BLASTX nr result

ID: Coptis23_contig00002974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002974
         (1469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279959.2| PREDICTED: exopolygalacturonase-like [Vitis ...   246   8e-63
emb|CBI37725.3| unnamed protein product [Vitis vinifera]              239   2e-60
ref|XP_002312795.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-58
gb|AAQ62998.1| oil palm polygalacturonase allergen PEST459 [Elae...   221   3e-55
ref|XP_004144956.1| PREDICTED: exopolygalacturonase-like [Cucumi...   206   2e-50

>ref|XP_002279959.2| PREDICTED: exopolygalacturonase-like [Vitis vinifera]
          Length = 424

 Score =  246 bits (629), Expect = 8e-63
 Identities = 117/189 (61%), Positives = 142/189 (75%)
 Frame = +3

Query: 162 AFTSAWKAACESTGDVTLLIPKGTYSIGPIQFLGPCESLNSLTMQMQGLLKAPIGLRSFG 341
           AFT+AWK AC STG V LLIPKGTY IGPI F GPC S++SLT+ M+G LKA   L  +G
Sbjct: 71  AFTAAWKEACASTGKVKLLIPKGTYMIGPITFAGPCNSVSSLTVVMKGYLKATTDLSEYG 130

Query: 342 SSSDWIEFGWVGGLTLIGSGTFDGQGASYWPLDNCSTNKNCKLLPSNVKFLSMTKMRLRG 521
            S+ WIEFGW+ GLTL G GTFDGQG   WP + C  N NCKLLP+N+KF++M K  +RG
Sbjct: 131 FSAGWIEFGWMKGLTLTGGGTFDGQGVEAWPYNKCPINANCKLLPTNLKFIAMNKTVVRG 190

Query: 522 ITSTNSKFFHIVLLDCKDFHGTRIEISAPANNPNTDGIHIERSTGVLISNSVIGTGSN*C 701
           ITS NSKFFHI L++C +F G++I+ISAP N+PNTDGIHIERS+GV  S S+IGTG +  
Sbjct: 191 ITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHIERSSGVYFSRSLIGTGDDCI 250

Query: 702 WWTNGNVRV 728
               GN +V
Sbjct: 251 SVGQGNSQV 259


>emb|CBI37725.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  239 bits (609), Expect = 2e-60
 Identities = 116/189 (61%), Positives = 139/189 (73%)
 Frame = +3

Query: 162 AFTSAWKAACESTGDVTLLIPKGTYSIGPIQFLGPCESLNSLTMQMQGLLKAPIGLRSFG 341
           AFT+AWK AC STG V LLIPKGTY IGPI F GPC S++SLT    G LKA   L  +G
Sbjct: 71  AFTAAWKEACASTGKVKLLIPKGTYMIGPITFAGPCNSVSSLT----GYLKATTDLSEYG 126

Query: 342 SSSDWIEFGWVGGLTLIGSGTFDGQGASYWPLDNCSTNKNCKLLPSNVKFLSMTKMRLRG 521
            S+ WIEFGW+ GLTL G GTFDGQG   WP + C  N NCKLLP+N+KF++M K  +RG
Sbjct: 127 FSAGWIEFGWMKGLTLTGGGTFDGQGVEAWPYNKCPINANCKLLPTNLKFIAMNKTVVRG 186

Query: 522 ITSTNSKFFHIVLLDCKDFHGTRIEISAPANNPNTDGIHIERSTGVLISNSVIGTGSN*C 701
           ITS NSKFFHI L++C +F G++I+ISAP N+PNTDGIHIERS+GV  S S+IGTG +  
Sbjct: 187 ITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHIERSSGVYFSRSLIGTGDDCI 246

Query: 702 WWTNGNVRV 728
               GN +V
Sbjct: 247 SVGQGNSQV 255


>ref|XP_002312795.1| predicted protein [Populus trichocarpa] gi|222849203|gb|EEE86750.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  233 bits (593), Expect = 1e-58
 Identities = 110/189 (58%), Positives = 143/189 (75%)
 Frame = +3

Query: 162 AFTSAWKAACESTGDVTLLIPKGTYSIGPIQFLGPCESLNSLTMQMQGLLKAPIGLRSFG 341
           AF +AWK AC +TG V LLIPKGTY IGP++F GPC++++SLT    G LKA   L  +G
Sbjct: 61  AFIAAWKEACRATGKVELLIPKGTYLIGPVKFAGPCKNVSSLT----GYLKATAKLSRYG 116

Query: 342 SSSDWIEFGWVGGLTLIGSGTFDGQGASYWPLDNCSTNKNCKLLPSNVKFLSMTKMRLRG 521
           S + W+EFGW+  LTL G GTFDGQGA  WP +NC+ +  CKLLP+NVKF++M +  ++G
Sbjct: 117 SGTGWVEFGWLERLTLTGGGTFDGQGAKAWPYNNCTNDSKCKLLPTNVKFVAMNQTVVQG 176

Query: 522 ITSTNSKFFHIVLLDCKDFHGTRIEISAPANNPNTDGIHIERSTGVLISNSVIGTGSN*C 701
           ITS NSKFFHI L++CK+F GT+I+ISAPA++PNTDGIH+ERS+ V IS S+IGTG +  
Sbjct: 177 ITSLNSKFFHIALVECKNFKGTKIKISAPADSPNTDGIHVERSSSVYISQSLIGTGDDCI 236

Query: 702 WWTNGNVRV 728
               GN +V
Sbjct: 237 SIGQGNSQV 245


>gb|AAQ62998.1| oil palm polygalacturonase allergen PEST459 [Elaeis guineensis]
          Length = 399

 Score =  221 bits (564), Expect = 3e-55
 Identities = 103/178 (57%), Positives = 132/178 (74%)
 Frame = +3

Query: 162 AFTSAWKAACESTGDVTLLIPKGTYSIGPIQFLGPCESLNSLTMQMQGLLKAPIGLRSFG 341
           AF +AWKAAC + G V L IP GTY IGP +F GPC++++SLT+ M+G LKA   L  + 
Sbjct: 47  AFMAAWKAACAAVGVVKLHIPAGTYLIGPTKFAGPCKNVHSLTVNMKGYLKATTDLSQYV 106

Query: 342 SSSDWIEFGWVGGLTLIGSGTFDGQGASYWPLDNCSTNKNCKLLPSNVKFLSMTKMRLRG 521
           +  DW+EF WV  L L G GTFDGQGA  WP + C TNK+CK+LP++VKF++ +   ++ 
Sbjct: 107 TGDDWVEFAWVDKLILTGGGTFDGQGAVSWPYNKCPTNKHCKVLPTSVKFVATSNTLVQN 166

Query: 522 ITSTNSKFFHIVLLDCKDFHGTRIEISAPANNPNTDGIHIERSTGVLISNSVIGTGSN 695
           I S NSKFFHI L+ CK+F G  I+I+AP+N+PNTDGIHIERSTGV I NSVIGTG +
Sbjct: 167 IKSLNSKFFHIALVGCKNFWGKNIQITAPSNSPNTDGIHIERSTGVTIYNSVIGTGDD 224


>ref|XP_004144956.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
           gi|449471315|ref|XP_004153273.1| PREDICTED:
           exopolygalacturonase-like [Cucumis sativus]
           gi|449500188|ref|XP_004161029.1| PREDICTED:
           exopolygalacturonase-like [Cucumis sativus]
          Length = 406

 Score =  206 bits (523), Expect = 2e-50
 Identities = 98/189 (51%), Positives = 134/189 (70%)
 Frame = +3

Query: 162 AFTSAWKAACESTGDVTLLIPKGTYSIGPIQFLGPCESLNSLTMQMQGLLKAPIGLRSFG 341
           AF +AW+ AC+S G VT LIPKGTY +GP+ F GPC++++SLT++M+    A   L  +G
Sbjct: 65  AFLAAWRMACDSAGVVTFLIPKGTYLVGPVIFSGPCKNVSSLTVKME----ASTNLSKYG 120

Query: 342 SSSDWIEFGWVGGLTLIGSGTFDGQGASYWPLDNCSTNKNCKLLPSNVKFLSMTKMRLRG 521
           S + WIEF W+ GLTL G GTFDG+GA  WP +NC  + NCKLLP+N+KF+++    ++ 
Sbjct: 121 SGAGWIEFRWMEGLTLNGGGTFDGRGAEAWPFNNCRDDYNCKLLPTNLKFVALNNTVVQH 180

Query: 522 ITSTNSKFFHIVLLDCKDFHGTRIEISAPANNPNTDGIHIERSTGVLISNSVIGTGSN*C 701
           ITS NSKFFH+ L+ CK F G+ ++ISAP N+PNTDGIHI+RS+ +  S S I TG +  
Sbjct: 181 ITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIHFSLSHIQTGDDCI 240

Query: 702 WWTNGNVRV 728
               GN +V
Sbjct: 241 SIGQGNSQV 249


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