BLASTX nr result

ID: Coptis23_contig00003044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003044
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60859.1| hypothetical protein VITISV_032629 [Vitis vinifera]   318   2e-84
ref|XP_002277011.2| PREDICTED: probable carboxylesterase 8-like ...   317   3e-84
ref|XP_002511752.1| Gibberellin receptor GID1, putative [Ricinus...   315   9e-84
ref|XP_002320078.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
dbj|BAJ53145.1| JHL05D22.16 [Jatropha curcas]                         308   2e-81

>emb|CAN60859.1| hypothetical protein VITISV_032629 [Vitis vinifera]
          Length = 336

 Score =  318 bits (814), Expect = 2e-84
 Identities = 157/319 (49%), Positives = 223/319 (69%), Gaps = 12/319 (3%)
 Frame = -3

Query: 925 IDPYKYINVVLNPDGTLTR----PTLXXXXXXXXXXXXXXXXSLDITLNPYKNTWMRVFQ 758
           +D YK + +V NPDG+LTR    P++                S D+ LNP  NT++R+F+
Sbjct: 11  MDAYKSLGLVPNPDGSLTRSSPFPSVPATDETTATTDTAVAFSKDVPLNPANNTFLRIFR 70

Query: 757 PTNLSSNKKLPLIIYFHGGGFILYSASYAPFHESSVQMASGLPAIIISVDYSLAPENKLP 578
           P+ L  N KLP+I+YFHGGGF+L+S S  PFHES   MA+ LPA+++S++Y LAPE++LP
Sbjct: 71  PSLLPPNTKLPVILYFHGGGFVLFSVSTLPFHESCNSMAAKLPALVLSLEYRLAPEHRLP 130

Query: 577 SAYEDGVEALLWVKHRA---INGDFEFCKS-VDFSKCYIMGSSSGGNITYQVGLRALSLD 410
           +AYED  EA++WV+ +A   I+G   + +   DFSKC++MGSS+G N+ +  G+RAL  D
Sbjct: 131 AAYEDAFEAIMWVRSQAAAEIDGGEPWLREYADFSKCFLMGSSAGANMVFHAGVRALDAD 190

Query: 409 LEPVKIIGLIMIQPFFGGLERTESELKMVNDRIIPLAVTDLMWLLALPMGADKDHEFCNP 230
           L  +KI GLI+ Q +FGG+ERTESEL++ +DR++PL   DL+W+LALP GAD+DHE+ NP
Sbjct: 191 LGAMKIQGLILNQAYFGGVERTESELRLADDRVVPLPANDLLWVLALPNGADRDHEYSNP 250

Query: 229 MG----AHFNNIKRLPRCFVNGYGGDPLVDCQKEFSKMLGDQGACVVENYSDDGYHGCEL 62
           M     +H   I RL +C V GYGGDPLVD Q+ F++M+  +G  VV  ++D G+HG E+
Sbjct: 251 MAGGSQSHQEKIGRLQKCLVRGYGGDPLVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEI 310

Query: 61  FIPDKAQALVMNVKDFIYS 5
           F P +A+AL  +VK+FIYS
Sbjct: 311 FDPSQAEALYNDVKNFIYS 329


>ref|XP_002277011.2| PREDICTED: probable carboxylesterase 8-like [Vitis vinifera]
          Length = 336

 Score =  317 bits (812), Expect = 3e-84
 Identities = 156/319 (48%), Positives = 222/319 (69%), Gaps = 12/319 (3%)
 Frame = -3

Query: 925 IDPYKYINVVLNPDGTLTR----PTLXXXXXXXXXXXXXXXXSLDITLNPYKNTWMRVFQ 758
           +D YK + +V NPDG+LTR    P++                S D+ LNP  NT++R+++
Sbjct: 11  MDAYKSLGLVPNPDGSLTRSSPFPSVPATDETTAATDTAVAFSKDVPLNPANNTFLRIYR 70

Query: 757 PTNLSSNKKLPLIIYFHGGGFILYSASYAPFHESSVQMASGLPAIIISVDYSLAPENKLP 578
           P+ L  N KLP+I+YFHGGGF+L+S S  PFH+S   MA+ LPA+++S++Y LAPE++LP
Sbjct: 71  PSLLPPNTKLPVILYFHGGGFVLFSVSNLPFHKSCNSMAAKLPALVLSLEYRLAPEHRLP 130

Query: 577 SAYEDGVEALLWVKHRA---INGDFEFCKS-VDFSKCYIMGSSSGGNITYQVGLRALSLD 410
           +AYED  EA++WV+ +A   I+G   + +   DFSKC++MG S+G NI +  G+RAL  D
Sbjct: 131 AAYEDAFEAIMWVRSQAAAEIDGGEPWLREYADFSKCFLMGGSAGANIVFHAGVRALDAD 190

Query: 409 LEPVKIIGLIMIQPFFGGLERTESELKMVNDRIIPLAVTDLMWLLALPMGADKDHEFCNP 230
           L  +KI GL++ QP+FGG+ERTESEL++ +DRI+PL   DL+W LALP GAD+DHE+ NP
Sbjct: 191 LGAMKIQGLVLNQPYFGGVERTESELRLADDRIVPLPANDLLWALALPNGADRDHEYSNP 250

Query: 229 MG----AHFNNIKRLPRCFVNGYGGDPLVDCQKEFSKMLGDQGACVVENYSDDGYHGCEL 62
           M     +H   I RL +C V GYGGDPLVD Q+ F++M+  +G  VV  ++D G+HG E+
Sbjct: 251 MAGGSQSHQEKIGRLQKCLVRGYGGDPLVDRQRRFAEMMEARGVHVVAKFNDGGHHGVEI 310

Query: 61  FIPDKAQALVMNVKDFIYS 5
           F P +A+AL  +VK+FIYS
Sbjct: 311 FDPSQAEALYNDVKNFIYS 329


>ref|XP_002511752.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223548932|gb|EEF50421.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 340

 Score =  315 bits (808), Expect = 9e-84
 Identities = 162/320 (50%), Positives = 214/320 (66%), Gaps = 13/320 (4%)
 Frame = -3

Query: 931 TVIDPYKYINVVLNPDGTLTR-PTLXXXXXXXXXXXXXXXXSL----DITLNPYKNTWMR 767
           TV+DPY ++N+  NPDG+L+R P                   L    DI LNP   T++R
Sbjct: 15  TVMDPYAFLNISRNPDGSLSRNPPFPDVPPVDQFIPESNLPQLALSRDIPLNPNNKTYIR 74

Query: 766 VFQPTNLSSNKKLPLIIYFHGGGFILYSASYAPFHESSVQMASGLPAIIISVDYSLAPEN 587
           +F P +   + KLP+IIYFHGGGFILYS +   FHES   +AS +PA+I+SV Y L+PE+
Sbjct: 75  IFCPLHPPQDTKLPVIIYFHGGGFILYSPASVIFHESCNNVASHIPALILSVHYRLSPEH 134

Query: 586 KLPSAYEDGVEALLWVKHRAINGDFE------FCKSVDFSKCYIMGSSSGGNITYQVGLR 425
           +LP+AY+D ++A++WV+ +A   D             DFS C++MGSSSGGNI YQ GLR
Sbjct: 135 RLPAAYDDAMDAIMWVRDQAQESDNNGSCDPWLKDYADFSNCFLMGSSSGGNIVYQAGLR 194

Query: 424 ALSLDLEPVKIIGLIMIQPFFGGLERTESELKMVNDRIIPLAVTDLMWLLALPMGADKDH 245
           A+ +DL PV I GLIM  P+F G++RT+SE+ ++NDRI+PLA  DLMW LALP   D+DH
Sbjct: 195 AVDIDLCPVTIRGLIMNVPYFSGVQRTDSEMILINDRILPLAANDLMWSLALPKDVDRDH 254

Query: 244 EFCNPM--GAHFNNIKRLPRCFVNGYGGDPLVDCQKEFSKMLGDQGACVVENYSDDGYHG 71
           E+CNPM  G++   I RLP C++ GYGGDPLVD QKEF+K L   G  VV ++S+DG+H 
Sbjct: 255 EYCNPMVTGSNDEQIGRLPMCYIRGYGGDPLVDKQKEFAKKLQSNGVKVVSSFSEDGFHA 314

Query: 70  CELFIPDKAQALVMNVKDFI 11
            ELF P KAQ L  +VK FI
Sbjct: 315 VELFDPLKAQPLYDDVKTFI 334


>ref|XP_002320078.1| predicted protein [Populus trichocarpa] gi|222860851|gb|EEE98393.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  311 bits (796), Expect = 2e-82
 Identities = 157/314 (50%), Positives = 212/314 (67%), Gaps = 9/314 (2%)
 Frame = -3

Query: 925 IDPYKYINVVLNPDGTLTRPTLXXXXXXXXXXXXXXXXSL-----DITLNPYKNTWMRVF 761
           +DPY+++++  NPDG+L R  L                       DI LNP KNT++R+F
Sbjct: 1   MDPYEFLHLSPNPDGSLARNYLFPSVPPVEKPLSDPNKPQLALSKDIPLNPTKNTFIRIF 60

Query: 760 QPTNLSSNKKLPLIIYFHGGGFILYSASYAPFHESSVQMASGLPAIIISVDYSLAPENKL 581
            P+N   + KLP+I+YFHGGGF+L+S +  PFH+S   MAS  PA+I+SV+Y LAPE++L
Sbjct: 61  LPSNQPPSTKLPVILYFHGGGFVLFSVASLPFHQSCCAMASNFPALILSVEYRLAPEHRL 120

Query: 580 PSAYEDGVEALLWVKHRAINGDFEFCKSV-DFSKCYIMGSSSGGNITYQVGLRALSLDLE 404
           P+AY+D +++L WV+ +AINGD  + K   D SK ++MGSS+GGNI Y   LRAL  DL 
Sbjct: 121 PAAYDDAMDSLAWVRDQAINGDDPWLKEYGDLSKFFLMGSSAGGNIVYHAALRALDADLS 180

Query: 403 PVKIIGLIMIQPFFGGLERTESELKMVNDRIIPLAVTDLMWLLALPMGADKDHEFCNPMG 224
            ++I GLIM  P+FGG+ RTESE+++ +D+I+P+   DL+W LALP  AD+DHE+CNP+ 
Sbjct: 181 SIRIKGLIMNVPYFGGVNRTESEIRLKDDKILPMPANDLLWSLALPKDADRDHEYCNPIV 240

Query: 223 AHFNN---IKRLPRCFVNGYGGDPLVDCQKEFSKMLGDQGACVVENYSDDGYHGCELFIP 53
           A  N+   I+RLP C+V  YGGDPL D QKEFSKML   G  VV +   DGYH  ELF P
Sbjct: 241 AGSNDDGKIRRLPMCYVKIYGGDPLSDKQKEFSKMLESLGVHVVTSSDPDGYHAVELFDP 300

Query: 52  DKAQALVMNVKDFI 11
            KA+A    VK+FI
Sbjct: 301 RKAKAFYDEVKEFI 314


>dbj|BAJ53145.1| JHL05D22.16 [Jatropha curcas]
          Length = 321

 Score =  308 bits (789), Expect = 2e-81
 Identities = 156/317 (49%), Positives = 212/317 (66%), Gaps = 12/317 (3%)
 Frame = -3

Query: 925 IDPYKYINVVLNPDGTLTR-PTLXXXXXXXXXXXXXXXXSL----DITLNPYKNTWMRVF 761
           +DPY ++ +  NPDG+LTR P                   L    D++LNP   T++R+F
Sbjct: 1   MDPYAFLKISRNPDGSLTRNPPFPDVPPVDQPVTDPNSPQLSLSKDVSLNPTTKTYIRIF 60

Query: 760 QPTNLSSNKKLPLIIYFHGGGFILYSASYAPFHESSVQMASGLPAIIISVDYSLAPENKL 581
           +P N   + KLP+IIYFHGGGFILY+ +   FHES  +MAS   A+I+SV Y L PE++L
Sbjct: 61  RPLNAPPDAKLPIIIYFHGGGFILYTPASVIFHESCNRMASEFQALILSVHYRLGPEHRL 120

Query: 580 PSAYEDGVEALLWVKHRAINGDFEFCK-----SVDFSKCYIMGSSSGGNITYQVGLRALS 416
           P+AY+D ++A+ WV+ +A   D   C      + DFSKC +MGSSSGGNI YQ GLRAL 
Sbjct: 121 PAAYDDAMDAITWVRDQARGMDD--CDPWLKDNGDFSKCLLMGSSSGGNIVYQAGLRALD 178

Query: 415 LDLEPVKIIGLIMIQPFFGGLERTESELKMVNDRIIPLAVTDLMWLLALPMGADKDHEFC 236
           ++L P+KI+G+IM  P+F G++RTESE++++ D+I+PL   DLMW LALP  AD+DHE+C
Sbjct: 179 MELSPIKIVGMIMNVPYFSGVQRTESEMRLIEDKILPLPANDLMWSLALPKDADRDHEYC 238

Query: 235 NPM--GAHFNNIKRLPRCFVNGYGGDPLVDCQKEFSKMLGDQGACVVENYSDDGYHGCEL 62
           NPM  G++   I RLP C+V GYGGDPLVD QKE +K L  +G  V  ++ +DG+H  EL
Sbjct: 239 NPMVEGSYEEKIGRLPICYVRGYGGDPLVDKQKEMAKKLESKGVKVESSFIEDGFHAVEL 298

Query: 61  FIPDKAQALVMNVKDFI 11
           F P KA++L   VK FI
Sbjct: 299 FDPSKAESLYAEVKVFI 315


Top