHRPR+PPPDLPSLLLHGRIVYIGMPLVPAVTELV+AEL+YLQYMDPK
Sbjct: 95   TPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQYMDPK 154

Query: 830  EPIYLYISSTGTTRDDGETVGMESEGFAIYDAMMQLKNDIQTVGVGAAVGQACLLLAAGK 651
            EPIY+YI+STGTTRDDGETVGME+EGFAIYDAMMQLKN+I TV VG+A+GQACLLL+AG 
Sbjct: 155  EPIYIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGSAIGQACLLLSAGS 214

Query: 650  KGRRFMMPHAKAMIQQPRLPSSGLMPASDVLIRAKEVVTNRDALVKLLARHTGNSFEKVA 471
             G+RFMMPHAKAMIQQPR+PSSGLMPASDVLIRAKEV+ NRD LVKLLA+HTGNS E VA
Sbjct: 215  PGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRDNLVKLLAKHTGNSEETVA 274

Query: 470  TVMKRPYYMDATQAKNFGVIDKILWRGQEKIMADAASPEEWDKKAGIKVAD 318
             VMKRPYYMDAT+AK FGVID+ILWRGQEK+MAD ASP++WDK AGIK+ D
Sbjct: 275  NVMKRPYYMDATRAKEFGVIDRILWRGQEKVMADVASPDDWDKGAGIKIVD 325


>ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
            gi|255635968|gb|ACU18330.1| unknown [Glycine max]
          Length = 324

 Score =  481 bits (1237), Expect = e-133
 Identities = 233/291 (80%), Positives = 265/291 (91%), Gaps = 2/291 (0%)
 Frame = -2

Query: 1184 RSSIKCAAAKIPMPPLNPKDPFLSRLASVASSNPD--LKPSSNSDTPPYLDLFDSPQLMA 1011
            ++S    AAKIPMPPLNPKDPFLS+LAS+A+S+PD  L    NSDTPP+LD+FDSP+LMA
Sbjct: 32   KTSCSVNAAKIPMPPLNPKDPFLSKLASIAASSPDTLLNTPKNSDTPPFLDIFDSPKLMA 91

Query: 1010 SPAQAERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPK 831
            +PAQ ERSVSYNEHRPR+PPPDLPSLLLHGRIVYIGMPLVPAVTELV+AEL+ LQYMDPK
Sbjct: 92   TPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMCLQYMDPK 151

Query: 830  EPIYLYISSTGTTRDDGETVGMESEGFAIYDAMMQLKNDIQTVGVGAAVGQACLLLAAGK 651
            E I++YI+STGTTRDDGETVGME+EGFAIYDAMMQLKN+I TV VG+A+GQACLLL+AG 
Sbjct: 152  ETIFIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNEIHTVAVGSAIGQACLLLSAGT 211

Query: 650  KGRRFMMPHAKAMIQQPRLPSSGLMPASDVLIRAKEVVTNRDALVKLLARHTGNSFEKVA 471
             G+RFMMPHAKAMIQQPR+PSSGLMPASDVLIRAKEV+ NRD LVKLLA+HTGNS E VA
Sbjct: 212  PGKRFMMPHAKAMIQQPRIPSSGLMPASDVLIRAKEVIINRDNLVKLLAKHTGNSEETVA 271

Query: 470  TVMKRPYYMDATQAKNFGVIDKILWRGQEKIMADAASPEEWDKKAGIKVAD 318
             VMKRPYYMDAT+AK FGVID+ILWRG+EK+MAD ASP++WDK AGIK+ D
Sbjct: 272  NVMKRPYYMDATRAKEFGVIDRILWRGREKVMADVASPDDWDKGAGIKIVD 322


>ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
            communis] gi|223548389|gb|EEF49880.1| ATP-dependent Clp
            protease proteolytic subunit, putative [Ricinus communis]
          Length = 325

 Score =  481 bits (1237), Expect = e-133
 Identities = 233/288 (80%), Positives = 263/288 (91%), Gaps = 2/288 (0%)
 Frame = -2

Query: 1175 IKCAAAKIPMPPLNPKDPFLSRLASVASSNPD--LKPSSNSDTPPYLDLFDSPQLMASPA 1002
            I C+++KIPMPP+NPKDPFLS+LAS+A+++PD  L     SDTPP+LDLFDSP+LMA+PA
Sbjct: 36   INCSSSKIPMPPINPKDPFLSKLASIAANSPDSLLDRPITSDTPPFLDLFDSPKLMATPA 95

Query: 1001 QAERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPI 822
            Q ERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELV+AEL+YLQ+MDPKEPI
Sbjct: 96   QVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKEPI 155

Query: 821  YLYISSTGTTRDDGETVGMESEGFAIYDAMMQLKNDIQTVGVGAAVGQACLLLAAGKKGR 642
            YLYI+STGTTRDDGETVGME+EGFAIYD+MMQLKN+I TV VGAA+GQACLLLAAG KG+
Sbjct: 156  YLYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGK 215

Query: 641  RFMMPHAKAMIQQPRLPSSGLMPASDVLIRAKEVVTNRDALVKLLARHTGNSFEKVATVM 462
            RFMMPHAKAMIQQP++PSSGLM ASDVLIRAKE VTNRD LV+LLA+HT NS E VA  M
Sbjct: 216  RFMMPHAKAMIQQPKVPSSGLMAASDVLIRAKEAVTNRDTLVELLAKHTENSVETVANAM 275

Query: 461  KRPYYMDATQAKNFGVIDKILWRGQEKIMADAASPEEWDKKAGIKVAD 318
            KRP+YMD+ +AK FGVIDKILWRGQEKIMAD  +PEEWDK AGIK+AD
Sbjct: 276  KRPFYMDSRRAKEFGVIDKILWRGQEKIMADVVTPEEWDKMAGIKIAD 323


>ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 3, chloroplastic [Vitis vinifera]
            gi|296089701|emb|CBI39520.3| unnamed protein product
            [Vitis vinifera]
          Length = 322

 Score =  479 bits (1232), Expect = e-133
 Identities = 234/286 (81%), Positives = 264/286 (92%), Gaps = 2/286 (0%)
 Frame = -2

Query: 1163 AAKIPMPPLNPKDPFLSRLASVASSNPD--LKPSSNSDTPPYLDLFDSPQLMASPAQAER 990
            +AKIPM P+NPKDPFLS+LASVA+++P+  L+  S SD+ P+LDLFDSP+LMA+PAQ ER
Sbjct: 37   SAKIPMSPINPKDPFLSKLASVAATSPERLLQRPSGSDSLPFLDLFDSPKLMATPAQVER 96

Query: 989  SVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYI 810
            SVSYNEHRPR+PPPDLPSLLLHGRIVYIGMPLVPAVTELVIAEL+YLQ+MDPKEP+Y+YI
Sbjct: 97   SVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYI 156

Query: 809  SSTGTTRDDGETVGMESEGFAIYDAMMQLKNDIQTVGVGAAVGQACLLLAAGKKGRRFMM 630
            + TGTTRDDGE VGME+EGFAIYDAMMQLKN+I TV VGAA+GQACLLLAAG KG+RFMM
Sbjct: 157  NCTGTTRDDGERVGMETEGFAIYDAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMM 216

Query: 629  PHAKAMIQQPRLPSSGLMPASDVLIRAKEVVTNRDALVKLLARHTGNSFEKVATVMKRPY 450
            PHAKAMIQQPR+PSSGLMPASDVLIRAKEV+TNRD LVKLLA+HTGNS E V+TVM+RPY
Sbjct: 217  PHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPY 276

Query: 449  YMDATQAKNFGVIDKILWRGQEKIMADAASPEEWDKKAGIKVADAI 312
            YMD+T+AK FGVIDKILWRGQEKIMAD  SPEEWDK AGI+V D I
Sbjct: 277  YMDSTKAKEFGVIDKILWRGQEKIMADVLSPEEWDKNAGIQVVDGI 322


>ref|XP_002319519.1| predicted protein [Populus trichocarpa] gi|118486796|gb|ABK95233.1|
            unknown [Populus trichocarpa] gi|222857895|gb|EEE95442.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  466 bits (1198), Expect = e-129
 Identities = 225/287 (78%), Positives = 257/287 (89%), Gaps = 4/287 (1%)
 Frame = -2

Query: 1166 AAAKIPMPPLNPKDPFLSRLASVASSNPDL----KPSSNSDTPPYLDLFDSPQLMASPAQ 999
            +++ IPMPP+NPKDPFLS+LAS+A+++PD      P S SDTPPYLD+F+SP+LMA+PAQ
Sbjct: 53   SSSNIPMPPINPKDPFLSKLASIAATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQ 112

Query: 998  AERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIY 819
             ERSVSYNEHRPR PPPDLPSLLLHGRIVYIGMPLV AVTELV+AEL+YLQ+MDPK PIY
Sbjct: 113  VERSVSYNEHRPRTPPPDLPSLLLHGRIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIY 172

Query: 818  LYISSTGTTRDDGETVGMESEGFAIYDAMMQLKNDIQTVGVGAAVGQACLLLAAGKKGRR 639
            +YI+STGTTRDDGE+VGME+EGFAIYD+MMQLKN+I TV VGAA+GQACLLLAAG KG R
Sbjct: 173  IYINSTGTTRDDGESVGMETEGFAIYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHR 232

Query: 638  FMMPHAKAMIQQPRLPSSGLMPASDVLIRAKEVVTNRDALVKLLARHTGNSFEKVATVMK 459
            +MMPHAKAMIQQPR+PSSGLMPASDVLIRAKE V NRD L +LLA+HTGNS E VA VMK
Sbjct: 233  YMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEAVINRDVLTELLAKHTGNSVETVANVMK 292

Query: 458  RPYYMDATQAKNFGVIDKILWRGQEKIMADAASPEEWDKKAGIKVAD 318
            RP+YMD+ +AK FGVIDKILW+GQEKIMAD   PE+WDK AGIKVAD
Sbjct: 293  RPFYMDSRRAKEFGVIDKILWQGQEKIMADVLPPEDWDKSAGIKVAD 339