BLASTX nr result

ID: Coptis23_contig00002966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002966
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27189.3| unnamed protein product [Vitis vinifera]              360   e-106
emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera]   360   e-106
ref|XP_002276172.2| PREDICTED: coatomer subunit delta [Vitis vin...   360   e-106
ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucu...   357   e-106
ref|XP_004137761.1| PREDICTED: coatomer subunit delta-like [Cucu...   357   e-106

>emb|CBI27189.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  360 bits (925), Expect(2) = e-106
 Identities = 186/270 (68%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
 Frame = -1

Query: 1123 AEGEVILEDVLLNPCQYKSVALP-SDPIILTVEEKLNVSLKRNGGMSNFDVQGALWLKIL 947
            AEGEVILEDV       +S A P +DPI L+ EE+LNV+LKR+GG+SNFDVQG L L+IL
Sbjct: 292  AEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEERLNVTLKRDGGVSNFDVQGTLSLQIL 351

Query: 946  NEKDGLLLIQVKTPEDPGIHFRTHPNINKELFTKLNVLGLKDPDRPFPTDRDS-VAGICL 770
            N++DGL+ +Q++T  +PGI F+THPNINKELF+  N+LGLKDP+RPFPT +    AG+ L
Sbjct: 352  NQEDGLIQVQIETGSNPGILFKTHPNINKELFSNENILGLKDPNRPFPTGQGGDAAGVGL 411

Query: 769  LKWTMQSVDEVMVPLTINCWASSLRNETFVSLEYEASPMTDLQKVVISIPLPALREAPNV 590
            LKW MQSVDE  VPLTINCW S   NET+VS+EYEAS M DL+ VVIS+PLPALREAPNV
Sbjct: 412  LKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNV 471

Query: 589  RRVDGELRYNSQNSILEWSISLIDKSNRSGSMEFVVPPADSSVFFPISASFTATRTFSDL 410
            R++DGE RY+S+NSILEWSI LID SNRSGSMEFVVPPADSSVFFPIS  FTA +TFSDL
Sbjct: 472  RQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDL 531

Query: 409  KVVDILSLHGGHSPTFSQSTQLITGRYEVV 320
            KVV++L L GG  P FSQ T LIT  Y+VV
Sbjct: 532  KVVNVLPLRGGPPPKFSQRTTLITENYQVV 561



 Score = 53.5 bits (127), Expect(2) = e-106
 Identities = 29/41 (70%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -3

Query: 1289 SKGCPPEFVTAPLKG-GMQLGKTNKTNKFLESLRAEGEVIL 1170
            SKG P    TAP KG GMQL KT K N+FLESL+AEGEVIL
Sbjct: 258  SKGRPSSSATAPPKGLGMQLNKTQKANQFLESLKAEGEVIL 298


>emb|CAN60953.1| hypothetical protein VITISV_008875 [Vitis vinifera]
          Length = 531

 Score =  360 bits (925), Expect(2) = e-106
 Identities = 186/270 (68%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
 Frame = -1

Query: 1123 AEGEVILEDVLLNPCQYKSVALP-SDPIILTVEEKLNVSLKRNGGMSNFDVQGALWLKIL 947
            AEGEVILEDV       +S A P +DPI L+ EE+LNV+LKR+GG+SNFDVQG L L+IL
Sbjct: 262  AEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEERLNVTLKRDGGVSNFDVQGTLSLQIL 321

Query: 946  NEKDGLLLIQVKTPEDPGIHFRTHPNINKELFTKLNVLGLKDPDRPFPTDRDS-VAGICL 770
            N++DGL+ +Q++T  +PGI F+THPNINKELF+  N+LGLKDP+RPFPT +    AG+ L
Sbjct: 322  NQEDGLIQVQIETGSNPGILFKTHPNINKELFSNENILGLKDPNRPFPTGQGGDAAGVGL 381

Query: 769  LKWTMQSVDEVMVPLTINCWASSLRNETFVSLEYEASPMTDLQKVVISIPLPALREAPNV 590
            LKW MQSVDE  VPLTINCW S   NET+VS+EYEAS M DL+ VVIS+PLPALREAPNV
Sbjct: 382  LKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNV 441

Query: 589  RRVDGELRYNSQNSILEWSISLIDKSNRSGSMEFVVPPADSSVFFPISASFTATRTFSDL 410
            R++DGE RY+S+NSILEWSI LID SNRSGSMEFVVPPADSSVFFPIS  FTA +TFSDL
Sbjct: 442  RQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDL 501

Query: 409  KVVDILSLHGGHSPTFSQSTQLITGRYEVV 320
            KVV++L L GG  P FSQ T LIT  Y+VV
Sbjct: 502  KVVNVLPLRGGPPPKFSQRTTLITENYQVV 531



 Score = 53.5 bits (127), Expect(2) = e-106
 Identities = 29/41 (70%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -3

Query: 1289 SKGCPPEFVTAPLKG-GMQLGKTNKTNKFLESLRAEGEVIL 1170
            SKG P    TAP KG GMQL KT K N+FLESL+AEGEVIL
Sbjct: 228  SKGRPSSSATAPPKGLGMQLNKTQKANQFLESLKAEGEVIL 268


>ref|XP_002276172.2| PREDICTED: coatomer subunit delta [Vitis vinifera]
          Length = 508

 Score =  360 bits (925), Expect(2) = e-106
 Identities = 186/270 (68%), Positives = 219/270 (81%), Gaps = 2/270 (0%)
 Frame = -1

Query: 1123 AEGEVILEDVLLNPCQYKSVALP-SDPIILTVEEKLNVSLKRNGGMSNFDVQGALWLKIL 947
            AEGEVILEDV       +S A P +DPI L+ EE+LNV+LKR+GG+SNFDVQG L L+IL
Sbjct: 239  AEGEVILEDVHPKAGPTRSAAPPLTDPITLSAEERLNVTLKRDGGVSNFDVQGTLSLQIL 298

Query: 946  NEKDGLLLIQVKTPEDPGIHFRTHPNINKELFTKLNVLGLKDPDRPFPTDRDS-VAGICL 770
            N++DGL+ +Q++T  +PGI F+THPNINKELF+  N+LGLKDP+RPFPT +    AG+ L
Sbjct: 299  NQEDGLIQVQIETGSNPGILFKTHPNINKELFSNENILGLKDPNRPFPTGQGGDAAGVGL 358

Query: 769  LKWTMQSVDEVMVPLTINCWASSLRNETFVSLEYEASPMTDLQKVVISIPLPALREAPNV 590
            LKW MQSVDE  VPLTINCW S   NET+VS+EYEAS M DL+ VVIS+PLPALREAPNV
Sbjct: 359  LKWRMQSVDESDVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPNV 418

Query: 589  RRVDGELRYNSQNSILEWSISLIDKSNRSGSMEFVVPPADSSVFFPISASFTATRTFSDL 410
            R++DGE RY+S+NSILEWSI LID SNRSGSMEFVVPPADSSVFFPIS  FTA +TFSDL
Sbjct: 419  RQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDL 478

Query: 409  KVVDILSLHGGHSPTFSQSTQLITGRYEVV 320
            KVV++L L GG  P FSQ T LIT  Y+VV
Sbjct: 479  KVVNVLPLRGGPPPKFSQRTTLITENYQVV 508



 Score = 53.5 bits (127), Expect(2) = e-106
 Identities = 29/41 (70%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = -3

Query: 1289 SKGCPPEFVTAPLKG-GMQLGKTNKTNKFLESLRAEGEVIL 1170
            SKG P    TAP KG GMQL KT K N+FLESL+AEGEVIL
Sbjct: 205  SKGRPSSSATAPPKGLGMQLNKTQKANQFLESLKAEGEVIL 245


>ref|XP_004156581.1| PREDICTED: coatomer subunit delta-like [Cucumis sativus]
          Length = 530

 Score =  357 bits (917), Expect(2) = e-106
 Identities = 181/269 (67%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
 Frame = -1

Query: 1123 AEGEVILEDVLLNPCQYKSVALP-SDPIILTVEEKLNVSLKRNGGMSNFDVQGALWLKIL 947
            AEGEVI+EDV  +    KS A P +DP+ L+VEEKLNVSLKR+GG+SNFD+QG + L+IL
Sbjct: 262  AEGEVIVEDVQPSVGLSKSAAPPPTDPVTLSVEEKLNVSLKRDGGVSNFDLQGTMSLQIL 321

Query: 946  NEKDGLLLIQVKTPEDPGIHFRTHPNINKELFTKLNVLGLKDPDRPFPTDRDSVAGICLL 767
            N++D  + +Q++T  +PGI F+THPN+NKELF+  N+LGLKDP+RPFPT + S AG+ LL
Sbjct: 322  NQEDAHIQVQIETGGNPGILFKTHPNMNKELFSNENILGLKDPNRPFPTGQGSDAGVGLL 381

Query: 766  KWTMQSVDEVMVPLTINCWASSLRNETFVSLEYEASPMTDLQKVVISIPLPALREAPNVR 587
            KW MQS DE MVPLTINCW S   NET+VS+EYEAS M DL+ VVIS+PLPALREAP+VR
Sbjct: 382  KWRMQSTDESMVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPSVR 441

Query: 586  RVDGELRYNSQNSILEWSISLIDKSNRSGSMEFVVPPADSSVFFPISASFTATRTFSDLK 407
            ++DGE RY+S+NS+LEWSI LID SNRSGSMEFVVPPADSSVFFPIS  F+AT TFS+LK
Sbjct: 442  QIDGEWRYDSRNSVLEWSIVLIDNSNRSGSMEFVVPPADSSVFFPISVRFSATSTFSELK 501

Query: 406  VVDILSLHGGHSPTFSQSTQLITGRYEVV 320
            VV+IL L GG  P ++Q TQLIT  Y+VV
Sbjct: 502  VVNILPLRGGAPPRYAQRTQLITENYQVV 530



 Score = 55.5 bits (132), Expect(2) = e-106
 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 1286 KGCPPEFVTAPLKG-GMQLGKTNKTNKFLESLRAEGEVIL 1170
            KG PP   TAP KG GMQLGK+ +TN+FLESL+AEGEVI+
Sbjct: 229  KGRPPSSATAPPKGLGMQLGKSQRTNQFLESLKAEGEVIV 268


>ref|XP_004137761.1| PREDICTED: coatomer subunit delta-like [Cucumis sativus]
          Length = 530

 Score =  357 bits (917), Expect(2) = e-106
 Identities = 181/269 (67%), Positives = 221/269 (82%), Gaps = 1/269 (0%)
 Frame = -1

Query: 1123 AEGEVILEDVLLNPCQYKSVALP-SDPIILTVEEKLNVSLKRNGGMSNFDVQGALWLKIL 947
            AEGEVI+EDV  +    KS A P +DP+ L+VEEKLNVSLKR+GG+SNFD+QG + L+IL
Sbjct: 262  AEGEVIVEDVQPSVGLSKSAAPPPTDPVTLSVEEKLNVSLKRDGGVSNFDLQGTMSLQIL 321

Query: 946  NEKDGLLLIQVKTPEDPGIHFRTHPNINKELFTKLNVLGLKDPDRPFPTDRDSVAGICLL 767
            N++D  + +Q++T  +PGI F+THPN+NKELF+  N+LGLKDP+RPFPT + S AG+ LL
Sbjct: 322  NQEDAHIQVQIETGGNPGILFKTHPNMNKELFSNENILGLKDPNRPFPTGQGSDAGVGLL 381

Query: 766  KWTMQSVDEVMVPLTINCWASSLRNETFVSLEYEASPMTDLQKVVISIPLPALREAPNVR 587
            KW MQS DE MVPLTINCW S   NET+VS+EYEAS M DL+ VVIS+PLPALREAP+VR
Sbjct: 382  KWRMQSTDESMVPLTINCWPSVSGNETYVSIEYEASSMFDLRNVVISVPLPALREAPSVR 441

Query: 586  RVDGELRYNSQNSILEWSISLIDKSNRSGSMEFVVPPADSSVFFPISASFTATRTFSDLK 407
            ++DGE RY+S+NS+LEWSI LID SNRSGSMEFVVPPADSSVFFPIS  F+AT TFS+LK
Sbjct: 442  QIDGEWRYDSRNSVLEWSIVLIDNSNRSGSMEFVVPPADSSVFFPISVRFSATSTFSELK 501

Query: 406  VVDILSLHGGHSPTFSQSTQLITGRYEVV 320
            VV+IL L GG  P ++Q TQLIT  Y+VV
Sbjct: 502  VVNILPLRGGAPPRYAQRTQLITENYQVV 530



 Score = 55.5 bits (132), Expect(2) = e-106
 Identities = 28/40 (70%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -3

Query: 1286 KGCPPEFVTAPLKG-GMQLGKTNKTNKFLESLRAEGEVIL 1170
            KG PP   TAP KG GMQLGK+ +TN+FLESL+AEGEVI+
Sbjct: 229  KGRPPSSATAPPKGLGMQLGKSQRTNQFLESLKAEGEVIV 268


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