BLASTX nr result

ID: Coptis23_contig00002978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002978
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21503.3| unnamed protein product [Vitis vinifera]               85   1e-23
ref|XP_002276109.1| PREDICTED: 4-alpha-glucanotransferase, chlor...    85   1e-23
dbj|BAM74439.1| disproportionating enzyme 1 [Vigna angularis]          79   2e-20
ref|XP_003526830.1| PREDICTED: 4-alpha-glucanotransferase, chlor...    78   1e-19
ref|XP_003522499.1| PREDICTED: 4-alpha-glucanotransferase, chlor...    79   1e-19

>emb|CBI21503.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score = 84.7 bits (208), Expect(2) = 1e-23
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -1

Query: 338 DDISWKLIKAAVSSVAQTAIVPMQDILGLGSSARMNIPATQSGNW 204
           DDISW LI+AA+SSVAQTAI+PMQD+LGLG+SARMNIPATQSGNW
Sbjct: 511 DDISWALIQAALSSVAQTAIIPMQDVLGLGNSARMNIPATQSGNW 555



 Score = 50.1 bits (118), Expect(2) = 1e-23
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = -2

Query: 133 QSGNWNWRMSSSFGLDCLQQELKKLRDMLLIYDRL 29
           QSGNW WR+ SS   D L+ E KKLRD+L IY RL
Sbjct: 551 QSGNWGWRLPSSMSFDDLESEAKKLRDLLSIYGRL 585


>ref|XP_002276109.1| PREDICTED: 4-alpha-glucanotransferase,
           chloroplastic/amyloplastic-like [Vitis vinifera]
          Length = 583

 Score = 84.7 bits (208), Expect(2) = 1e-23
 Identities = 39/45 (86%), Positives = 44/45 (97%)
 Frame = -1

Query: 338 DDISWKLIKAAVSSVAQTAIVPMQDILGLGSSARMNIPATQSGNW 204
           DDISW LI+AA+SSVAQTAI+PMQD+LGLG+SARMNIPATQSGNW
Sbjct: 509 DDISWALIQAALSSVAQTAIIPMQDVLGLGNSARMNIPATQSGNW 553



 Score = 50.1 bits (118), Expect(2) = 1e-23
 Identities = 22/35 (62%), Positives = 25/35 (71%)
 Frame = -2

Query: 133 QSGNWNWRMSSSFGLDCLQQELKKLRDMLLIYDRL 29
           QSGNW WR+ SS   D L+ E KKLRD+L IY RL
Sbjct: 549 QSGNWGWRLPSSMSFDDLESEAKKLRDLLSIYGRL 583


>dbj|BAM74439.1| disproportionating enzyme 1 [Vigna angularis]
          Length = 562

 Score = 78.6 bits (192), Expect(2) = 2e-20
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -1

Query: 341 GDDISWKLIKAAVSSVAQTAIVPMQDILGLGSSARMNIPATQSGNW 204
           GDDISW LI+  + SV+QTAI+PMQD+LGLG+SARMNIPATQ GNW
Sbjct: 487 GDDISWALIQRVLGSVSQTAIIPMQDVLGLGNSARMNIPATQFGNW 532



 Score = 45.4 bits (106), Expect(2) = 2e-20
 Identities = 19/35 (54%), Positives = 26/35 (74%)
 Frame = -2

Query: 133 QSGNWNWRMSSSFGLDCLQQELKKLRDMLLIYDRL 29
           Q GNW WR++SS   D L++E  +LR+MLL+Y RL
Sbjct: 528 QFGNWGWRIASSVSFDGLEREADRLREMLLMYGRL 562


>ref|XP_003526830.1| PREDICTED: 4-alpha-glucanotransferase,
           chloroplastic/amyloplastic-like [Glycine max]
          Length = 568

 Score = 78.2 bits (191), Expect(2) = 1e-19
 Identities = 35/46 (76%), Positives = 41/46 (89%)
 Frame = -1

Query: 341 GDDISWKLIKAAVSSVAQTAIVPMQDILGLGSSARMNIPATQSGNW 204
           GDDI W LI+  ++SVAQTAI+PMQD+LGLG+SARMNIPATQ GNW
Sbjct: 493 GDDIPWALIQRVLASVAQTAIIPMQDVLGLGNSARMNIPATQFGNW 538



 Score = 43.1 bits (100), Expect(2) = 1e-19
 Identities = 18/35 (51%), Positives = 25/35 (71%)
 Frame = -2

Query: 133 QSGNWNWRMSSSFGLDCLQQELKKLRDMLLIYDRL 29
           Q GNW WR++SS   D L++E  +LR+ML +Y RL
Sbjct: 534 QFGNWGWRIASSVSFDGLEREADRLREMLSMYGRL 568


>ref|XP_003522499.1| PREDICTED: 4-alpha-glucanotransferase,
           chloroplastic/amyloplastic-like [Glycine max]
          Length = 565

 Score = 78.6 bits (192), Expect(2) = 1e-19
 Identities = 35/46 (76%), Positives = 42/46 (91%)
 Frame = -1

Query: 341 GDDISWKLIKAAVSSVAQTAIVPMQDILGLGSSARMNIPATQSGNW 204
           GD+ISW LI+  ++SVAQTAI+PMQD+LGLG+SARMNIPATQ GNW
Sbjct: 490 GDEISWALIQRVLASVAQTAIIPMQDVLGLGNSARMNIPATQFGNW 535



 Score = 42.7 bits (99), Expect(2) = 1e-19
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = -2

Query: 133 QSGNWNWRMSSSFGLDCLQQELKKLRDMLLIYDRL 29
           Q GNW WR+ SS   D L++E  +LR+ML +Y RL
Sbjct: 531 QFGNWGWRIGSSVSFDGLEREADRLREMLSMYGRL 565


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