BLASTX nr result

ID: Coptis23_contig00002986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002986
         (3620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|2...   178   8e-42
ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|2...   175   7e-41
ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258...   173   3e-40
gb|AAF04891.1|AC011437_6 Mutator-like transposase [Arabidopsis t...   173   3e-40
ref|XP_003632297.1| PREDICTED: uncharacterized protein LOC100261...   172   6e-40

>ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|222871420|gb|EEF08551.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  178 bits (452), Expect = 8e-42
 Identities = 90/277 (32%), Positives = 154/277 (55%)
 Frame = -2

Query: 1627 GMTWRTILECRKFMKDMAIAQKFSFKHKKNDKTRYKLVCKDPKCKWFVNCSKKADGHILK 1448
            G  +R++ E R+ ++  AIA +F+F++KKND  R  + CK   C W ++ S+ +   ++ 
Sbjct: 19   GQRFRSVHEFRESLRKYAIAHQFAFRYKKNDSHRVTVKCKAEGCPWRIHASRLSTTQLIC 78

Query: 1447 LRLFNPTHTCEGDKNNKNVQAKAPWVANELEDFARAHPTFAPVNLHNEIYNEYDVLISYW 1268
            ++  NP HTCEG       QA   WVA+ +++  +  P + P ++ N+I  EY + ++Y+
Sbjct: 79   IKKMNPAHTCEGSVVTTGHQATRSWVASIIKEKLKVFPNYKPKDIVNDIKQEYGIQLNYF 138

Query: 1267 TTWRTRVLLLERINGNYEKSYMVV*ELKNQILKRNP*SIVKWYKDSVDEFVGFFVVFKQS 1088
              WR + +  E++ G+Y+++Y  +    +++++ NP S+  +       F G FV F  S
Sbjct: 139  QAWRGKEIAKEQLQGSYKEAYNQLPFFCDKLMETNPGSLATFTTKDDSSFEGLFVSFHAS 198

Query: 1087 LDGFVNGCRPIIGLDGCFLKGKYGGYCLSAIGLDAMNGISPFAIFICRGEDKYTWHKMLE 908
            L GFV GCRP++ LD   L  KY G  L+A   D  + + P A  +   E    WH  L 
Sbjct: 199  LYGFVQGCRPLLFLDSLPLNSKYQGTLLAATAADGNDSVFPVAFAVVDAESNDNWHWFLL 258

Query: 907  LLKPHLNKHLSWQLTFISDRQKGLIEAVSNNFPYAHH 797
             LK  L+   S  +TF++D+QKGL E+++  F  ++H
Sbjct: 259  QLKTALS--TSCPITFVADKQKGLKESIAEIFKGSYH 293


>ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|222858024|gb|EEE95571.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  175 bits (444), Expect = 7e-41
 Identities = 94/291 (32%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
 Frame = -2

Query: 1645 NFSLTKGMTWRTILECRKFMKDMAIAQKFSFKHKKNDKTRYKLVCKDPKCKWFVNCSKKA 1466
            NF L  G  +  +  CR+ ++D AIA  F  +  K+DKTR+   C    C W ++ +K  
Sbjct: 4    NFELAVGQEFPDVFSCRRALRDTAIALHFEMQTIKSDKTRFTAKCATEGCPWRIHAAKLP 63

Query: 1465 DGHILKLRLFNPTHTCEGDKNNKNVQAKAPWVANELEDFARAHPTFAPVNLHNEIYNEYD 1286
                  +R  + +HTC G  +  + QA   WVAN +E   + +P + P  +  EI+  + 
Sbjct: 64   GVPTFTIRTIHESHTCGGISHLGHQQASVQWVANSVEQRLKENPNYRPKEILEEIHRVHG 123

Query: 1285 VLISYWTTWRTRVLLLERINGNYEKSYMVV*ELKNQILKRNP*SIVKWYKDSVDE-FVGF 1109
            + +SY   WR +  ++  + G++E+ Y ++ +  +Q+ + NP SI   Y +  D  F   
Sbjct: 124  ITLSYKQAWRGKERIMAAMRGSFEEGYRLLPQYCDQVKRTNPGSIASVYGNPTDNCFQHL 183

Query: 1108 FVVFKQSLDGFVNGCRPIIGLDGCFLKGKYGGYCLSAIGLDAMNGISPFAIFICRGEDKY 929
            F+ F+ S+ GF+N CRP++GLD  FLK KY G    A G D    + P A  +   E+  
Sbjct: 184  FISFQASIYGFLNACRPLLGLDRTFLKSKYLGTLFLATGFDGDGALFPLAFGVVDEENDE 243

Query: 928  TW-------HKMLELLKPHLNKHLSWQLTFISDRQKGLIEAVSNNFPYAHH 797
             W       H +LE     +N     +LT +SDRQKG+++ V  NFP A H
Sbjct: 244  NWMWFLSELHNLLE-----INTENMPRLTILSDRQKGIVDGVEANFPTAFH 289


>ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258751 [Vitis vinifera]
            gi|147858253|emb|CAN83921.1| hypothetical protein
            VITISV_011842 [Vitis vinifera]
          Length = 749

 Score =  173 bits (439), Expect = 3e-40
 Identities = 94/291 (32%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
 Frame = -2

Query: 1645 NFSLTKGMTWRTILECRKFMKDMAIAQKFSFKHKKNDKTRYKLVCKDPKCKWFVNCSKKA 1466
            ++ L  G  +  +  CR+ ++D AIA  F  +  K+DKTR+   C    C W ++ +K  
Sbjct: 172  SYELVVGQEFPDVKSCRRALRDTAIALHFEMQTIKSDKTRFTAKCASDGCPWRIHAAKLP 231

Query: 1465 DGHILKLRLFNPTHTCEGDKNNKNVQAKAPWVANELEDFARAHPTFAPVNLHNEIYNEYD 1286
                  +R  +  HTC G  +  + QA   WVAN +E   R +P + P  +  EI+  + 
Sbjct: 232  GVPTFTIRTIHEAHTCGGIAHLGHQQASVQWVANSVEQRLRENPNYKPKEILEEIHRVHG 291

Query: 1285 VLISYWTTWRTRVLLLERINGNYEKSYMVV*ELKNQILKRNP*SIVKWYKDSVDE-FVGF 1109
            + +SY   WR +  ++  + G++E+ Y ++ +  +Q+ + NP SI   Y +  D  F   
Sbjct: 292  ITLSYKQAWRGKERIMAAMRGSFEEGYRLLPQYCDQVKRTNPGSIASVYGNPTDNCFQRL 351

Query: 1108 FVVFKQSLDGFVNGCRPIIGLDGCFLKGKYGGYCLSAIGLDAMNGISPFAIFICRGEDKY 929
            F+ F+ S+ GF+N CRP++GLD  FLK KY G  L A G D    + P A  +   E+  
Sbjct: 352  FISFQASIYGFLNACRPLLGLDRTFLKSKYLGTLLFATGFDGDGALFPLAFGVVDEENDE 411

Query: 928  TW-------HKMLELLKPHLNKHLSWQLTFISDRQKGLIEAVSNNFPYAHH 797
             W       H +LE     +N     +LT +SDRQKG+++ V  NFP A H
Sbjct: 412  NWMWFLSELHNLLE-----VNTENMPRLTILSDRQKGIVDGVEANFPTAFH 457


>gb|AAF04891.1|AC011437_6 Mutator-like transposase [Arabidopsis thaliana]
            gi|18389286|gb|AAL67086.1| putative Mutator transposase
            [Arabidopsis thaliana] gi|20465953|gb|AAM20162.1|
            putative mutator transposase [Arabidopsis thaliana]
          Length = 757

 Score =  173 bits (438), Expect = 3e-40
 Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 8/290 (2%)
 Frame = -2

Query: 1642 FSLTKGMTWRTILECRKFMKDMAIAQKFSFKHKKNDKTRYKLVCKDPKCKWFVNCSKKAD 1463
            + LT G  +  +  CR+ ++DMAIA  F  +  K+DKTR+   C    C W V+ +K   
Sbjct: 180  YQLTVGQEFPDVKSCRRALRDMAIALHFEMQTIKSDKTRFTAKCSSDGCPWRVHAAKLPG 239

Query: 1462 GHILKLRLFNPTHTCEGDKNNKNVQAKAPWVANELEDFARAHPTFAPVNLHNEIYNEYDV 1283
                 +R  + +H+C G  +  + QA   WVA+ +E   R +P   P  +  EI+  + +
Sbjct: 240  VPTFTIRTIHESHSCGGINHLGHQQASVQWVASSVEQRLRENPNCKPKEILEEIHRVHGI 299

Query: 1282 LISYWTTWRTRVLLLERINGNYEKSYMVV*ELKNQILKRNP*SIVKWYKDSVDE-FVGFF 1106
             +SY   WR +  ++  + G++E+ Y ++ +   Q+ + NP SI   Y    D  F   F
Sbjct: 300  TLSYKQAWRGKERIMATMRGSFEEGYRLLPQYCEQVKRTNPGSIASVYGSPADNCFQRLF 359

Query: 1105 VVFKQSLDGFVNGCRPIIGLDGCFLKGKYGGYCLSAIGLDAMNGISPFAIFICRGEDKYT 926
            + F+ S+ GF+N CRP++GLD  +LK KY G  L A G D    + P A  I   E+   
Sbjct: 360  ISFQASIYGFLNACRPLLGLDRTYLKSKYLGTLLLATGFDGDGALFPLAFGIVDEENDEN 419

Query: 925  W-------HKMLELLKPHLNKHLSWQLTFISDRQKGLIEAVSNNFPYAHH 797
            W       H +LE      N     +LT +SDRQKG++E V  NFP A H
Sbjct: 420  WMWFLCELHNLLE-----TNTENMPRLTILSDRQKGIVEGVEQNFPTAFH 464


>ref|XP_003632297.1| PREDICTED: uncharacterized protein LOC100261309 [Vitis vinifera]
          Length = 752

 Score =  172 bits (436), Expect = 6e-40
 Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 8/291 (2%)
 Frame = -2

Query: 1645 NFSLTKGMTWRTILECRKFMKDMAIAQKFSFKHKKNDKTRYKLVCKDPKCKWFVNCSKKA 1466
            N  L  G  +  +  CR+ ++D AIA  F  +  K+DKTR+   C    C W ++C+K  
Sbjct: 174  NHELVVGQEFSDVQSCRRALRDTAIALHFEIQTVKSDKTRFTAKCASDGCPWRIHCAKLP 233

Query: 1465 DGHILKLRLFNPTHTCEGDKNNKNVQAKAPWVANELEDFARAHPTFAPVNLHNEIYNEYD 1286
                  +R  + +HTC G  +  + QA   WVA+ +E   + +P + P  +  EI+  + 
Sbjct: 234  GVPTFTIRTIHESHTCGGITHLGHQQASVQWVASSVEQSLKENPHYKPKEILEEIHRVHG 293

Query: 1285 VLISYWTTWRTRVLLLERINGNYEKSYMVV*ELKNQILKRNP*SIVKWYKDSVD-EFVGF 1109
            + +SY   WR +  ++  + G++E+ Y ++ +  +QI + NP SI   Y + +D  F   
Sbjct: 294  ITLSYKQAWRGKERIMAAVRGSFEEGYRLLPQYCDQIRRTNPESIALVYANPMDNSFHRL 353

Query: 1108 FVVFKQSLDGFVNGCRPIIGLDGCFLKGKYGGYCLSAIGLDAMNGISPFAIFICRGEDKY 929
            FV F+ S+ GF+N CRP+IGLD   LK KY G  L A G D    + P A  +   E+  
Sbjct: 354  FVSFQASIYGFLNACRPLIGLDRTLLKSKYLGTLLFATGFDGDGALFPLAFGVVDEENDD 413

Query: 928  TW-------HKMLELLKPHLNKHLSWQLTFISDRQKGLIEAVSNNFPYAHH 797
             W       H +LE     +N     +LT +SDRQK ++E V  NFP A H
Sbjct: 414  NWMWFLSELHNLLE-----INTENMPRLTILSDRQKVIVEGVEANFPTAFH 459


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