BLASTX nr result
ID: Coptis23_contig00003018
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00003018
(2046 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283101.1| PREDICTED: origin recognition complex subuni... 653 0.0
emb|CBI15609.3| unnamed protein product [Vitis vinifera] 640 0.0
ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|2... 616 e-174
ref|XP_003551665.1| PREDICTED: origin recognition complex subuni... 607 e-171
ref|XP_003623975.1| Origin recognition complex 5 subunit [Medica... 602 e-169
>ref|XP_002283101.1| PREDICTED: origin recognition complex subunit 5-like [Vitis vinifera]
Length = 541
Score = 653 bits (1684), Expect = 0.0
Identities = 332/538 (61%), Positives = 415/538 (77%), Gaps = 3/538 (0%)
Frame = -3
Query: 2008 KEESPQVTKRTTRSSASNTPTKISVQNQKKVDPRPSSVLDDLVCGEQSISQETLLSTFPG 1829
K+ESPQ+T+RTTRSS+S K + K +P P ++ +DLV G + I + LLS+FPG
Sbjct: 4 KDESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTI-NDLVFGGEPIKLDELLSSFPG 62
Query: 1828 RGVQIXXXXXXXXXXXXXXXXXXLYGGPSSGKTSVVLQIFKHLKRPFIYSSFRTCYNPRL 1649
R +QI LYGG S+GKTS++LQIF+HL RPF+YSS TCY+PR+
Sbjct: 63 RRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSPRI 122
Query: 1648 LFESILNQLLHHRKNSSNGYSSAKRCEKPADFVNMVGEALKEVINSLRVNSEKMA-KESV 1472
LFESI+NQLL HRKN+ NGY+SAKRCE+P+DFV + EAL V+N+L+ NS K + ++
Sbjct: 123 LFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREALTNVLNTLKENSGKSSSRKPA 182
Query: 1471 QQGCGRMIYLIFDNMGLVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLST 1292
Q GRMIYLIFDN+ LVR+WDK+S ++ LF+L+DIL MPEVGLIFIS SPD Y+
Sbjct: 183 GQANGRMIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSDR 242
Query: 1291 GSLEPIPIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKPL 1112
G +EPIPI FPDYTED L QIF+RNQ +PKLYSSFLDVVL+ +ITR +DELS F PL
Sbjct: 243 GYVEPIPILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSPL 302
Query: 1111 YEKYCEPLSDSGRVPNQNMKSKLYIHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKKR 932
++KYCEPLSD G VPN++MK KL+ HL+PH+ P+LNE+FKV S +PE++A +EK+++K
Sbjct: 303 FKKYCEPLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRKS 362
Query: 931 NTRVLGDGEAHEDLDIHMSVSAKYLLISAFLASRNPATLDAALFDSAGGGDNRKRRRKTS 752
N LG EA +++D HMS SAKYL+ISAFLASRNPATLDA+LFDS GG DNRKR+RK+S
Sbjct: 363 NANKLGGREAFDEIDFHMSTSAKYLIISAFLASRNPATLDASLFDSTGGSDNRKRKRKSS 422
Query: 751 ETSAQQKENAEQELLMKGPGTFPLERLLAIFQCITSVTEDYAEEESQEVDAI--ESGDIG 578
E S +QKE AEQELLMKGPGTFPLERLLAIFQC+TSV E E+ Q + + +GD G
Sbjct: 423 EKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDSG 482
Query: 577 LMSDVLLQLSTLCNANIIIKGGNCPLETSSRYRSTVSEEMALKVARSVNFPLPKYLYR 404
LMSDVLLQLS+LCNAN I KGG+CPLE S+RYR+T+SE++ALKVARS+ FPL KYLYR
Sbjct: 483 LMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYR 540
>emb|CBI15609.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 640 bits (1651), Expect = 0.0
Identities = 329/539 (61%), Positives = 405/539 (75%), Gaps = 2/539 (0%)
Frame = -3
Query: 2014 MGKEESPQVTKRTTRSSASNTPTKISVQNQKKVDPRPSSVLDDLVCGEQSISQETLLSTF 1835
MGKEESPQ+T+RTTRSS+S K + K +P P ++ +DLV G + I + LLS+F
Sbjct: 1 MGKEESPQITRRTTRSSSSTPILKNGEETTKTSEPHPLTI-NDLVFGGEPIKLDELLSSF 59
Query: 1834 PGRGVQIXXXXXXXXXXXXXXXXXXLYGGPSSGKTSVVLQIFKHLKRPFIYSSFRTCYNP 1655
PGR +QI LYGG S+GKTS++LQIF+HL RPF+YSS TCY+P
Sbjct: 60 PGRRIQILELMRLLGPLNSPMLPLFLYGGTSTGKTSIILQIFRHLNRPFVYSSCLTCYSP 119
Query: 1654 RLLFESILNQLLHHRKNSSNGYSSAKRCEKPADFVNMVGEALKEVINSLRVNSEKMAKES 1475
R+LFESI+NQLL HRKN+ NGY+SAKRCE+P+DFV + EAL
Sbjct: 120 RILFESIMNQLLLHRKNADNGYASAKRCERPSDFVVSLREALTNPAG------------- 166
Query: 1474 VQQGCGRMIYLIFDNMGLVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLS 1295
Q GRMIYLIFDN+ LVR+WDK+S ++ LF+L+DIL MPEVGLIFIS SPD Y+
Sbjct: 167 --QANGRMIYLIFDNLELVREWDKSSSILPFLFELYDILNMPEVGLIFISKVSPDAYYSD 224
Query: 1294 TGSLEPIPIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKP 1115
G +EPIPI FPDYTED L QIF+RNQ +PKLYSSFLDVVL+ +ITR +DELS F P
Sbjct: 225 RGYVEPIPILFPDYTEDSLRQIFMRNQANPKLYSSFLDVVLRTFSRITRRVDELSTAFSP 284
Query: 1114 LYEKYCEPLSDSGRVPNQNMKSKLYIHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKK 935
L++KYCEPLSD G VPN++MK KL+ HL+PH+ P+LNE+FKV S +PE++A +EK+++K
Sbjct: 285 LFKKYCEPLSDPGLVPNEDMKRKLFSHLQPHLAPALNEIFKVQSQPSPEVEAKQEKVKRK 344
Query: 934 RNTRVLGDGEAHEDLDIHMSVSAKYLLISAFLASRNPATLDAALFDSAGGGDNRKRRRKT 755
N LG EA +++D HMS SAKYL+ISAFLASRNPATLDA+LFDS GG DNRKR+RK+
Sbjct: 345 SNANKLGGREAFDEIDFHMSTSAKYLIISAFLASRNPATLDASLFDSTGGSDNRKRKRKS 404
Query: 754 SETSAQQKENAEQELLMKGPGTFPLERLLAIFQCITSVTEDYAEEESQEVDAI--ESGDI 581
SE S +QKE AEQELLMKGPGTFPLERLLAIFQC+TSV E E+ Q + + +GD
Sbjct: 405 SEKSMEQKETAEQELLMKGPGTFPLERLLAIFQCLTSVVESSLGEDQQINEGLGAGNGDS 464
Query: 580 GLMSDVLLQLSTLCNANIIIKGGNCPLETSSRYRSTVSEEMALKVARSVNFPLPKYLYR 404
GLMSDVLLQLS+LCNAN I KGG+CPLE S+RYR+T+SE++ALKVARS+ FPL KYLYR
Sbjct: 465 GLMSDVLLQLSSLCNANFISKGGSCPLEGSTRYRATISEDLALKVARSLKFPLSKYLYR 523
>ref|XP_002320803.1| predicted protein [Populus trichocarpa] gi|222861576|gb|EEE99118.1|
predicted protein [Populus trichocarpa]
Length = 536
Score = 616 bits (1589), Expect = e-174
Identities = 317/538 (58%), Positives = 393/538 (73%)
Frame = -3
Query: 2014 MGKEESPQVTKRTTRSSASNTPTKISVQNQKKVDPRPSSVLDDLVCGEQSISQETLLSTF 1835
MGKEESPQ+T+R TR S+S T V+ +K P + L+D V G + +S LLS+F
Sbjct: 1 MGKEESPQITRRVTRLSSSTAVTSNEVETEKITKPYKPT-LNDFVFGGEQLSFNDLLSSF 59
Query: 1834 PGRGVQIXXXXXXXXXXXXXXXXXXLYGGPSSGKTSVVLQIFKHLKRPFIYSSFRTCYNP 1655
P RG QI +YG PS+GKTS +LQIF++L RPF+Y+S RTCY+
Sbjct: 60 PARGNQIRELLRLLGPVNSPMLPLFVYGDPSTGKTSTILQIFRYLNRPFVYASCRTCYSL 119
Query: 1654 RLLFESILNQLLHHRKNSSNGYSSAKRCEKPADFVNMVGEALKEVINSLRVNSEKMAKES 1475
++LFES+LNQLL H+KNS+NGYSS KRC KP+DFVN V E L VI LR + + +S
Sbjct: 120 QILFESVLNQLLLHKKNSANGYSSTKRCIKPSDFVNFVREDLTSVIEKLRSLKKLGSNKS 179
Query: 1474 VQQGCGRMIYLIFDNMGLVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLS 1295
+ G M+YLIFDN+ L+R+WDK+S + +F L+D+LKM EVGLIFISN+SPDTY+ +
Sbjct: 180 AGKPNGNMLYLIFDNLELIREWDKSSSALPFMFNLYDVLKMHEVGLIFISNTSPDTYYSN 239
Query: 1294 TGSLEPIPIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKP 1115
G E +P++FP+YTED+L QI +RNQ + KLYSSFLDVVL+ C+ TR +DELS F P
Sbjct: 240 MGYTEHVPVYFPEYTEDDLRQILMRNQANRKLYSSFLDVVLRPFCRTTRRVDELSTAFSP 299
Query: 1114 LYEKYCEPLSDSGRVPNQNMKSKLYIHLKPHVTPSLNEVFKVPSCLAPELKANKEKLRKK 935
L+ KYCEPLSD VPN+ MK +L+ H +PH+ PSLNE+F VPS + E + NK+ R+K
Sbjct: 300 LFRKYCEPLSDLASVPNEEMKRRLFSHFQPHIAPSLNEIFWVPSKSSTEAEINKD-TRQK 358
Query: 934 RNTRVLGDGEAHEDLDIHMSVSAKYLLISAFLASRNPATLDAALFDSAGGGDNRKRRRKT 755
+TR + +D HMS SAKYLLISAFLASRNPATLDA+LFDS GG D+RKR+RK
Sbjct: 359 GSTRKSEVSDHFAQIDFHMSTSAKYLLISAFLASRNPATLDASLFDSTGGSDSRKRKRKA 418
Query: 754 SETSAQQKENAEQELLMKGPGTFPLERLLAIFQCITSVTEDYAEEESQEVDAIESGDIGL 575
SE S +QKE AEQELLMKGPGTFPLERLLAIFQCITS + EEE + GD GL
Sbjct: 419 SEKSMEQKEVAEQELLMKGPGTFPLERLLAIFQCITSAADSLDEEEHENDVLRVGGDCGL 478
Query: 574 MSDVLLQLSTLCNANIIIKGGNCPLETSSRYRSTVSEEMALKVARSVNFPLPKYLYRR 401
MSDVLLQLS+LCNAN IIKGG+CPLE S+RYRSTVSE++ALKVARS+ FPLP YLYRR
Sbjct: 479 MSDVLLQLSSLCNANFIIKGGSCPLEGSTRYRSTVSEDLALKVARSLKFPLPNYLYRR 536
>ref|XP_003551665.1| PREDICTED: origin recognition complex subunit 5-like [Glycine max]
Length = 541
Score = 607 bits (1564), Expect = e-171
Identities = 311/541 (57%), Positives = 396/541 (73%), Gaps = 4/541 (0%)
Frame = -3
Query: 2014 MGKEESPQVTKRTTRSSASNTPTKISVQNQKKVDPRPSSVLDDLVCGEQSISQETLLSTF 1835
MG++++ Q+ +R TRSSAS++ + + KV ++DL+ G IS ++S+F
Sbjct: 1 MGEDKTTQLPRRMTRSSASSSASTSNNVAAAKVTCLEPLTINDLLVGGDPISLNDIISSF 60
Query: 1834 PGRGVQIXXXXXXXXXXXXXXXXXXLYGGPSSGKTSVVLQIFKHLKRPFIYSSFRTCYNP 1655
PGR QI +YG S+GKTS++LQ+F+HL RP +YSS RTCYN
Sbjct: 61 PGRSSQILEVVRHLGPLNSPILPLFVYGSSSTGKTSIILQLFRHLNRPIVYSSCRTCYNQ 120
Query: 1654 RLLFESILNQLLHHRKNSSNGYSSAKRCEKPADFVNMVGEALKEVINSLRVNSEKMAKES 1475
+LFESILNQLL HRKN++NGYS+AKRCE+P+DFVN + EAL VIN+L+ + + ++ E
Sbjct: 121 NILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTNVINNLKKSEKLISNEM 180
Query: 1474 VQQGCGRMIYLIFDNMGLVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTYHLS 1295
Q G MIYL+FDN LVR+WDK+S ++ LLF L+D+L MPEVGLIFIS++SPDT++ +
Sbjct: 181 TQGKIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLNMPEVGLIFISSTSPDTFYSN 240
Query: 1294 TGSLEPIPIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIYFKP 1115
G +EPIPI+FPDYTE+++ QI LRNQ + KLYSSFLDV LK C IT+ ID LS KP
Sbjct: 241 MGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLDVSLKSFCGITKQIDHLSAALKP 300
Query: 1114 LYEKYCEPLSDSGR--VPNQNMKSKLYIHLKPHVTPSLNEVFKVPSCLAPELKANKEKLR 941
LYEKYCEPLSD G+ PNQ MK +L H+ PH+ SLNE+FKV S + E++ KE+ R
Sbjct: 301 LYEKYCEPLSDKGKGVAPNQEMKRRLLAHINPHIASSLNEIFKVSSLSSTEVEIRKEEKR 360
Query: 940 KKRNTRVLGDGEAHEDLDIHMSVSAKYLLISAFLASRNPATLDAALFDSAGGGDNRKRRR 761
K N R L E LD H+S SAKYLLISAFLASRNPATLDA+LFDS GG DNRKR+R
Sbjct: 361 KGNNRR-LEQSEELGSLDFHVSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKR 419
Query: 760 KTSETSAQQKENAEQELLMKGPGTFPLERLLAIFQCITSVTEDYAEEESQEVD--AIESG 587
K SE + ++KE EQELLMKGPGTFPLERLLAIFQC+ SV E+ ++E+ Q D +E G
Sbjct: 420 KPSEKAQERKETLEQELLMKGPGTFPLERLLAIFQCLVSVAEEPSDEQEQNNDGLGVEGG 479
Query: 586 DIGLMSDVLLQLSTLCNANIIIKGGNCPLETSSRYRSTVSEEMALKVARSVNFPLPKYLY 407
+ GLMSDVLLQLS+LCNAN I KG +CP+E S RYR+T+SE++ALKVARS+ FPL KYLY
Sbjct: 480 NGGLMSDVLLQLSSLCNANFIFKGRSCPIEGSMRYRTTISEDLALKVARSLKFPLSKYLY 539
Query: 406 R 404
R
Sbjct: 540 R 540
>ref|XP_003623975.1| Origin recognition complex 5 subunit [Medicago truncatula]
gi|355498990|gb|AES80193.1| Origin recognition complex 5
subunit [Medicago truncatula]
Length = 542
Score = 602 bits (1551), Expect = e-169
Identities = 314/544 (57%), Positives = 405/544 (74%), Gaps = 7/544 (1%)
Frame = -3
Query: 2014 MGKEESPQVTKRTTRSSASNTPTKISVQNQKKVDPRPSSV-LDDLVCGEQSISQETLLST 1838
M KEESPQ+ +RTTRS + TP+ ++ KV+ S+ ++DL+ G +S + ++S+
Sbjct: 1 MDKEESPQIPRRTTRSLS--TPSTSNIVPAAKVNSSLESLTINDLLVGGDPVSLDDIISS 58
Query: 1837 FPGRGVQIXXXXXXXXXXXXXXXXXXLYGGPSSGKTSVVLQIFKHLKRPFIYSSFRTCYN 1658
FPGR QI +YGG S+GKTS++LQ+F+HL RP +YSS RTCYN
Sbjct: 59 FPGRSSQIHEIVRLLGPLNSPLLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYN 118
Query: 1657 PRLLFESILNQLLHHRKNSSNGYSSAKRCEKPADFVNMVGEALKEVINSLRVNSEKM-AK 1481
R+LFES+LNQLL H KN++N Y++AKRCE+P+DFVN + EAL VIN+L+ SEKM +K
Sbjct: 119 QRILFESVLNQLLLHSKNAANCYANAKRCERPSDFVNFLREALTGVINNLKEKSEKMISK 178
Query: 1480 ESVQQG-CGRMIYLIFDNMGLVRDWDKNSIMISLLFKLHDILKMPEVGLIFISNSSPDTY 1304
+ V G G MIYL+FDN LVRDWDK+S ++ LLF L+D+LKM EVGLIFIS++SPDT+
Sbjct: 179 KKVHDGKTGNMIYLVFDNFHLVRDWDKSSTILPLLFNLYDMLKMLEVGLIFISSTSPDTF 238
Query: 1303 HLSTGSLEPIPIHFPDYTEDELCQIFLRNQPDPKLYSSFLDVVLKDSCKITRCIDELSIY 1124
+ + G +EPIPI+FPDYTE ++ QI LRNQ + KLYSSFLDV LK C+ITR + ELS
Sbjct: 239 YTNMGYVEPIPIYFPDYTEGDIRQILLRNQANQKLYSSFLDVALKPFCRITRQVGELSTA 298
Query: 1123 FKPLYEKYCEPLSDSGR--VPNQNMKSKLYIHLKPHVTPSLNEVFKVPSCLAPELKANKE 950
KPL+EKYCEPLSD G+ VP+++MK +L+ H+KPH+ SLN+VFKV S + E++ K+
Sbjct: 299 LKPLFEKYCEPLSDKGKGVVPSEDMKRRLFNHIKPHIASSLNDVFKVSSAPSSEVETGKQ 358
Query: 949 KLRKKRNTRVLGDGEAHEDLDIHMSVSAKYLLISAFLASRNPATLDAALFDSAGGGDNRK 770
+ + N + E DLD HMS SAKYLLISAFLASRNPATLDA+LFDS GG DNRK
Sbjct: 359 -TKHQGNPKRSERSEEIGDLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRK 417
Query: 769 RRRKTSETSAQQKENAEQELLMKGPGTFPLERLLAIFQCITSVTEDYAEEESQEVDAI-- 596
R+RK SE + ++KE E+ELLMKGPGTFPLERL+AIFQCI SV ED A+E+ Q+ + +
Sbjct: 418 RKRKASEKALEKKEMLEEELLMKGPGTFPLERLIAIFQCIVSVAEDPADEDEQKNEELGA 477
Query: 595 ESGDIGLMSDVLLQLSTLCNANIIIKGGNCPLETSSRYRSTVSEEMALKVARSVNFPLPK 416
+ G LMSDVLLQLSTLCNAN I KG +CP+E S+RYRST+SE++ LKVARS+ FPL K
Sbjct: 478 QCGSGSLMSDVLLQLSTLCNANFIFKGKSCPIEGSTRYRSTISEDLVLKVARSLKFPLSK 537
Query: 415 YLYR 404
YLYR
Sbjct: 538 YLYR 541