BLASTX nr result

ID: Coptis23_contig00003022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003022
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphata...   180   3e-43
emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]   180   4e-43
gb|AAG49895.1| PnFL-1 [Ipomoea nil]                                   142   1e-31
ref|XP_002454529.1| hypothetical protein SORBIDRAFT_04g032700 [S...   124   3e-26
ref|XP_002979958.1| hypothetical protein SELMODRAFT_111947 [Sela...   122   8e-26

>ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphatase [Vitis vinifera]
          Length = 214

 Score =  180 bits (457), Expect = 3e-43
 Identities = 97/188 (51%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
 Frame = +2

Query: 242 SLHIHQICQPIPRSLLKFLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           SLH+H + QP+PRSLLK LE++GDGRF+FP+ ++                          
Sbjct: 33  SLHLHTLFQPVPRSLLKTLELAGDGRFFFPVAVSLLSSSSLRPILIPLLIGLLLDLLLVG 92

Query: 422 XXXXXXSIKFLVKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVESL 601
                  IK++V+RPRPVYNKGMHLTVA+DHWSFPSGHSSRV F ++FLYLS+  I E++
Sbjct: 93  V------IKYIVRRPRPVYNKGMHLTVAVDHWSFPSGHSSRVVFAAAFLYLSTALIGEAV 146

Query: 602 VHFGFK----GSNWIGSDGILIVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVEAQ 769
                     GS+  G     IV +V LWS ATS+SRVLLGRHFVFDV+AGACLG++EA 
Sbjct: 147 AQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLLGRHFVFDVVAGACLGVLEAL 206

Query: 770 LVFRFYFY 793
            VF F  Y
Sbjct: 207 FVFHFLRY 214


>emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]
          Length = 288

 Score =  180 bits (456), Expect = 4e-43
 Identities = 108/256 (42%), Positives = 142/256 (55%), Gaps = 4/256 (1%)
 Frame = +2

Query: 38  HDFKVIRLFASHGPTPLLQI*PFSNRTQKIPRPKLMEEKEATKKNHTTTIPKPNNXXXXX 217
           H    I ++ S+G TP  +        +   +P  M+  ++     T T P P+      
Sbjct: 46  HAKSPILVWISNGRTPSKE------GKKATDQPAPMDRDQSPVATXTPTTP-PSPTLLRR 98

Query: 218 XXXXXXXWSLHIHQICQPIPRSLLKFLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXX 397
                   SLH+H + QP+PRSLLK LE++GDGRF+FP+ ++                  
Sbjct: 99  LINLDTTLSLHLHTLFQPVPRSLLKTLELAGDGRFFFPVAVSLLSSSSLRPILIPLLIGL 158

Query: 398 XXXXXXXXXXXXXXSIKFLVKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLS 577
                          IK++V+RPRP YNKGMHLTVA+DHWSFPSGHSSRV F ++FLYLS
Sbjct: 159 LLDLLLVGV------IKYIVRRPRPXYNKGMHLTVAVDHWSFPSGHSSRVVFAAAFLYLS 212

Query: 578 SESIVESLVHFGFK----GSNWIGSDGILIVYLVGLWSVATSMSRVLLGRHFVFDVIAGA 745
           +  I E++          GS+  G     IV +V LWS ATS+SRVLLGRHFVFDV+AGA
Sbjct: 213 TALIGEAVAQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLLGRHFVFDVVAGA 272

Query: 746 CLGLVEAQLVFRFYFY 793
           CLG++EA  VF F  Y
Sbjct: 273 CLGVLEALFVFHFLRY 288


>gb|AAG49895.1| PnFL-1 [Ipomoea nil]
          Length = 209

 Score =  142 bits (357), Expect = 1e-31
 Identities = 80/185 (43%), Positives = 109/185 (58%), Gaps = 1/185 (0%)
 Frame = +2

Query: 242 SLHIHQICQPI-PRSLLKFLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXX 418
           SL ++ +  PI P S+LK LEISGDGR +FP+ I+                         
Sbjct: 28  SLRLYTLTHPILPYSVLKTLEISGDGRLFFPVIISILLATSAAAAFLVDLLLGAVLDLAV 87

Query: 419 XXXXXXXSIKFLVKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVES 598
                   +K L++RPRPVYNK M L+ A+DHWSFPSGHSSRV FI++  YLS + +   
Sbjct: 88  IGI-----LKHLIQRPRPVYNKNMFLSFAVDHWSFPSGHSSRVFFIATMFYLSFDLVQGF 142

Query: 599 LVHFGFKGSNWIGSDGILIVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVEAQLVF 778
           L+   +     + +D    VY++G W+  TS+SR+LLGRHFV DV+AGACLG++E    F
Sbjct: 143 LLDLRYD----LFADH--FVYIIGAWATITSVSRILLGRHFVLDVVAGACLGVLEGLFSF 196

Query: 779 RFYFY 793
           RF+ Y
Sbjct: 197 RFFNY 201


>ref|XP_002454529.1| hypothetical protein SORBIDRAFT_04g032700 [Sorghum bicolor]
           gi|241934360|gb|EES07505.1| hypothetical protein
           SORBIDRAFT_04g032700 [Sorghum bicolor]
          Length = 197

 Score =  124 bits (311), Expect = 3e-26
 Identities = 73/178 (41%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
 Frame = +2

Query: 242 SLHIHQICQPIPRSLLKFLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           SL +H +  P+PR LLK LE++GDGR W P+PI+                          
Sbjct: 29  SLRLHALFGPVPRLLLKALEVAGDGRIWLPVPISLLLLSASPANPILAGLVAGLVLDLIL 88

Query: 422 XXXXXXSIKFLVKRPRPVYN-KGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVES 598
                  +K +V+RPRP YN K M++ VA DHWSFPSGHSSR   ++SFL  +     E+
Sbjct: 89  VGL----VKVVVRRPRPDYNAKDMYVAVAADHWSFPSGHSSRAFLVASFLAAAGFRPREA 144

Query: 599 LVHFGFKGSNWIGSDGILIVYLVGLWSVATSMSRVLLGRHFVFDVIAGACLGLVEAQL 772
           L                       LW+ ATS SRVLLGRH+V DV+AGACLG+ EA L
Sbjct: 145 LF----------------------LWATATSASRVLLGRHYVLDVVAGACLGVFEAWL 180


>ref|XP_002979958.1| hypothetical protein SELMODRAFT_111947 [Selaginella moellendorffii]
           gi|300152185|gb|EFJ18828.1| hypothetical protein
           SELMODRAFT_111947 [Selaginella moellendorffii]
          Length = 212

 Score =  122 bits (307), Expect = 8e-26
 Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
 Frame = +2

Query: 242 SLHIHQICQPIPRSLLKFLEISGDGRFWFPIPIAXXXXXXXXXXXXXXXXXXXXXXXXXX 421
           SL IHQ    IPR +L+ LE SGDG FW  + IA                          
Sbjct: 12  SLWIHQAGARIPRFVLRVLEFSGDGVFWI-VAIAALAFAAPSSPQLQLLVPDLMLGFVLD 70

Query: 422 XXXXXXSIKFLVKRPRPVYNKGMHLTVALDHWSFPSGHSSRVCFISSFLYLSSESIVESL 601
                 SIK +V+RPRP+YNKGM++  ++DHWSFPSGHSSR  F+++F +L + S + S 
Sbjct: 71  VLLVA-SIKTIVRRPRPIYNKGMYVISSVDHWSFPSGHSSRALFMATFFWLKAASSISSS 129

Query: 602 VHFGFKGSNWIGSDGILIVYLVGL-WSVATSMSRVLLGRHFVFDVIAGACLGLVEAQLVF 778
                        + ++ V  + L W+VAT++SRVLLGRH+V DV  G+ LG++EA +V 
Sbjct: 130 SSLPPSPPRASLLEFVVTVEFLALSWAVATAISRVLLGRHYVMDVFVGSSLGVLEAAVVD 189

Query: 779 RF 784
           +F
Sbjct: 190 KF 191


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