BLASTX nr result
ID: Coptis23_contig00003032
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003032
(1562 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Popul... 119 2e-24
ref|XP_002283439.2| PREDICTED: probable disease resistance prote... 101 5e-19
ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichoca... 94 8e-17
ref|XP_002283414.1| PREDICTED: probable disease resistance prote... 92 3e-16
emb|CBI20163.3| unnamed protein product [Vitis vinifera] 87 9e-15
>ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222862575|gb|EEF00082.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1159
Score = 119 bits (298), Expect = 2e-24
Identities = 139/559 (24%), Positives = 236/559 (42%), Gaps = 83/559 (14%)
Frame = -2
Query: 1561 LLLSRCKQLKRIPSVAKLQLLEVLRLDLS---ALTELPEGMEALVNLKILDLWQADLREV 1391
LLL C+ L+ +PS+ KL+ L+ RLDLS AL ++P+ M+ L NL+ L + E
Sbjct: 604 LLLEECENLRHVPSLEKLRALK--RLDLSGTWALEKIPQDMQCLSNLRYLRMNGCGEMEF 661
Query: 1390 PIILILKFSLLQELCLDHLRERESGIT-SMEDLLSLRQMENLTVHFPCLSNFI--INSQI 1220
P ++ S LQ L+ + + +T + E++ LR++ENL HF S+F+ +NS+
Sbjct: 662 PSGILPILSHLQVFILEEIDDDFIPVTVTGEEVGCLRELENLVCHFEGQSDFVEYLNSRD 721
Query: 1219 -TKGLNKFN----------------------------------FMVADPNEWRDMELKMF 1145
T+ L+ ++ F V PN+ +++ +
Sbjct: 722 KTRSLSTYSIFVGPLDEYCSEIADHGGSKTVWLGNLCNNGDGDFQVMFPNDIQELFIFKC 781
Query: 1144 SLENSYLYWKRL------VSVSNKIHRIPDNSLVLPQNTQ-------YLRIQQFN----- 1019
S + S L + + N + + +S P T + +++FN
Sbjct: 782 SCDVSSLIEHSIELEVIHIEDCNSMESLISSSWFCPSPTPLSSYNGVFSGLKEFNCSGCS 841
Query: 1018 DLTRFSELSCLKEARDLRECRIIACRKMKYIMSSEDVTEEQGH-----LLQHVEMLEIEK 854
+ + L L +L + C KM+ I+ EE L + L +E
Sbjct: 842 SMKKLFPLVLLPNLVNLENISVFGCEKMEEIIVGTRSDEESSSNSTEFKLPKLRYLALED 901
Query: 853 CPNVRFLFSSKLFKQFQKLEQVRVIDCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 674
P ++ + S+KL L+Q+ V +C
Sbjct: 902 LPELKRICSAKLI--CDSLQQIEVRNCKSMESLVPSSWICLVNLERIIVTGCGKMEEIIG 959
Query: 673 XXXXXXITLPSLQFIHLEKVR---------VKRLWSGITVCKSLRKLEVYACHELKTLFS 521
+ + +F L K+R +KR+ S +C SLR++EV C+ ++ L
Sbjct: 960 GTRADEESSNNTEF-KLPKLRSLESVDLPELKRICSAKLICDSLREIEVRNCNSMEILVP 1018
Query: 520 TKLLQHCPNLEVITVCRCRKMEELL--TAGEDSGEWN--TSNTTSTIRVPRLQILWLKEL 353
+ + NLE I V C KM+E++ T ++ G+ +SN + ++P+L+ L L EL
Sbjct: 1019 SSWIC-LVNLERIIVAGCGKMDEIICGTRSDEEGDIGEESSNNNTEFKLPKLRSLLLFEL 1077
Query: 352 PKLESIWKGVMACDYXXXXXXXXXXXXKRLP----QFSAEHQILPLTLKEIRAS-KEWWD 188
P+L+SI + CD KR+P P +L I KEWW+
Sbjct: 1078 PELKSICSAKLICDSLGTISIRNCENLKRMPICFPLLENGQPSPPPSLTYIYIEPKEWWE 1137
Query: 187 AL-EWDHPSEKNILQPFFK 134
++ EWDHP+ KNIL+PF K
Sbjct: 1138 SVVEWDHPNAKNILRPFVK 1156
>ref|XP_002283439.2| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
vinifera]
Length = 1276
Score = 101 bits (252), Expect = 5e-19
Identities = 65/163 (39%), Positives = 82/163 (50%), Gaps = 13/163 (7%)
Frame = -2
Query: 589 ITVCKSLRKLEVYACHELKTLFSTKLLQ-HCPNLEVITVCRCRKMEELLTAGEDSGEWNT 413
I C SL+ L V C LK LF+ +L++ H NL+ I V CR+ME+L+ A E E
Sbjct: 1085 IVRCSSLKHLYVSYCDNLKHLFTPELVKYHLKNLQSIDVGNCRQMEDLIVAAEVEEEEEE 1144
Query: 412 SNTTSTIR------VPRLQILWLKELPKLESIWKGVMACDYXXXXXXXXXXXXKRLP--- 260
R P LQ L L+ LPKL+SIWKG M CD +RLP
Sbjct: 1145 EEEVINQRHNLILYFPNLQSLTLENLPKLKSIWKGTMTCD-SLQLTVWNCPELRRLPLSV 1203
Query: 259 ---QFSAEHQILPLTLKEIRASKEWWDALEWDHPSEKNILQPF 140
S E + LK+IR KEWWD LEW+ P K+I +PF
Sbjct: 1204 QINDGSGERRASTPPLKQIRGEKEWWDGLEWNTPHAKSIFEPF 1246
Score = 84.0 bits (206), Expect = 1e-13
Identities = 100/382 (26%), Positives = 157/382 (41%), Gaps = 37/382 (9%)
Frame = -2
Query: 1561 LLLSRCKQLKRIPSVAKLQLLEVLRLDLSALTELPEGMEALVNLKILDLWQADLREVPII 1382
L+L C +L R+ S+AKL+ L L L + + +PEG+E LV+LK + P+
Sbjct: 843 LILCFCPKLNRVDSLAKLKELRELNLCSNEMETIPEGIEKLVHLKHFHWSSSPYCSNPLS 902
Query: 1381 LILK--FSLLQELCLDHLRERESGITSMEDLLSLRQMENLTVHFPCLSNFIINSQITK-- 1214
L FS L +L L +R +E+L LR++E + V F L NF NS +
Sbjct: 903 NPLSNLFSNLVQLQCLRLDDRRLPDVRVEELSGLRKLEIVEVKFSGLHNF--NSYMRTEH 960
Query: 1213 ---------GLNKFNFMVADPNEW-RDMELKMFSLENSYLYWKRLVSVSNKIHRIPDNSL 1064
GLN F NE+ +++ +K +LE D L
Sbjct: 961 YRRLTHYCVGLNGFGTFRGKKNEFCKEVIVKSCNLEGG--------------KDNDDYQL 1006
Query: 1063 VLPQNTQYLRIQQFNDLTRFSELS-CLKEARDLRECRIIACRKMKYIMSSEDVTEEQGHL 887
VLP N Q+ +I++ + T ++S LK A DL+ C I C+ ++Y+ S ED L
Sbjct: 1007 VLPTNVQFFKIEKCHLPTGLLDVSQSLKMATDLKACLISKCKGIEYLWSVEDCIASLNWL 1066
Query: 886 L---------------------QHVEMLEIEKCPNVRFLFSSKLFKQFQKLEQVRVIDCG 770
++ L + C N++ LF+ +L K L+ ++ ID G
Sbjct: 1067 FLKDLPSLRVLFKLRPIDIVRCSSLKHLYVSYCDNLKHLFTPELVK--YHLKNLQSIDVG 1124
Query: 769 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLPSLQFIHLEKV-RVKRLWS 593
P+LQ + LE + ++K +W
Sbjct: 1125 NCRQMEDLIVAAEVEEEEEEEEEVINQRHNLILY------FPNLQSLTLENLPKLKSIWK 1178
Query: 592 GITVCKSLRKLEVYACHELKTL 527
G C SL +L V+ C EL+ L
Sbjct: 1179 GTMTCDSL-QLTVWNCPELRRL 1199
>ref|XP_002317519.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860584|gb|EEE98131.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 958
Score = 94.4 bits (233), Expect = 8e-17
Identities = 91/383 (23%), Positives = 164/383 (42%), Gaps = 38/383 (9%)
Frame = -2
Query: 1561 LLLSRCKQLKRIPSVAKLQLLEVLRLDLSALTELPEGMEALVNLKILDLWQADLREVPII 1382
L L RC++L+ IPS+AKL+ L L L +AL ELP+GME L NL+ L+L +L+E+P
Sbjct: 540 LYLRRCEKLRHIPSLAKLRELRKLDLRYTALEELPQGMEMLSNLRYLNLHGNNLKELPAG 599
Query: 1381 LILKFSLLQELCLDHLRERESGI---TSMEDLLSLRQMENLTVHFPCLSNF---IINSQI 1220
++ S L+ L ++ RE G +E++ L+ +E L F LS+F + + +
Sbjct: 600 ILPNLSCLKFLSIN----REMGFFKTERVEEMACLKSLETLRYQFCDLSDFKKYLKSPDV 655
Query: 1219 TKGLNKFNFMVADPNEWRDMELKMFSLENSYLYWKRLVSVSNKIHRIPDNSLVLPQNTQY 1040
++ L + F++ M+ ++ Y + L++ N + L LP++
Sbjct: 656 SQPLITYFFLIGQLGVDPTMDYLLYMTPEEVFYKEVLLNNCNIGEK--GRFLELPEDVSA 713
Query: 1039 LRIQQFNDLTRFSELSCLKEARDLRECRIIACRKMKYIMSSEDVTEEQGHLLQ------- 881
L I + +D ++S K A L+ + C +++ ++S + + E L+
Sbjct: 714 LSIGRCHDARSLCDVSPFKHAPSLKSFVMWECDRIECLVSKSESSPEIFERLESLYLKTL 773
Query: 880 ------------------------HVEMLEIEKCPNVRFLFSSKLFKQFQKLEQVRVIDC 773
H++ L I CP+++ LFS L + LE + V DC
Sbjct: 774 KNFFVLITREGSATPPLQSNSTFAHLKSLTIGACPSMKNLFSLDLLPNLKNLEVIEVDDC 833
Query: 772 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLPSLQFIHLEKV-RVKRLW 596
L L+ + L + +K ++
Sbjct: 834 ---------HKMEEIIAIEEEEEGTMVKDSNRSSNRNTVTNLSKLRALKLSNLPELKSIF 884
Query: 595 SGITVCKSLRKLEVYACHELKTL 527
G+ +C SL+++ V C ELK +
Sbjct: 885 QGVVICGSLQEILVVNCPELKRI 907
Score = 93.6 bits (231), Expect = 1e-16
Identities = 121/468 (25%), Positives = 180/468 (38%), Gaps = 12/468 (2%)
Frame = -2
Query: 1510 LQLLEVLRLDLSALTELPEGMEALVNLKILDLWQAD-LREVPIILILKFSLLQELCLDHL 1334
LQ L+VL L +A+ +LP LVNL L L + + LR +P + L+ +L L
Sbjct: 511 LQGLKVLNLSSTAIPKLPGSFSDLVNLTALYLRRCEKLRHIPSLAKLRELRKLDLRYTAL 570
Query: 1333 RERESGITSMEDLLSLRQMENLTVHFPCLSNFIINSQITKGLNKFNFMVADPNEWRDMEL 1154
E G+ + +L L N P + + N K L+ M E +
Sbjct: 571 EELPQGMEMLSNLRYLNLHGNNLKELP--AGILPNLSCLKFLSINREMGFFKTERVEEMA 628
Query: 1153 KMFSLENSYLYWKRLVSVSNKIHRIPDNSLVLPQNTQYLRIQQFN-DLTRFSELSCLKEA 977
+ SLE + L S K + PD S P T + I Q D T L E
Sbjct: 629 CLKSLETLRYQFCDL-SDFKKYLKSPDVSQ--PLITYFFLIGQLGVDPTMDYLLYMTPEE 685
Query: 976 RDLRECRIIACR---KMKYIMSSEDVTEEQGHLLQHVEMLEIEKCPNVRFLFSSKLFKQF 806
+E + C K +++ EDV+ L I +C + R L FK
Sbjct: 686 VFYKEVLLNNCNIGEKGRFLELPEDVSA-----------LSIGRCHDARSLCDVSPFKHA 734
Query: 805 QKLEQVRVIDCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLPSLQFIH 626
L+ + +C P LQ
Sbjct: 735 PSLKSFVMWECDRIECLVSKSESSPEIFERLESLYLKTLKNFFVLITREGSATPPLQ--- 791
Query: 625 LEKVRVKRLWSGITVCKSLRKLEVYACHELKTLFSTKLLQHCPNLEVITVCRCRKMEELL 446
+ L+ L + AC +K LFS LL + NLEVI V C KMEE++
Sbjct: 792 -----------SNSTFAHLKSLTIGACPSMKNLFSLDLLPNLKNLEVIEVDDCHKMEEII 840
Query: 445 TAGED------SGEWNTSNTTSTIRVPRLQILWLKELPKLESIWKGVMACDYXXXXXXXX 284
E+ +SN + + +L+ L L LP+L+SI++GV+ C
Sbjct: 841 AIEEEEEGTMVKDSNRSSNRNTVTNLSKLRALKLSNLPELKSIFQGVVICGSLQEILVVN 900
Query: 283 XXXXKRLPQFSAEHQILPLTLKEIRA-SKEWWDALEWDHPSEKNILQP 143
KR+P F I + L+ I+A KEWW+ +EW + + KN+LQP
Sbjct: 901 CPELKRIPLFDPVLGIGQIPLRRIQAYPKEWWERVEWGNSNSKNVLQP 948
>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like [Vitis
vinifera]
Length = 1016
Score = 92.4 bits (228), Expect = 3e-16
Identities = 57/158 (36%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Frame = -2
Query: 580 CKSLRKLEVYACHELKTLFSTKLLQ-HCPNLEVITVCRCRKMEELLTAGEDSGEWNTSNT 404
C SL+ L V CH LK L + +L++ H NL+ I V C +ME+++ E+ + N N
Sbjct: 832 CSSLKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCSQMEDIIVGVEEE-DINEKNN 890
Query: 403 TSTIRVPRLQILWLKELPKLESIWKGVMACDYXXXXXXXXXXXXKRLP--------QFSA 248
+ P + L L +LPKL+ IWKG M CD KRLP +
Sbjct: 891 P-ILCFPNFRCLELVDLPKLKGIWKGTMTCDSLQHLLVLKCRNLKRLPFAVSVHINDGNG 949
Query: 247 EHQILPLTLKEIRASKEWWDALEWD-HPSEKNILQPFF 137
+ + LK+I KEWWD +EWD HP K++ QP F
Sbjct: 950 QRRASTPPLKQIGGDKEWWDGVEWDTHPHAKSVFQPLF 987
Score = 91.3 bits (225), Expect = 6e-16
Identities = 98/379 (25%), Positives = 158/379 (41%), Gaps = 34/379 (8%)
Frame = -2
Query: 1561 LLLSRCKQLKRIPSVAKLQLLEVLRLDLSALTELPEGMEALVNLKILDLWQADLREV--- 1391
L+L C++LK++ S+AKL+ L L L + + +P G+E LV LK R+
Sbjct: 581 LILCECRELKQVGSLAKLKELRELDLSWNEMETIPNGIEELVLLKHFSWISYHSRQTILP 640
Query: 1390 -PIILILKFSLLQELCLDHLRERESGITSMEDLLSLRQMENLTVHFPCLSNF--IINSQI 1220
P+ +L +LLQ CL H E+ + +E+L LR++E L V+F L NF + +Q
Sbjct: 641 NPLSKLLP-NLLQLQCLRHDGEKFLDV-GVEELSGLRKLEVLDVNFSSLHNFNSYMKTQH 698
Query: 1219 TKGLNKFNFMVADPNEWRDMELKMFSLENSYLYWKRLVSVSNKIHR----IPDNSLVLPQ 1052
+ L + ++ R+ + S N + + K + K+ D LVLP
Sbjct: 699 YRRLTHYRVRLSG----REYSRLLGSQRNRHGFCKEVEVWECKLTEGGKDNDDYQLVLPT 754
Query: 1051 NTQYLRIQQFNDLTRFSELS-CLKEARDLRECRIIACRKMKYIMSSEDVTEEQGHLL--- 884
N Q+L+I ND T ++S LK A DL+ C I C +KY+ ED + L
Sbjct: 755 NVQFLQIYTCNDPTSLLDVSPSLKIATDLKACLISKCEGIKYLWWVEDCIDSLNSLFLDL 814
Query: 883 ------------------QHVEMLEIEKCPNVRFLFSSKLFK-QFQKLEQVRVIDCGXXX 761
++ L + KC N++ L + +L K Q L+ + V C
Sbjct: 815 LPNLRVLFKLKPTDNVRCSSLKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCS--- 871
Query: 760 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITLPSLQFIHL-EKVRVKRLWSGIT 584
+ P+ + + L + ++K +W G
Sbjct: 872 --------------QMEDIIVGVEEEDINEKNNPILCFPNFRCLELVDLPKLKGIWKGTM 917
Query: 583 VCKSLRKLEVYACHELKTL 527
C SL+ L V C LK L
Sbjct: 918 TCDSLQHLLVLKCRNLKRL 936
>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
Length = 984
Score = 87.4 bits (215), Expect = 9e-15
Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Frame = -2
Query: 571 LRKLEVYACHELKTLFSTKLLQ-HCPNLEVITVCRCRKMEELLTAGEDSGEWNTSNTTST 395
L+ L V CH LK L + +L++ H NL+ I V C +ME+++ E+ + N N
Sbjct: 766 LKHLYVSKCHNLKHLLTLELVKNHLQNLQNIYVRSCSQMEDIIVGVEEE-DINEKNNP-I 823
Query: 394 IRVPRLQILWLKELPKLESIWKGVMACDYXXXXXXXXXXXXKRLP--------QFSAEHQ 239
+ P + L L +LPKL+ IWKG M CD KRLP + + +
Sbjct: 824 LCFPNFRCLELVDLPKLKGIWKGTMTCDSLQHLLVLKCRNLKRLPFAVSVHINDGNGQRR 883
Query: 238 ILPLTLKEIRASKEWWDALEWD-HPSEKNILQPFF 137
LK+I KEWWD +EWD HP K++ QP F
Sbjct: 884 ASTPPLKQIGGDKEWWDGVEWDTHPHAKSVFQPLF 918
Score = 80.1 bits (196), Expect = 1e-12
Identities = 89/354 (25%), Positives = 143/354 (40%), Gaps = 9/354 (2%)
Frame = -2
Query: 1561 LLLSRCKQLKRIPSVAKLQLLEVLRLDLSALTELPEGMEALVNLKILDLWQADLREVPII 1382
L+L C++LK++ S+AKL+ L L L + + +P G+E
Sbjct: 581 LILCECRELKQVGSLAKLKELRELDLSWNEMETIPNGIE--------------------- 619
Query: 1381 LILKFSLLQELCLDHLRERESGITSMEDLLSLRQMENLTVHFPCLSNF--IINSQITKGL 1208
ELCL H E+ + +E+L LR++E L V+F L NF + +Q + L
Sbjct: 620 ---------ELCLRHDGEKFLDV-GVEELSGLRKLEVLDVNFSSLHNFNSYMKTQHYRRL 669
Query: 1207 NKFNFMVADPNEWRDMELKMFSLENSYLYWKRLVSVSNKIHR----IPDNSLVLPQNTQY 1040
+ ++ R+ + S N + + K + K+ D LVLP N Q+
Sbjct: 670 THYRVRLSG----REYSRLLGSQRNRHGFCKEVEVWECKLTEGGKDNDDYQLVLPTNVQF 725
Query: 1039 LRIQQFNDLTRFSELS-CLKEARDLRECRIIACRKMKYIMSSEDVTEEQGHLLQHVEMLE 863
L+I ND T ++S LK A DL+ C I C +KY+ L+H L
Sbjct: 726 LQIYTCNDPTSLLDVSPSLKIATDLKACLISKCEGIKYL------------CLKH---LY 770
Query: 862 IEKCPNVRFLFSSKLFK-QFQKLEQVRVIDCGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 686
+ KC N++ L + +L K Q L+ + V C
Sbjct: 771 VSKCHNLKHLLTLELVKNHLQNLQNIYVRSCS-----------------QMEDIIVGVEE 813
Query: 685 XXXXXXXXXXITLPSLQFIHL-EKVRVKRLWSGITVCKSLRKLEVYACHELKTL 527
+ P+ + + L + ++K +W G C SL+ L V C LK L
Sbjct: 814 EDINEKNNPILCFPNFRCLELVDLPKLKGIWKGTMTCDSLQHLLVLKCRNLKRL 867