BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003052
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   283   4e-74
gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   267   2e-69
ref|XP_003527126.1| PREDICTED: zinc finger protein GIS2-like [Gl...   261   9e-68
gb|ABK24177.1| unknown [Picea sitchensis]                             258   1e-66
ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [C...   257   2e-66

>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
           gi|296086261|emb|CBI31702.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  283 bits (723), Expect = 4e-74
 Identities = 133/238 (55%), Positives = 145/238 (60%)
 Frame = +2

Query: 11  RSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQC 190
           R +RQDYLC  CKRPGHFARDCPNV VCNNCGLPGHIAAECN+ TMCWNCKESGH+ASQC
Sbjct: 33  RVHRQDYLCNKCKRPGHFARDCPNVTVCNNCGLPGHIAAECNSTTMCWNCKESGHLASQC 92

Query: 191 KNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLPLHDSRLCNN 370
            N+P                                            GLP HD+RLCNN
Sbjct: 93  PNDP--------------------------VCHMCGKMGHLARDCSSPGLPAHDARLCNN 126

Query: 371 CYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNVXXXXXXXXXXXXXXXXXXX 550
           CYKPGHIA DCTNEKACNNC KTGHLAR+C NEPVCN+CN+                   
Sbjct: 127 CYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNI--------------SGHVA 172

Query: 551 XXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVGIVICHNCGGRGHQAYECPSGRM 724
                           RDI C +CGQPGHISRDCV IVIC+NCGGRGHQ++ECPS RM
Sbjct: 173 RQCPKSRLVPETGGPFRDITCHNCGQPGHISRDCVSIVICNNCGGRGHQSFECPSVRM 230


>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  267 bits (682), Expect = 2e-69
 Identities = 125/238 (52%), Positives = 142/238 (59%)
 Frame = +2

Query: 11  RSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVASQC 190
           R +RQD +CKNCKRPGHFARDC ++AVCNNCGLPGHIAAEC AKT+CWNCKE GH+A++C
Sbjct: 37  RGFRQDVICKNCKRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTLCWNCKEPGHMANEC 96

Query: 191 KNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLPLHDSRLCNN 370
            NE                                            SGL   D+RLCNN
Sbjct: 97  SNE--------------------------AVCHNCNKTGHLARDCSASGLSSFDTRLCNN 130

Query: 371 CYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNVXXXXXXXXXXXXXXXXXXX 550
           C++PGHIA DCTN+K CNNCRK GHLAREC N+PVCN+CNV                   
Sbjct: 131 CHRPGHIAADCTNDKTCNNCRKPGHLARECTNDPVCNVCNV-------------SGHVAR 177

Query: 551 XXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVGIVICHNCGGRGHQAYECPSGRM 724
                           RDI+CR C QPGHISRDCVGIVIC+ CGGRGH AYECPSGR+
Sbjct: 178 QCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVICNTCGGRGHMAYECPSGRL 235


>ref|XP_003527126.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
          Length = 259

 Score =  261 bits (668), Expect = 9e-68
 Identities = 121/241 (50%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
 Frame = +2

Query: 2   DSRRSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVA 181
           DSRR + +D LCKNCKRPGH+AR+CPNVA+C+NCGLPGHIA+EC  K++CWNCKE GH+A
Sbjct: 36  DSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMA 95

Query: 182 SQCKNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLPLHDSRL 361
           S C NE                                              +P  D RL
Sbjct: 96  SSCPNEGICHTCGKAGHRARECSAPP--------------------------MPPGDLRL 129

Query: 362 CNNCYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNVXXXXXXXXXXXXXXXX 541
           CNNCYK GHIA +CTNEKACNNCRKTGHLAR+CPN+P+CNLCNV                
Sbjct: 130 CNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGD 189

Query: 542 XXXXXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVG-IVICHNCGGRGHQAYECPSG 718
                              RD++CR+C Q GH+SRDC+G ++ICHNCGGRGH AYECPSG
Sbjct: 190 RSGGGGGGGGARGGGGGGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSG 249

Query: 719 R 721
           R
Sbjct: 250 R 250



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 36/122 (29%), Positives = 47/122 (38%)
 Frame = +2

Query: 359 LCNNCYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNVXXXXXXXXXXXXXXX 538
           LC NC +PGH A +C N   C+NC   GH+A EC  +                       
Sbjct: 46  LCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKS---------------------- 83

Query: 539 XXXXXXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVGIVICHNCGGRGHQAYECPSG 718
                                  LC +C +PGH++  C    ICH CG  GH+A EC + 
Sbjct: 84  -----------------------LCWNCKEPGHMASSCPNEGICHTCGKAGHRARECSAP 120

Query: 719 RM 724
            M
Sbjct: 121 PM 122


>gb|ABK24177.1| unknown [Picea sitchensis]
          Length = 248

 Score =  258 bits (658), Expect = 1e-66
 Identities = 124/241 (51%), Positives = 138/241 (57%)
 Frame = +2

Query: 2   DSRRSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVA 181
           D RRS R D  CKNCKRPGHFARDCPNV+VCNNCGLPGHIA EC  K++CWNC+E GHVA
Sbjct: 32  DFRRS-RSDDACKNCKRPGHFARDCPNVSVCNNCGLPGHIAVECTTKSLCWNCREPGHVA 90

Query: 182 SQCKNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLPLHDSRL 361
           SQC N+P                                             LP  D RL
Sbjct: 91  SQCSNDPICHTCGKSGHLSRDCTAPE--------------------------LPPGDIRL 124

Query: 362 CNNCYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNVXXXXXXXXXXXXXXXX 541
           CNNCYK GHIA +CTNEKACNNCRKTGHLAR+C N PVCNLCN+                
Sbjct: 125 CNNCYKQGHIAAECTNEKACNNCRKTGHLARDCTNSPVCNLCNI-----SGHVARECPKG 179

Query: 542 XXXXXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVGIVICHNCGGRGHQAYECPSGR 721
                               DI+CR+C +PGH SR+C  I+ICHNCGGRGH AYECPSGR
Sbjct: 180 RILDDNRGGRFMDERRGRFNDIICRTCNEPGHTSRECTPILICHNCGGRGHVAYECPSGR 239

Query: 722 M 724
           +
Sbjct: 240 V 240


>ref|XP_004148537.1| PREDICTED: DNA-binding protein HEXBP-like [Cucumis sativus]
           gi|449519884|ref|XP_004166964.1| PREDICTED: DNA-binding
           protein HEXBP-like [Cucumis sativus]
          Length = 260

 Score =  257 bits (656), Expect = 2e-66
 Identities = 121/242 (50%), Positives = 143/242 (59%), Gaps = 2/242 (0%)
 Frame = +2

Query: 2   DSRRSYRQDYLCKNCKRPGHFARDCPNVAVCNNCGLPGHIAAECNAKTMCWNCKESGHVA 181
           +SRR + +D LCKNCKRPGHFAR+CPNVA+C+NCGLPGHIA+EC  K++CWNC+E GH+A
Sbjct: 36  ESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHMA 95

Query: 182 SQCKNEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLPLHDSRL 361
           S C NE                                              +P  D RL
Sbjct: 96  SSCPNE--------------------------GICHTCGKAGHRARDCTAPPMPPGDLRL 129

Query: 362 CNNCYKPGHIAVDCTNEKACNNCRKTGHLARECPNEPVCNLCNV-XXXXXXXXXXXXXXX 538
           CNNCYK GHIA DCTNEKACNNCRKTGHLAR+CPN+P+CNLCNV                
Sbjct: 130 CNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGD 189

Query: 539 XXXXXXXXXXXXXXXXXXXXRDILCRSCGQPGHISRDCVG-IVICHNCGGRGHQAYECPS 715
                               RD++CR+C Q GH+SRDC+G ++ICHNCGGRGH AYECPS
Sbjct: 190 RGDRGISSGGGSGRGSGSGYRDVVCRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPS 249

Query: 716 GR 721
           GR
Sbjct: 250 GR 251