BLASTX nr result

ID: Coptis23_contig00002990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002990
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34003.3| unnamed protein product [Vitis vinifera]              365   1e-98
ref|XP_002263870.2| PREDICTED: carbonic anhydrase 2, chloroplast...   364   2e-98
ref|XP_002522651.1| carbonic anhydrase, putative [Ricinus commun...   358   1e-96
emb|CBI19256.3| unnamed protein product [Vitis vinifera]              348   1e-93
ref|XP_002323724.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92

>emb|CBI34003.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  365 bits (937), Expect = 1e-98
 Identities = 182/291 (62%), Positives = 229/291 (78%), Gaps = 1/291 (0%)
 Frame = +1

Query: 148  PSNASTKFSGTSLLASKLQICASPSTHLRNLGSVKRDSVLRSEASRKSQQLTQELQTNQM 327
            P+  ST  S  ++  SK ++     TH+ NL S+   S LR +ASR+S  LTQEL ++++
Sbjct: 20   PTRPSTTRS--TIFGSKPKLSVIEQTHVTNLASLNSQS-LRLKASRESPGLTQELTSDRL 76

Query: 328  SNVGTDQEK-DLFVEMKDRFLSFKRHSYMENLDHFQILAKGQAPKFMVVACADSRVCPSN 504
             ++   + + D+F E+K RFLSFK+H Y+ENL+ FQ LA  QAPKFMV+ACADSRVCPS 
Sbjct: 77   ESIAEIENRYDVFDEVKHRFLSFKKHKYLENLECFQNLATAQAPKFMVIACADSRVCPSK 136

Query: 505  ILGFKPGEAFTVRSVANLVPEFESGPSETKAGLEFSVNSLEVENILVIGHSCCGGIRALM 684
            ILGF+PGEAF VR+VANLVP +E+GP+ET A LEF+VN+LEVENILVIGHSCCGGIRALM
Sbjct: 137  ILGFEPGEAFMVRNVANLVPLYENGPTETNAALEFAVNTLEVENILVIGHSCCGGIRALM 196

Query: 685  SMQDEVDSSSFIQNWVVIGNNARLSTKAATANLSFEKQCRHCEKESVNRSLLNLLTYPWI 864
             M++EVDSSSFIQ+WVV+G NA+L  KA  + LSF++QCR+CEKES+N SLLNLLTYPWI
Sbjct: 197  GMEEEVDSSSFIQSWVVVGKNAKLRAKATASKLSFDQQCRNCEKESINCSLLNLLTYPWI 256

Query: 865  EERVRKGLLSIHGGYYDFVNCSFEKWTLNYNGSSVGKEGKEYSIKDRQFWS 1017
            +ERV +G+LSIHGGYYDFVNC+FEKWTL+Y      KE   Y +KDR FW+
Sbjct: 257  KERVERGMLSIHGGYYDFVNCTFEKWTLDY------KESGRYLVKDRVFWA 301


>ref|XP_002263870.2| PREDICTED: carbonic anhydrase 2, chloroplastic-like isoform 1 [Vitis
            vinifera]
          Length = 300

 Score =  364 bits (934), Expect = 2e-98
 Identities = 181/291 (62%), Positives = 229/291 (78%), Gaps = 1/291 (0%)
 Frame = +1

Query: 148  PSNASTKFSGTSLLASKLQICASPSTHLRNLGSVKRDSVLRSEASRKSQQLTQELQTNQM 327
            P+  ST  S  ++  SK ++     TH+ NL S+ +   LR +ASR+S  LTQEL ++++
Sbjct: 20   PTRPSTTRS--TIFGSKPKLSVIEQTHVTNLASLNQS--LRLKASRESPGLTQELTSDRL 75

Query: 328  SNVGTDQEK-DLFVEMKDRFLSFKRHSYMENLDHFQILAKGQAPKFMVVACADSRVCPSN 504
             ++   + + D+F E+K RFLSFK+H Y+ENL+ FQ LA  QAPKFMV+ACADSRVCPS 
Sbjct: 76   ESIAEIENRYDVFDEVKHRFLSFKKHKYLENLECFQNLATAQAPKFMVIACADSRVCPSK 135

Query: 505  ILGFKPGEAFTVRSVANLVPEFESGPSETKAGLEFSVNSLEVENILVIGHSCCGGIRALM 684
            ILGF+PGEAF VR+VANLVP +E+GP+ET A LEF+VN+LEVENILVIGHSCCGGIRALM
Sbjct: 136  ILGFEPGEAFMVRNVANLVPLYENGPTETNAALEFAVNTLEVENILVIGHSCCGGIRALM 195

Query: 685  SMQDEVDSSSFIQNWVVIGNNARLSTKAATANLSFEKQCRHCEKESVNRSLLNLLTYPWI 864
             M++EVDSSSFIQ+WVV+G NA+L  KA  + LSF++QCR+CEKES+N SLLNLLTYPWI
Sbjct: 196  GMEEEVDSSSFIQSWVVVGKNAKLRAKATASKLSFDQQCRNCEKESINCSLLNLLTYPWI 255

Query: 865  EERVRKGLLSIHGGYYDFVNCSFEKWTLNYNGSSVGKEGKEYSIKDRQFWS 1017
            +ERV +G+LSIHGGYYDFVNC+FEKWTL+Y      KE   Y +KDR FW+
Sbjct: 256  KERVERGMLSIHGGYYDFVNCTFEKWTLDY------KESGRYLVKDRVFWA 300


>ref|XP_002522651.1| carbonic anhydrase, putative [Ricinus communis]
            gi|223538127|gb|EEF39738.1| carbonic anhydrase, putative
            [Ricinus communis]
          Length = 313

 Score =  358 bits (919), Expect = 1e-96
 Identities = 174/278 (62%), Positives = 226/278 (81%), Gaps = 1/278 (0%)
 Frame = +1

Query: 184  LLASKLQICASPSTHLRNLGSVKRDSVLRSEASRKSQQLTQELQTNQMSNVG-TDQEKDL 360
            +L  K ++  +    LR L +V   S L+ +AS++   LT+EL+T+++ +   T  ++ L
Sbjct: 36   ILDPKEKLGVTEHARLR-LCAVSNKSGLKLKASKEPPALTKELKTDRIESPPVTKDDRAL 94

Query: 361  FVEMKDRFLSFKRHSYMENLDHFQILAKGQAPKFMVVACADSRVCPSNILGFKPGEAFTV 540
            F +MK RF+SFK+++YM+NL+HF+ L+KGQAPKFMV+ACADSRVCPSNILGF+PGEAF V
Sbjct: 95   FDKMKQRFMSFKQNTYMKNLEHFENLSKGQAPKFMVIACADSRVCPSNILGFQPGEAFVV 154

Query: 541  RSVANLVPEFESGPSETKAGLEFSVNSLEVENILVIGHSCCGGIRALMSMQDEVDSSSFI 720
            R+VAN+VP +ESGPSET A LEF+VNSL+VENILVIGHSCCGGIRALMSM D+V++SSFI
Sbjct: 155  RNVANMVPSYESGPSETNAALEFAVNSLKVENILVIGHSCCGGIRALMSMHDDVETSSFI 214

Query: 721  QNWVVIGNNARLSTKAATANLSFEKQCRHCEKESVNRSLLNLLTYPWIEERVRKGLLSIH 900
             +WV +G NAR+ TK A +NLSF++QCRHCEKESVN SL NLLTYPWIEE+VR G LSIH
Sbjct: 215  GSWVAVGMNARVRTKGAASNLSFDRQCRHCEKESVNCSLANLLTYPWIEEKVRNGELSIH 274

Query: 901  GGYYDFVNCSFEKWTLNYNGSSVGKEGKEYSIKDRQFW 1014
            GGYYDFV+C+FEKWTL+Y  S++  E  + ++K+R FW
Sbjct: 275  GGYYDFVDCAFEKWTLDYKASNLKGESGKIAVKNRAFW 312


>emb|CBI19256.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score =  348 bits (894), Expect = 1e-93
 Identities = 171/279 (61%), Positives = 212/279 (75%), Gaps = 5/279 (1%)
 Frame = +1

Query: 193  SKLQICASPSTHLRNLGSVKRDSVLRSEASRKSQQLTQELQTNQMSNV-----GTDQEKD 357
            S+ ++     THL +L SVKR+ V R EAS  S    Q L +N+M N       TDQ  D
Sbjct: 49   SRKKLVRVGETHLGSLPSVKRNLVSRLEASSDSLGCGQHLMSNKMGNEMESLDKTDQGLD 108

Query: 358  LFVEMKDRFLSFKRHSYMENLDHFQILAKGQAPKFMVVACADSRVCPSNILGFKPGEAFT 537
             F E+K RFL FK+  Y+E  +HFQ LAK Q+PKFMV+ACADSRVCPSNILGF+PGEAF 
Sbjct: 109  FFEELKHRFLCFKKQKYLEEPEHFQALAKAQSPKFMVIACADSRVCPSNILGFQPGEAFM 168

Query: 538  VRSVANLVPEFESGPSETKAGLEFSVNSLEVENILVIGHSCCGGIRALMSMQDEVDSSSF 717
            +R+VANLVP  E+GPSET A LEF+VN+LEVENILVIGHS C GI  L+ M+D+V+SSSF
Sbjct: 169  IRNVANLVPPVENGPSETNAALEFAVNTLEVENILVIGHSSCAGIETLVRMRDDVNSSSF 228

Query: 718  IQNWVVIGNNARLSTKAATANLSFEKQCRHCEKESVNRSLLNLLTYPWIEERVRKGLLSI 897
            ++NWV  G  A+L TKAA  +L F +QC++CEKES+N SLLNLLTYPWIE+R RKGLLSI
Sbjct: 229  VENWVANGKVAKLRTKAAAGHLGFYQQCKYCEKESINHSLLNLLTYPWIEDRERKGLLSI 288

Query: 898  HGGYYDFVNCSFEKWTLNYNGSSVGKEGKEYSIKDRQFW 1014
            HGGYYDF+NC+FEKWT+++  SS+ KEG +  +K+R FW
Sbjct: 289  HGGYYDFLNCTFEKWTIDFKRSSIEKEGPKCLVKNRAFW 327


>ref|XP_002323724.1| predicted protein [Populus trichocarpa] gi|222866726|gb|EEF03857.1|
            predicted protein [Populus trichocarpa]
          Length = 256

 Score =  344 bits (882), Expect = 2e-92
 Identities = 165/256 (64%), Positives = 211/256 (82%), Gaps = 1/256 (0%)
 Frame = +1

Query: 250  KRDSVLRSEASRKSQQLTQELQTNQMSNVGT-DQEKDLFVEMKDRFLSFKRHSYMENLDH 426
            + +S LR +ASR+   LT+EL++++   +   +   DLF EMK RFLSFK+H YM+NL+ 
Sbjct: 1    RTNSDLRLQASREPPGLTKELKSDKSERMERIEHGSDLFDEMKQRFLSFKKHKYMQNLEL 60

Query: 427  FQILAKGQAPKFMVVACADSRVCPSNILGFKPGEAFTVRSVANLVPEFESGPSETKAGLE 606
            ++ LAKGQAPKFMV+ACADSRVCPS+ILGF+PGEAF VR+VAN+VP +E+GPSET AGLE
Sbjct: 61   YEKLAKGQAPKFMVIACADSRVCPSSILGFQPGEAFVVRNVANMVPPYENGPSETNAGLE 120

Query: 607  FSVNSLEVENILVIGHSCCGGIRALMSMQDEVDSSSFIQNWVVIGNNARLSTKAATANLS 786
            F+VNSL+VENILVIGHS CGGIRALMSM D+V++SS I +WV +G NAR+ TKAAT  L+
Sbjct: 121  FAVNSLKVENILVIGHSQCGGIRALMSMHDDVETSSLIGSWVSVGMNARVRTKAATKLLN 180

Query: 787  FEKQCRHCEKESVNRSLLNLLTYPWIEERVRKGLLSIHGGYYDFVNCSFEKWTLNYNGSS 966
            F++QC+HCEKESVN SL NLLTYPW+EE+VR G L+IHG YYDFV+C+FEKWTL+Y  S+
Sbjct: 181  FDQQCKHCEKESVNCSLANLLTYPWVEEKVRNGELAIHGAYYDFVDCAFEKWTLDYKESN 240

Query: 967  VGKEGKEYSIKDRQFW 1014
            +  +G   ++KDR FW
Sbjct: 241  LKDKGGRVAVKDRAFW 256


Top