BLASTX nr result

ID: Coptis23_contig00003061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003061
         (1334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48205.1| unknown [Medicago truncatula]                          221   3e-55
ref|XP_003526792.1| PREDICTED: pheophorbidase-like [Glycine max]      219   2e-54
gb|AFK43530.1| unknown [Lotus japonicus]                              217   6e-54
ref|NP_001237523.1| uncharacterized protein LOC100527539 [Glycin...   217   6e-54
ref|XP_003523289.1| PREDICTED: pheophorbidase isoform 1 [Glycine...   216   1e-53

>gb|AFK48205.1| unknown [Medicago truncatula]
          Length = 282

 Score =  221 bits (564), Expect = 3e-55
 Identities = 118/252 (46%), Positives = 163/252 (64%), Gaps = 23/252 (9%)
 Frame = -3

Query: 933 LETHFVLVHGIGSGGWSWFKIRALLEEAGFKVSCPDLKSAGIDPTDVNSIHTLEEYDQPL 754
           L+ HFVLVHGIG GGW W+KIR L+E +G+KVSC DLKSAGI+ +D +S+ + ++Y+QPL
Sbjct: 27  LKQHFVLVHGIGGGGWCWYKIRCLMENSGYKVSCIDLKSAGINQSDADSVLSFDDYNQPL 86

Query: 753 IDLLST-SESERIILVGHSAGGISLTHMIHKFPKKIHTAVFVAATMLRNGFLTDSDCKDG 577
           +D +S+  E+E++ILVGHSAGG+S+TH  HKF KKI  AV+VAATML+ GF TD D +DG
Sbjct: 87  LDFMSSLPENEQVILVGHSAGGLSITHACHKFAKKICLAVYVAATMLKLGFCTDEDLRDG 146

Query: 576 LPDCSEL----------------TEFMI-----TEKAFHMCSRQDKTLASSLQKPGPMLA 460
           +PD SE                 T  +I      E  F++   +D TLA+ + +PGP+LA
Sbjct: 147 VPDLSEFGDVYQLGFGLGIDKPPTSALIKKEFQREVIFNLSPHEDCTLAAMMLRPGPILA 206

Query: 459 LQNAKFXXXXXXXXXXXXXVKTKQDLLLTPEQQDAMVKKWLPASSTTLD-SDHCPHLSKP 283
           L +A+F             ++TK D ++ PEQQ+AM+K+W P +   L+ SDH P  S P
Sbjct: 207 LTSARFKESNEAEKVPRVYIRTKHDKVVKPEQQEAMIKRWPPLNVYELENSDHSPFFSTP 266

Query: 282 CELFHTLIIVAA 247
             LF  L+  AA
Sbjct: 267 FILFGVLVKAAA 278


>ref|XP_003526792.1| PREDICTED: pheophorbidase-like [Glycine max]
          Length = 276

 Score =  219 bits (557), Expect = 2e-54
 Identities = 117/252 (46%), Positives = 160/252 (63%), Gaps = 23/252 (9%)
 Frame = -3

Query: 933 LETHFVLVHGIGSGGWSWFKIRALLEEAGFKVSCPDLKSAGIDPTDVNSIHTLEEYDQPL 754
           L  HFVLVHGIG G W W+KIR L+E +G+KVSC DLKSAGID +D +S+ + ++Y++PL
Sbjct: 16  LNQHFVLVHGIGGGSWCWYKIRCLMENSGYKVSCIDLKSAGIDQSDADSVLSFDDYNKPL 75

Query: 753 IDLLS-TSESERIILVGHSAGGISLTHMIHKFPKKIHTAVFVAATMLRNGFLTDSDCKDG 577
           +D +S   E+E++ILVGHSAGG+S+T   HKF  KI  AV+VAATML+ GFLTD D KDG
Sbjct: 76  MDFMSDLPENEQVILVGHSAGGLSITQACHKFANKIRLAVYVAATMLKFGFLTDQDHKDG 135

Query: 576 LPDCSELTEF---------------MITEKAFH------MCSRQDKTLASSLQKPGPMLA 460
           +PD SE  +                 + +K F       +   +D TLA+ L +PGP+LA
Sbjct: 136 VPDLSEYGDVYELGFGLGHDKPPTSALVKKEFQRKIIYPLSPHEDSTLAAMLLRPGPLLA 195

Query: 459 LQNAKF-XXXXXXXXXXXXXVKTKQDLLLTPEQQDAMVKKWLPASSTTLDSDHCPHLSKP 283
           L +A+F              ++T+ D ++ PEQQ+AM+K+W P++S  LDSDH P  S P
Sbjct: 196 LMSAQFREDGDEVEKVRRVYIRTRHDKVVKPEQQEAMIKRWPPSTSYELDSDHSPFFSTP 255

Query: 282 CELFHTLIIVAA 247
             LF  L+  AA
Sbjct: 256 FLLFGLLLKAAA 267


>gb|AFK43530.1| unknown [Lotus japonicus]
          Length = 285

 Score =  217 bits (552), Expect = 6e-54
 Identities = 114/255 (44%), Positives = 160/255 (62%), Gaps = 22/255 (8%)
 Frame = -3

Query: 930 ETHFVLVHGIGSGGWSWFKIRALLEEAGFKVSCPDLKSAGIDPTDVNSIHTLEEYDQPLI 751
           + HFVLVHGI  G W W+KIR L+E  G+KVSC DLKSAGID +  +S+ + ++Y+QPL+
Sbjct: 27  QQHFVLVHGISGGSWCWYKIRCLMENPGYKVSCIDLKSAGIDQSVADSVLSFDDYNQPLM 86

Query: 750 DLLST-SESERIILVGHSAGGISLTHMIHKFPKKIHTAVFVAATMLRNGFLTDSDCKDGL 574
           D +S   ++E++ILVGHSAGG+S+T   HKF +KI+ AV+VAATML+ GF TD D KDG+
Sbjct: 87  DFMSALPDNEKVILVGHSAGGLSITQACHKFAEKINLAVYVAATMLKLGFCTDEDLKDGV 146

Query: 573 PDCSEL----------------TEFMITEK-----AFHMCSRQDKTLASSLQKPGPMLAL 457
           PD SE                 T  ++ ++      + +   +D TLAS L +PGP+LAL
Sbjct: 147 PDLSEFGDVYQLGLGLGRDKPPTSALVKKELQRKIIYPLSPHEDSTLASMLLRPGPILAL 206

Query: 456 QNAKFXXXXXXXXXXXXXVKTKQDLLLTPEQQDAMVKKWLPASSTTLDSDHCPHLSKPCE 277
            +A+F             ++T+ D ++ PEQQ+AM+K+W P S   LDSDH P  S P  
Sbjct: 207 TSARFTEEGEVETVPRVYIRTRHDNVVKPEQQEAMIKRWPPLSVYELDSDHSPFFSNPFL 266

Query: 276 LFHTLIIVAAKGIIT 232
           LF  L+  AA  I++
Sbjct: 267 LFGFLVKAAAFDIVS 281


>ref|NP_001237523.1| uncharacterized protein LOC100527539 [Glycine max]
           gi|255632570|gb|ACU16635.1| unknown [Glycine max]
          Length = 283

 Score =  217 bits (552), Expect = 6e-54
 Identities = 118/247 (47%), Positives = 153/247 (61%), Gaps = 22/247 (8%)
 Frame = -3

Query: 933 LETHFVLVHGIGSGGWSWFKIRALLEEAGFKVSCPDLKSAGIDPTDVNSIHTLEEYDQPL 754
           L+ HFVLVHG+G  GW W+KIR L+E +GFKVSC DLKSAGID +DV+S+ + ++Y+QPL
Sbjct: 25  LKQHFVLVHGVGGRGWCWYKIRCLMENSGFKVSCIDLKSAGIDQSDVDSVLSFDDYNQPL 84

Query: 753 IDLLST-SESERIILVGHSAGGISLTHMIHKFPKKIHTAVFVAATMLRNGFLTDSDCKDG 577
           +DLLS   E+E++ILVGHSAGG+S+T   HKF KKI  AV+VAATML+ GFLTD D K G
Sbjct: 85  MDLLSALPENEQVILVGHSAGGLSVTQACHKFAKKIRLAVYVAATMLKLGFLTDEDLKHG 144

Query: 576 LPDCSELTEF---------------MITEKAFH------MCSRQDKTLASSLQKPGPMLA 460
           +PD SE  +                 + +K F       +   +D TLA+ L +PGP+LA
Sbjct: 145 VPDLSEFGDVYRLGFGLGQDKPPTSALVKKEFQRKIIYPLSPHEDSTLAAMLLRPGPILA 204

Query: 459 LQNAKFXXXXXXXXXXXXXVKTKQDLLLTPEQQDAMVKKWLPASSTTLDSDHCPHLSKPC 280
           L +A F              K   D +L PEQQ+AM+K+W       LDSDH P  S P 
Sbjct: 205 LTSAMFVEDGEVEKGAEGVHKDNADNVLKPEQQEAMIKRWPLLYVYELDSDHSPFFSTPF 264

Query: 279 ELFHTLI 259
            LF  L+
Sbjct: 265 LLFGLLV 271


>ref|XP_003523289.1| PREDICTED: pheophorbidase isoform 1 [Glycine max]
          Length = 271

 Score =  216 bits (550), Expect = 1e-53
 Identities = 116/255 (45%), Positives = 161/255 (63%), Gaps = 26/255 (10%)
 Frame = -3

Query: 933 LETHFVLVHGIGSGGWSWFKIRALLEEAGFKVSCPDLKSAGIDPTDVNSIHTLEEYDQPL 754
           ++ HFVLVHGIG G W W+KIR L+E +G KVSC DLKSAGID +D +S+ + ++Y++PL
Sbjct: 11  MKQHFVLVHGIGGGSWCWYKIRCLMENSGCKVSCIDLKSAGIDQSDADSVLSFDDYNKPL 70

Query: 753 IDLLS-TSESERIILVGHSAGGISLTHMIHKFPKKIHTAVFVAATMLRNGFLTDSDCKDG 577
           +D +S   E+E++ILVGHSAGG+S+T   HKF  KI  AV+VAATML+ GFLTD D KDG
Sbjct: 71  MDFMSDLPENEQVILVGHSAGGLSITQACHKFANKIRLAVYVAATMLKFGFLTDQDLKDG 130

Query: 576 LPDCSEL----------------TEFMITEKAFH-----MCSRQDKTLASSLQKPGPMLA 460
           +PD SE                 T  ++ ++  H     +   +D TLA+ L +PGP+LA
Sbjct: 131 VPDLSEYGDVYELGFGLGHDKPPTSALVKKEFQHKIIYPLSPHEDSTLAAMLLRPGPLLA 190

Query: 459 LQNAKF----XXXXXXXXXXXXXVKTKQDLLLTPEQQDAMVKKWLPASSTTLDSDHCPHL 292
           L +A+F                 ++T+ D ++ PEQQ+AM+K+W P++S  LDSDH P  
Sbjct: 191 LTSAQFREDGDGDGEVEKVCRVYIRTRHDKVVKPEQQEAMIKRWPPSTSYELDSDHSPFF 250

Query: 291 SKPCELFHTLIIVAA 247
           S P  LF  L+  AA
Sbjct: 251 STPFLLFGLLLKAAA 265


Top