BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003040
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    84   3e-14
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    77   4e-12
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               77   4e-12
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    73   4e-11
ref|XP_004150849.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...    70   3e-10

>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = +2

Query: 158 NSSTTISKLDSLVADLPRVSATG---MCMVCMEDFNGETDEAKQMPCSHAYHATCISRWI 328
           N    IS+ DSLVAD+P V++T    +C +CME F       KQ+PC H YHA CIS W+
Sbjct: 32  NFGHQISESDSLVADMPTVTSTDDHDVCSICMEGFQSPGVCGKQVPCGHVYHAPCISSWL 91

Query: 329 SQYNSCPLCRCRISTT 376
           S  NSCPLCR  IS T
Sbjct: 92  SNCNSCPLCRFNISAT 107


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 34/73 (46%), Positives = 46/73 (63%)
 Frame = +2

Query: 149 TQKNSSTTISKLDSLVADLPRVSATGMCMVCMEDFNGETDEAKQMPCSHAYHATCISRWI 328
           T  + ++ ISK  S+V+ +P V+A   C VC E F    +  KQ+PC H YHA CI+ W+
Sbjct: 27  TAVDDTSEISKSTSMVSTMPTVTAVDACTVCREGFQSG-EGGKQLPCGHFYHAGCIASWL 85

Query: 329 SQYNSCPLCRCRI 367
           S  NSCPLCRC +
Sbjct: 86  SLRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 34/73 (46%), Positives = 46/73 (63%)
 Frame = +2

Query: 149 TQKNSSTTISKLDSLVADLPRVSATGMCMVCMEDFNGETDEAKQMPCSHAYHATCISRWI 328
           T  + ++ ISK  S+V+ +P V+A   C VC E F    +  KQ+PC H YHA CI+ W+
Sbjct: 93  TAVDDTSEISKSTSMVSTMPTVTAVDACTVCREGFQSG-EGGKQLPCGHFYHAGCIASWL 151

Query: 329 SQYNSCPLCRCRI 367
           S  NSCPLCRC +
Sbjct: 152 SLRNSCPLCRCSV 164


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
 Frame = +2

Query: 167 TTISKLDSLVADLPRVSATG-MCMVCMEDFNGETDEAKQMPCSHAYHATCISRWISQYNS 343
           T ++    +VA+LP V+A   +C VCMEDF  + +  KQ+PC H YH +C+S W+S  +S
Sbjct: 36  TVVAPPPVMVAELPTVAAADDVCAVCMEDFLPD-EGGKQIPCGHVYHQSCLSSWLSIRDS 94

Query: 344 CPLCRCRIS 370
           CPLCRC I+
Sbjct: 95  CPLCRCHIA 103


>ref|XP_004150849.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis
           sativus] gi|449488131|ref|XP_004157947.1| PREDICTED: E3
           ubiquitin-protein ligase RNF181-like [Cucumis sativus]
          Length = 115

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +2

Query: 173 ISKLDSLVADLPRVSATGMCMVCMEDFNGETDEAKQMPCSHAYHATCISRWISQYNSCPL 352
           I+  DS VAD P V A  +C VC++DF+ + +  KQ+PC H YH +CIS W++  + CPL
Sbjct: 41  ITPSDSPVADFPTVVAD-VCAVCLDDFHPD-EAGKQIPCGHVYHESCISSWLTVADCCPL 98

Query: 353 CRCRIS 370
           CRC ++
Sbjct: 99  CRCLVA 104