BLASTX nr result

ID: Coptis23_contig00002984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002984
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269785.2| PREDICTED: palmitoyl-protein thioesterase 1-...   453   e-125
ref|XP_002274560.1| PREDICTED: palmitoyl-protein thioesterase 1 ...   451   e-124
ref|XP_002304295.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124
gb|ABK93080.1| unknown [Populus trichocarpa]                          447   e-123
emb|CBI25849.3| unnamed protein product [Vitis vinifera]              447   e-123

>ref|XP_002269785.2| PREDICTED: palmitoyl-protein thioesterase 1-like, partial [Vitis
            vinifera]
          Length = 301

 Score =  453 bits (1165), Expect = e-125
 Identities = 207/275 (75%), Positives = 241/275 (87%)
 Frame = +1

Query: 253  VLHGIGDQCSNRGVSHFTELLSDWSGSQGYCIEIGSGASDSWFIPLQEQAETACDKVKEM 432
            VLHGIGDQCSN+GV  FTELL ++S S+GYC+E+G G  DSWFIP++EQAE  C+KVKEM
Sbjct: 1    VLHGIGDQCSNKGVKQFTELLRNFSNSEGYCVEVGDGTWDSWFIPMKEQAEIVCNKVKEM 60

Query: 433  KELSKGFNIVGLSQGNLIGRAVIEYCDGVPPINNFISLGGPHAGTASVPLCGSGIFCIIA 612
            +EL  G+NIVGLSQGNLIGR V+E+CDG PP+ NF+SL GPHAGTASVPLCGSG+FCIIA
Sbjct: 61   EELRDGYNIVGLSQGNLIGRGVVEFCDGGPPVKNFVSLAGPHAGTASVPLCGSGVFCIIA 120

Query: 613  DMLIKSEIYSKYVQAHLAPSGFLKIPTDIPAYLNGCKFLPKLNNELPDEKNSTYKERFSS 792
            D LIKS+IYS YVQ HLAPSG+LK+P DIP YL  C+FLPKLNNELPDE+NSTYKERFSS
Sbjct: 121  DNLIKSQIYSDYVQTHLAPSGYLKLPNDIPKYLEKCRFLPKLNNELPDERNSTYKERFSS 180

Query: 793  LQNLVLIMFEHETVLIPKETSWFGYYPDGAFNPVLPPQETTLYIEDWIGLRTLDETGKVK 972
            L+NLVLIMFE +TVLIPKETSWFGYYPDGAF PVLPPQ+T LY EDWIGL+TLD+ G+VK
Sbjct: 181  LENLVLIMFEQDTVLIPKETSWFGYYPDGAFEPVLPPQQTKLYTEDWIGLKTLDDAGRVK 240

Query: 973  FLSVSGNHLGISQSDMKMYVVPYLKDQTSTKTESR 1077
            ++SV GNHLGIS SDMK YVVPYL+++ S +  +R
Sbjct: 241  YISVPGNHLGISHSDMKQYVVPYLEEKASAEVITR 275


>ref|XP_002274560.1| PREDICTED: palmitoyl-protein thioesterase 1 [Vitis vinifera]
            gi|297734597|emb|CBI16648.3| unnamed protein product
            [Vitis vinifera]
          Length = 340

 Score =  451 bits (1160), Expect = e-124
 Identities = 215/305 (70%), Positives = 253/305 (82%), Gaps = 1/305 (0%)
 Frame = +1

Query: 253  VLHGIGDQCSNRGVSHFTELLSDWSGSQGYCIEIGSGASDSWFIPLQEQAETACDKVKEM 432
            VLHGIGD+CSNRG++HFTELL +WS SQGYCIEIG G  DSW +PL EQ    C+KVKEM
Sbjct: 34   VLHGIGDKCSNRGITHFTELLGNWSSSQGYCIEIGDGTWDSWVLPLLEQTAIVCEKVKEM 93

Query: 433  KELSKGFNIVGLSQGNLIGRAVIEYCDGVPPINNFISLGGPHAGTASVPLCGSGIFCIIA 612
             ELS+G+NIVGLSQGN+I R VIE+CDG PP+ NFISLGGPHAGTASVPLCGSG  CI+ 
Sbjct: 94   TELSEGYNIVGLSQGNVIARGVIEFCDGGPPVKNFISLGGPHAGTASVPLCGSGFICILV 153

Query: 613  DMLIKSEIYSKYVQAHLAPSGFLKIPTDIPAYLNGCKFLPKLNNELPDEKNSTYKERFSS 792
            D LIKS IYS YVQ HLAPSG+LKIPTDI +YL GC+FLPKLNNE+ D++NSTYKERFSS
Sbjct: 154  DNLIKSGIYSDYVQEHLAPSGYLKIPTDIISYLEGCRFLPKLNNEIIDKRNSTYKERFSS 213

Query: 793  LQNLVLIMFEHETVLIPKETSWFGYYPDGAFNPVLPPQETTLYIEDWIGLRTLDETGKVK 972
            LQNLVLIMFEH+T+LIPKET+WFGYYPDG+F+ V P  ET LY EDWIGL+TLDE GKVK
Sbjct: 214  LQNLVLIMFEHDTILIPKETAWFGYYPDGSFSSVFPANETELYTEDWIGLKTLDEAGKVK 273

Query: 973  FLSVSGNHLGISQSDMKMYVVPYLKDQTSTKTESRELPANNRWPLSVWTVIAELIGL-ND 1149
            F+SV GNHL IS+SDMK Y+VPYL+DQ ST+    +  +++R   S+   + E++GL  +
Sbjct: 274  FISVPGNHLAISRSDMKTYMVPYLEDQASTQPVIID-SSSHRGSSSIRNFVVEMVGLTKN 332

Query: 1150 RPLLL 1164
            RPLLL
Sbjct: 333  RPLLL 337


>ref|XP_002304295.1| predicted protein [Populus trichocarpa] gi|222841727|gb|EEE79274.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  450 bits (1157), Expect = e-124
 Identities = 216/318 (67%), Positives = 253/318 (79%), Gaps = 19/318 (5%)
 Frame = +1

Query: 253  VLHGIGDQCSNRGVSHFTELLSDWSGSQGYCIEIGSGASDSWFIPLQEQAETACDKVKEM 432
            VLHGIGDQC NRGV HFTE L+  SGS GYC+EIG GA DSWF+PL+EQ E  CDK+K+M
Sbjct: 30   VLHGIGDQCKNRGVKHFTEELTSISGSPGYCLEIGDGAWDSWFMPLEEQTEIVCDKIKKM 89

Query: 433  KELSKGFNIVGLSQGNLIGRAVIEYCDGVPPINNFISLGGPHAGTASVPLCGSGIFCIIA 612
            KELSKG+NIVGLSQGNLIGR V+E+CDG PP+ NFISLGGPHAGTASVPLCGSGIFCI+A
Sbjct: 90   KELSKGYNIVGLSQGNLIGRGVVEFCDGGPPVKNFISLGGPHAGTASVPLCGSGIFCILA 149

Query: 613  DMLIKSEIYSKYVQAHLAPSGFLKIPTDIPAYLNGCKFLPKLNNELPDEKNSTYKERFSS 792
            D L+KSEIYS YVQAHLAPSG+LK P DIP YL  C+FLPKLNNE+P+ +N+TYKERFSS
Sbjct: 150  DALMKSEIYSDYVQAHLAPSGYLKFPNDIPRYLEKCRFLPKLNNEIPEGRNTTYKERFSS 209

Query: 793  LQNLVLIMFEHETVLIPKETSWFGYYPDGAFNPVLPPQETTLYIEDWIGLRTLDETGKVK 972
            LQNLVLIMFE++++LIPKETSWFGYYPDGAF P++P +ET LY EDWIGLRTLDE G+V 
Sbjct: 210  LQNLVLIMFENDSILIPKETSWFGYYPDGAFKPIVPAKETKLYTEDWIGLRTLDEAGRVH 269

Query: 973  FLSVSGNHLGISQSDMKMYVVPYLKDQTSTKTES----RELPA---------------NN 1095
            F++VSG HLGIS+SD+K +VVP+L D+ S K  S      LP                N+
Sbjct: 270  FVNVSGGHLGISKSDLKKHVVPFLVDEASVKKYSNARVHRLPGTITQNYHRKQVAGSFND 329

Query: 1096 RWPLSVWTVIAELIGLND 1149
              P SV  +  EL+GL +
Sbjct: 330  GTPSSVKDIFRELVGLEE 347


>gb|ABK93080.1| unknown [Populus trichocarpa]
          Length = 394

 Score =  447 bits (1151), Expect = e-123
 Identities = 216/318 (67%), Positives = 251/318 (78%), Gaps = 19/318 (5%)
 Frame = +1

Query: 253  VLHGIGDQCSNRGVSHFTELLSDWSGSQGYCIEIGSGASDSWFIPLQEQAETACDKVKEM 432
            VLHGIGDQC NRGV HFTE L+  SGS GYC+EIG GA DSWF+PL+EQ E  CDK+K+M
Sbjct: 72   VLHGIGDQCKNRGVKHFTEELTSISGSPGYCLEIGDGAWDSWFMPLEEQTEIVCDKIKQM 131

Query: 433  KELSKGFNIVGLSQGNLIGRAVIEYCDGVPPINNFISLGGPHAGTASVPLCGSGIFCIIA 612
            KELSKG+NIVGLSQGNLIGR V+E+CDG PP+ NFISLGGPHAGTASVPLCGSGIFCI+A
Sbjct: 132  KELSKGYNIVGLSQGNLIGRGVVEFCDGGPPVKNFISLGGPHAGTASVPLCGSGIFCILA 191

Query: 613  DMLIKSEIYSKYVQAHLAPSGFLKIPTDIPAYLNGCKFLPKLNNELPDEKNSTYKERFSS 792
            D L+KSEIYS YVQAHLAPSG+LK P DIP YL  C+FLPKLNNE P+  N+TYKERFSS
Sbjct: 192  DALMKSEIYSDYVQAHLAPSGYLKFPNDIPRYLEKCRFLPKLNNESPEGMNTTYKERFSS 251

Query: 793  LQNLVLIMFEHETVLIPKETSWFGYYPDGAFNPVLPPQETTLYIEDWIGLRTLDETGKVK 972
            LQNLVLIMFE++++LIPKETSWFGYYPDGAF P++P +ET LY EDWIGLRTLDE G+V 
Sbjct: 252  LQNLVLIMFENDSILIPKETSWFGYYPDGAFKPIVPAKETKLYTEDWIGLRTLDEAGRVH 311

Query: 973  FLSVSGNHLGISQSDMKMYVVPYLKDQTSTKTES----RELPA---------------NN 1095
            F++VSG HLGIS+SD+K +VVP+L D+ S K  S      LP                N+
Sbjct: 312  FVNVSGGHLGISKSDLKKHVVPFLVDEASVKKYSNARVHRLPGTTTQNYHRKQVAGSFND 371

Query: 1096 RWPLSVWTVIAELIGLND 1149
              P SV  +  EL+GL +
Sbjct: 372  GTPSSVKDIFRELVGLEE 389


>emb|CBI25849.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  447 bits (1149), Expect = e-123
 Identities = 204/272 (75%), Positives = 238/272 (87%)
 Frame = +1

Query: 262  GIGDQCSNRGVSHFTELLSDWSGSQGYCIEIGSGASDSWFIPLQEQAETACDKVKEMKEL 441
            GIGDQCSN+GV  FTELL ++S S+GYC+E+G G  DSWFIP++EQAE  C+KVKEM+EL
Sbjct: 3    GIGDQCSNKGVKQFTELLRNFSNSEGYCVEVGDGTWDSWFIPMKEQAEIVCNKVKEMEEL 62

Query: 442  SKGFNIVGLSQGNLIGRAVIEYCDGVPPINNFISLGGPHAGTASVPLCGSGIFCIIADML 621
              G+NIVGLSQGNLIGR V+E+CDG PP+ NF+SL GPHAGTASVPLCGSG+FCIIAD L
Sbjct: 63   RDGYNIVGLSQGNLIGRGVVEFCDGGPPVKNFVSLAGPHAGTASVPLCGSGVFCIIADNL 122

Query: 622  IKSEIYSKYVQAHLAPSGFLKIPTDIPAYLNGCKFLPKLNNELPDEKNSTYKERFSSLQN 801
            IKS+IYS YVQ HLAPSG+LK+P DIP YL  C+FLPKLNNELPDE+NSTYKERFSSL+N
Sbjct: 123  IKSQIYSDYVQTHLAPSGYLKLPNDIPKYLEKCRFLPKLNNELPDERNSTYKERFSSLEN 182

Query: 802  LVLIMFEHETVLIPKETSWFGYYPDGAFNPVLPPQETTLYIEDWIGLRTLDETGKVKFLS 981
            LVLIMFE +TVLIPKETSWFGYYPDGAF PVLPPQ+T LY EDWIGL+TLD+ G+VK++S
Sbjct: 183  LVLIMFEQDTVLIPKETSWFGYYPDGAFEPVLPPQQTKLYTEDWIGLKTLDDAGRVKYIS 242

Query: 982  VSGNHLGISQSDMKMYVVPYLKDQTSTKTESR 1077
            V GNHLGIS SDMK YVVPYL+++ S +  +R
Sbjct: 243  VPGNHLGISHSDMKQYVVPYLEEKASAEVITR 274


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