BLASTX nr result

ID: Coptis23_contig00003010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00003010
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246...   334   2e-89
ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana] ...   328   1e-87
gb|ADP88925.1| classical AGP [Gunnera manicata]                       326   5e-87
ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arab...   323   3e-86
ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycin...   321   1e-85

>ref|XP_003631369.1| PREDICTED: uncharacterized protein LOC100246511 [Vitis vinifera]
           gi|296085576|emb|CBI29308.3| unnamed protein product
           [Vitis vinifera]
          Length = 202

 Score =  334 bits (856), Expect = 2e-89
 Identities = 166/207 (80%), Positives = 184/207 (88%), Gaps = 3/207 (1%)
 Frame = +2

Query: 71  MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHAGHIKAKGTIYLSNIRMVFV 250
           MA+NPQL  PNGMPV F++E+ VLARDGVEF++DKIPG H G+ KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFMNEISVLARDGVEFEVDKIPGAHGGNFKAKGTIYLSNIRMVFV 59

Query: 251 ASKPVGNFAAFDIPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 430
           A+KPVGN  AFD+PLLYVH EKFNQPIF+CNN+SGLVEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPVGNITAFDMPLLYVHGEKFNQPIFFCNNVSGLVEPVVPENQHRALYSTHSFKILFK 119

Query: 431 EGGCGTFVPLFFNLITSVRQYSQAA---PEAVSHVDPLQASQTPVDEMMRHAYVDPNDPT 601
           EGGCGTFVPLFFNLITSVR+Y++ A   PE    VDPLQA+QTPVDEMMRHAYVDPNDPT
Sbjct: 120 EGGCGTFVPLFFNLITSVRRYNELAGSGPEL--QVDPLQAAQTPVDEMMRHAYVDPNDPT 177

Query: 602 RIFLQQPIPESQLRRRSYQPHSVEESL 682
           RIFLQQP PESQLRRR+Y  H VE+S+
Sbjct: 178 RIFLQQPTPESQLRRRTY--HPVEDSI 202


>ref|NP_196729.1| uncharacterized protein [Arabidopsis thaliana]
           gi|7573382|emb|CAB87686.1| putative protein [Arabidopsis
           thaliana] gi|17065570|gb|AAL32939.1| putative protein
           [Arabidopsis thaliana] gi|17380652|gb|AAL36156.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148563|gb|AAM10172.1| putative protein [Arabidopsis
           thaliana] gi|21436275|gb|AAM51276.1| unknown protein
           [Arabidopsis thaliana] gi|21593584|gb|AAM65551.1|
           unknown [Arabidopsis thaliana]
           gi|332004326|gb|AED91709.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 207

 Score =  328 bits (840), Expect = 1e-87
 Identities = 162/207 (78%), Positives = 180/207 (86%), Gaps = 6/207 (2%)
 Frame = +2

Query: 71  MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHAGHIKAKGTIYLSNIRMVFV 250
           MA+NPQLL PNGMPV FV+EMFVL RDGVEF++DKIPG H GH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 251 ASKPVGNFAAFDIPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 430
           +SKPV NF AFD+PLLY+H EKFNQPIF+CNNI+G VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  SSKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 431 EGGCGTFVPLFFNLITSVRQYS---QAAPEAVS---HVDPLQASQTPVDEMMRHAYVDPN 592
           EGGCGTFVPLF NLI+SVRQY+   Q A EA +   HVDPLQA+QTPVDEMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVDPLQAAQTPVDEMMRHAYVDPN 179

Query: 593 DPTRIFLQQPIPESQLRRRSYQPHSVE 673
           DPTRI+LQQP  ESQLRRR+Y   + E
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>gb|ADP88925.1| classical AGP [Gunnera manicata]
          Length = 201

 Score =  326 bits (835), Expect = 5e-87
 Identities = 162/201 (80%), Positives = 176/201 (87%)
 Frame = +2

Query: 71  MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHAGHIKAKGTIYLSNIRMVFV 250
           MA+NPQL  PNGMPV F +E+ VLARDGVEF++DKIPG+  G +KAKGTIYLSNIRMVFV
Sbjct: 1   MALNPQLF-PNGMPVPFTNEVSVLARDGVEFEVDKIPGSQGGSVKAKGTIYLSNIRMVFV 59

Query: 251 ASKPVGNFAAFDIPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 430
           A+KP GNF AFD+PLLYV  EKFNQPIF CNNISG VEPVVPE QHRALYSTHSFKILFK
Sbjct: 60  ANKPHGNFTAFDMPLLYVRGEKFNQPIFLCNNISGQVEPVVPENQHRALYSTHSFKILFK 119

Query: 431 EGGCGTFVPLFFNLITSVRQYSQAAPEAVSHVDPLQASQTPVDEMMRHAYVDPNDPTRIF 610
           EGGCGTFVPLFFNLITSVRQY+Q +   V +VDPLQA+QTPVDEMMRHAYVDPNDPTRIF
Sbjct: 120 EGGCGTFVPLFFNLITSVRQYNQLSVPVV-NVDPLQAAQTPVDEMMRHAYVDPNDPTRIF 178

Query: 611 LQQPIPESQLRRRSYQPHSVE 673
           LQQP P S+LRRRSYQ   VE
Sbjct: 179 LQQPTPGSELRRRSYQSRPVE 199


>ref|XP_002871487.1| hypothetical protein ARALYDRAFT_909134 [Arabidopsis lyrata subsp.
           lyrata] gi|297317324|gb|EFH47746.1| hypothetical protein
           ARALYDRAFT_909134 [Arabidopsis lyrata subsp. lyrata]
          Length = 207

 Score =  323 bits (829), Expect = 3e-86
 Identities = 160/207 (77%), Positives = 179/207 (86%), Gaps = 6/207 (2%)
 Frame = +2

Query: 71  MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIPGTHAGHIKAKGTIYLSNIRMVFV 250
           MA+NPQLL PNG+P+ FV+EMFVL RDGVEF++DKIPG H GH+KAKG IYLSNIRMVFV
Sbjct: 1   MALNPQLL-PNGIPIPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFV 59

Query: 251 ASKPVGNFAAFDIPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKILFK 430
           ASKPV NF AFD+PLLY+H EKFNQPIF+CNNISG VEPVVPE +HRALYSTHSFKILFK
Sbjct: 60  ASKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNISGQVEPVVPENEHRALYSTHSFKILFK 119

Query: 431 EGGCGTFVPLFFNLITSVRQYS---QAAPEAVS---HVDPLQASQTPVDEMMRHAYVDPN 592
           EGGCGTFVPLF NLI+SVRQY+   Q A EA +    VDPLQA+QTPV+EMMRHAYVDPN
Sbjct: 120 EGGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPRVDPLQAAQTPVEEMMRHAYVDPN 179

Query: 593 DPTRIFLQQPIPESQLRRRSYQPHSVE 673
           DPTRI+LQQP  ESQLRRR+Y   + E
Sbjct: 180 DPTRIYLQQPSGESQLRRRAYHSGAAE 206


>ref|NP_001237530.1| uncharacterized protein LOC100500660 [Glycine max]
           gi|255630875|gb|ACU15800.1| unknown [Glycine max]
          Length = 206

 Score =  321 bits (823), Expect = 1e-85
 Identities = 156/202 (77%), Positives = 177/202 (87%), Gaps = 3/202 (1%)
 Frame = +2

Query: 71  MAVNPQLLSPNGMPVAFVSEMFVLARDGVEFQIDKIP--GTHAGHIKAKGTIYLSNIRMV 244
           MA+NPQL  PNGMPV FV+EMFVLARDGVEF++DKIP  G H G++K KG +YLSNIRMV
Sbjct: 1   MALNPQLF-PNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGNLKTKGIVYLSNIRMV 59

Query: 245 FVASKPVGNFAAFDIPLLYVHDEKFNQPIFYCNNISGLVEPVVPEGQHRALYSTHSFKIL 424
           FVA  PVG+F AFD+PLLY+H EKFNQPIF+CNN+SG VEPVVP  QHRALYSTHSFKIL
Sbjct: 60  FVAKSPVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKIL 119

Query: 425 FKEGGCGTFVPLFFNLITSVRQYSQ-AAPEAVSHVDPLQASQTPVDEMMRHAYVDPNDPT 601
           FKEGGCGTF+PLFFNLITSVRQY+Q    +  ++VDPLQASQTPVDEMMRHAYVDPNDPT
Sbjct: 120 FKEGGCGTFIPLFFNLITSVRQYNQHTNMQTQNYVDPLQASQTPVDEMMRHAYVDPNDPT 179

Query: 602 RIFLQQPIPESQLRRRSYQPHS 667
           +IFLQQP  +SQLRRR+YQP +
Sbjct: 180 KIFLQQPNSDSQLRRRTYQPQA 201


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