BLASTX nr result

ID: Coptis23_contig00002976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002976
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ri...    96   4e-18
ref|XP_003530306.1| PREDICTED: MATE efflux family protein 2, chl...    95   7e-18
ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...    94   1e-17
ref|XP_003623384.1| MATE efflux family protein expressed [Medica...    94   1e-17
emb|CBI18108.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223533979|gb|EEF35701.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 560

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/89 (58%), Positives = 61/89 (68%)
 Frame = -3

Query: 285 FFRFLPHAWNEFKFDELGIEXXXXXXXXXXXXXXXXXXXLVDSAFVGHLGSVELAAVGVS 106
           F RF+    + F+ DE+GIE                   LVD+AF+GH G+VELAAVGVS
Sbjct: 82  FSRFVSRLRDGFRVDEIGIEILSIALPAALALAADPIASLVDTAFIGHTGAVELAAVGVS 141

Query: 105 MSVFNLVSNLFNVPLLNITTSFVAEEQAL 19
           +SVFNLVS LFNVPLLN+TTSFVAEEQAL
Sbjct: 142 VSVFNLVSKLFNVPLLNVTTSFVAEEQAL 170


>ref|XP_003530306.1| PREDICTED: MATE efflux family protein 2, chloroplastic-like
           [Glycine max]
          Length = 535

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/91 (58%), Positives = 60/91 (65%)
 Frame = -3

Query: 279 RFLPHAWNEFKFDELGIEXXXXXXXXXXXXXXXXXXXLVDSAFVGHLGSVELAAVGVSMS 100
           R   + W  FKFDELG+E                   L+D+AFVGH+G+VELAAVGVS S
Sbjct: 77  RHFSNGW--FKFDELGMEIVLIALPAALALAADPIASLIDTAFVGHIGAVELAAVGVSAS 134

Query: 99  VFNLVSNLFNVPLLNITTSFVAEEQALAYAE 7
           VFNLVS  FNVPLLN+TTSFVAEEQAL   E
Sbjct: 135 VFNLVSKAFNVPLLNVTTSFVAEEQALIRKE 165


>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/78 (67%), Positives = 56/78 (71%)
 Frame = -3

Query: 252 FKFDELGIEXXXXXXXXXXXXXXXXXXXLVDSAFVGHLGSVELAAVGVSMSVFNLVSNLF 73
           F  DELG+E                   LVD+AFVGHLGSVELAAVGVS+SVFNLVS LF
Sbjct: 96  FGADELGLEILSIALPAALALAADPIASLVDTAFVGHLGSVELAAVGVSVSVFNLVSKLF 155

Query: 72  NVPLLNITTSFVAEEQAL 19
           NVPLLNITTSFVAEEQAL
Sbjct: 156 NVPLLNITTSFVAEEQAL 173


>ref|XP_003623384.1| MATE efflux family protein expressed [Medicago truncatula]
           gi|355498399|gb|AES79602.1| MATE efflux family protein
           expressed [Medicago truncatula]
          Length = 566

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 50/78 (64%), Positives = 57/78 (73%)
 Frame = -3

Query: 252 FKFDELGIEXXXXXXXXXXXXXXXXXXXLVDSAFVGHLGSVELAAVGVSMSVFNLVSNLF 73
           FKFDELG++                   L+D+AFVGH+G+VELAAVGVS SVFNLVS +F
Sbjct: 110 FKFDELGMDMLSIALPAAVALAADPIASLIDTAFVGHIGAVELAAVGVSASVFNLVSKVF 169

Query: 72  NVPLLNITTSFVAEEQAL 19
           NVPLLNITTSFVAEEQAL
Sbjct: 170 NVPLLNITTSFVAEEQAL 187


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 53/78 (67%), Positives = 56/78 (71%)
 Frame = -3

Query: 252 FKFDELGIEXXXXXXXXXXXXXXXXXXXLVDSAFVGHLGSVELAAVGVSMSVFNLVSNLF 73
           F  DELG+E                   LVD+AFVGHLGSVELAAVGVS+SVFNLVS LF
Sbjct: 96  FGADELGLEILSIALPAALALAADPIASLVDTAFVGHLGSVELAAVGVSVSVFNLVSKLF 155

Query: 72  NVPLLNITTSFVAEEQAL 19
           NVPLLNITTSFVAEEQAL
Sbjct: 156 NVPLLNITTSFVAEEQAL 173


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