BLASTX nr result

ID: Coptis23_contig00003065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003065
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82457.1| hypothetical protein VITISV_010029 [Vitis vinifera]   113   2e-23
gb|ABH02912.1| MYB transcription factor MYB71 [Glycine max]           111   5e-23
ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycin...   111   7e-23
ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
emb|CBI17787.3| unnamed protein product [Vitis vinifera]              109   2e-22

>emb|CAN82457.1| hypothetical protein VITISV_010029 [Vitis vinifera]
          Length = 336

 Score =  113 bits (282), Expect = 2e-23
 Identities = 68/146 (46%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
 Frame = +2

Query: 2   NDIKNYWNTXXXXXXXXXXXDSQARR-----QNAKDGNGMDDNSYPHTLSNSALERMQLH 166
           NDIKNYWNT            S   R     Q+ KD  G++DN Y   LSNSALER+QLH
Sbjct: 54  NDIKNYWNTRLKKKLLGKRKQSHFNRLSVAGQDPKDATGVEDNPYSQALSNSALERLQLH 113

Query: 167 MQLQTLHDPLSFYNNPALWPKLHPFGERSMQGQGGINSNSSALMRQVPDNT-QIGRFQEV 343
           MQLQ+L  P +FYNNPALWPKLHP  E+ +Q     N   S LM+  P ++ Q+G+ Q+ 
Sbjct: 114 MQLQSLQHPFAFYNNPALWPKLHPLQEKLIQNLQ--NELPSPLMQHTPPSSDQMGQEQKS 171

Query: 344 S--ELPDASI-VQRANSIISNKKQDD 412
              E P ASI +Q+ +  I+N K D+
Sbjct: 172 GFYEPPTASITLQQEHPKINNPKGDE 197


>gb|ABH02912.1| MYB transcription factor MYB71 [Glycine max]
          Length = 209

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   NDIKNYWNTXXXXXXXXXXXDSQARRQNAKD-GNGMDDNSYPHTLSNSALERMQLHMQLQ 178
           NDIKNYWNT            S     +AKD  NG+++NSY + LS+SALER+QLHMQLQ
Sbjct: 103 NDIKNYWNTRLKKKLLGRRKQSNL---SAKDTNNGIEENSYSNALSSSALERLQLHMQLQ 159

Query: 179 TLHDPLSFYNNPALWPKLHPFGERSMQGQGGINSNSSALMRQVPDNTQI 325
           +L +P SFYNNPALWPKLHPF E+ +Q    +N  SS +M+    N+ +
Sbjct: 160 SLQNPFSFYNNPALWPKLHPFQEKMIQSLQSLNDGSSPVMQNALPNSHM 208


>ref|XP_003543751.1| PREDICTED: transcription factor RAX1 [Glycine max]
          Length = 339

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/107 (52%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
 Frame = +2

Query: 2   NDIKNYWNTXXXXXXXXXXXDSQARRQNAKD-GNGMDDNSYPHTLSNSALERMQLHMQLQ 178
           NDIKNYWNT            S     +AKD  NG+++NSY + LS+SALER+QLHMQLQ
Sbjct: 103 NDIKNYWNTRLKKKLLGRRKQSNL---SAKDTNNGIEENSYSNALSSSALERLQLHMQLQ 159

Query: 179 TLHDPLSFYNNPALWPKLHPFGERSMQGQGGINSNSSALMRQVPDNT 319
           +L +P SFYNNPALWPKLHPF E+ +Q    +N  SS +M+    N+
Sbjct: 160 SLQNPFSFYNNPALWPKLHPFQEKMIQSLQSLNDGSSPVMQNALPNS 206


>ref|XP_002324486.1| predicted protein [Populus trichocarpa] gi|222865920|gb|EEF03051.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/175 (38%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
 Frame = +2

Query: 2   NDIKNYWNTXXXXXXXXXXXDSQARRQNAK--DGNGMDDNSYPHTLSNSALERMQLHMQL 175
           NDIKNYWNT            S   R ++   D NG++D+S    LSNSALER+QLHMQL
Sbjct: 103 NDIKNYWNTRLKKKLLGRRKQSSNNRLSSTNPDANGVEDSSSSQALSNSALERLQLHMQL 162

Query: 176 QTLHDPLSFYNNPALWPKLHPFGERSMQGQGGINSNSSALMRQVPDNTQIGRFQEV---S 346
           Q+L +P+SFYNNPALWPKLHPF E+ +     ++  S+ LM+    +TQ G  Q+V    
Sbjct: 163 QSLQNPISFYNNPALWPKLHPFQEKIL--LQSLSEISNPLMQYAFPSTQQGDAQKVDIYG 220

Query: 347 ELPDASIVQRANSIISNKKQDDQVENXXXXXXXXXXXXXXHTGVNTMEAAIMSKS 511
           +L D   +Q+ +   SN      +EN                G N M+  I+ ++
Sbjct: 221 QLVDPDTLQQGHPKFSNSNV-VSLENSMNVITSSDSPLPFTNGKNVMDLTIVPRA 274


>emb|CBI17787.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/148 (43%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
 Frame = +2

Query: 2   NDIKNYWNTXXXXXXXXXXXDSQARR-----QNAKDGNGMDDNSYPHTLSNSALERMQLH 166
           NDIKNYWNT            S   R     Q+ KD  G++DN Y   LSNSALER+QLH
Sbjct: 104 NDIKNYWNTRLKKKLLGKRKQSHFNRLSVAGQDPKDATGVEDNPYSQALSNSALERLQLH 163

Query: 167 MQLQTLHDPLSFYNNPALWPKLHPFGERSMQGQGGINSNSSALMRQVPDNTQ-IGRFQEV 343
           MQLQ+L  P +FYNNPALWPKLHP  E+ +Q     N   S LM+  P ++  +G+ Q+ 
Sbjct: 164 MQLQSLQHPFAFYNNPALWPKLHPLQEKLIQNLQ--NELPSPLMQHTPPSSDPMGQEQKS 221

Query: 344 S--ELPDASIVQRANSIISNKKQDDQVE 421
              E P ASI  +     +N  + D+ E
Sbjct: 222 GFYEPPTASITLQQEYPKTNNPKGDEFE 249


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