BLASTX nr result

ID: Coptis23_contig00002950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002950
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271011.1| PREDICTED: protein EXECUTER 1, chloroplastic...   244   3e-62
ref|XP_002532765.1| EXECUTER1 protein, chloroplast precursor, pu...   231   2e-58
ref|XP_002323934.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
ref|NP_567929.1| protein EXECUTER 1 [Arabidopsis thaliana] gi|30...   213   8e-53
ref|XP_003528395.1| PREDICTED: protein EXECUTER 1, chloroplastic...   209   1e-51

>ref|XP_002271011.1| PREDICTED: protein EXECUTER 1, chloroplastic [Vitis vinifera]
            gi|296088775|emb|CBI38225.3| unnamed protein product
            [Vitis vinifera]
          Length = 702

 Score =  244 bits (623), Expect = 3e-62
 Identities = 157/404 (38%), Positives = 208/404 (51%), Gaps = 15/404 (3%)
 Frame = -1

Query: 1182 RHFPPLKKSS--------FHSHRVC-YDTSFLCRCSSYEGTSGNNNDKTWNSQFGDVVKS 1030
            RH PPLK           F SH +     S +CRC  + G     +D  W+S     +K+
Sbjct: 35   RHPPPLKPQPQPPPSPTLFCSHTLSRLSDSVVCRCHGH-GNLPPGDDFRWDSAIKQFLKN 93

Query: 1029 VVKKIEDYLNKSNDV---GVSLXXXXXXXXXXXXXXXXXXXERWKKHFVQVEEQEKIVSV 859
             +K+ + Y+N   +    G S                    +RW+KHF +V+EQE+IVS+
Sbjct: 94   AIKRFDSYVNSYRNGAKDGRSCVDVAERGNEAAEEDKEWDWDRWRKHFSEVDEQERIVSI 153

Query: 858  LKSQLGDAVYREEYEYXXXXXXXXXXXXANDTLGRVINHFNRAIEEGRYQDAAFYRDHAG 679
            LKSQLG AV +E+YE              NDT+GRV++  NRAI E RY DAAF RD AG
Sbjct: 154  LKSQLGHAVKKEDYEDAARLKVAIAAAATNDTVGRVMSLLNRAIAEERYDDAAFIRDSAG 213

Query: 678  AGLMGWWAGISEDSDDPYGRIICIGVEHGRYVARSFSPRHLATAAPGVPLFEIFITMGSK 499
            AGL+GWWAGIS+D++DPYGRI+ I  EHGRYVARS+SPR LATA  G PLFEIF+T   +
Sbjct: 214  AGLVGWWAGISDDNNDPYGRIVRISAEHGRYVARSYSPRQLATATVGAPLFEIFLTTNKR 273

Query: 498  GEYKQQAVYLKRNGGKSTDSAPSSRLLDPSSNTSQLN---GSTDAKNERSAXXXXXXXXX 328
            GEY+QQAVYLKR G     S  SS+    +SN + L+   G +D     ++         
Sbjct: 274  GEYRQQAVYLKRGGLSQDLSTMSSKSSGSTSNLNPLDLAEGKSDLL--ATSIEDSEDEDR 331

Query: 327  XXXXDMAEGLAGSQNILQDMXXXXXXXXXXXXXPGDIDKDLISXXXXXXXXXXXXXXXXX 148
                D AEGL+G +NIL+DM             PG +D+DLIS                 
Sbjct: 332  DGDSDAAEGLSGFRNILRDMIPGVKVKVLKVTAPGKVDRDLIS----------------- 374

Query: 147  XXXXXXXXXXXXXXXXXXXXDTDDDNVVKAENHQDEDEIEVDAG 16
                                  + +  VK E+ Q++DEIE++AG
Sbjct: 375  -KVIEQIMEEEEDEQDIELESVETEEEVKVESDQEQDEIEMEAG 417


>ref|XP_002532765.1| EXECUTER1 protein, chloroplast precursor, putative [Ricinus communis]
            gi|223527494|gb|EEF29622.1| EXECUTER1 protein,
            chloroplast precursor, putative [Ricinus communis]
          Length = 675

 Score =  231 bits (590), Expect = 2e-58
 Identities = 142/333 (42%), Positives = 183/333 (54%), Gaps = 5/333 (1%)
 Frame = -1

Query: 1182 RHFPPLKKSSFHSHRVCYDTSFLCRCSSY--EGTSGNNNDKTWNSQFGDVVKSVVKKIED 1009
            R F P   SS       Y T  LCRCS+   + +S ++    WN+ F  V+ S +KKIE 
Sbjct: 24   RQFYPSSTSSS-----IYSTPSLCRCSTNASDDSSSSSIQWPWNAPFQGVIGSAMKKIES 78

Query: 1008 YLNKSNDVGVSLXXXXXXXXXXXXXXXXXXXERWKKHFVQVEEQEKIVSVLKSQLGDAVY 829
            + N  N+                        +RW+KHF +V++QE+IV+VLKSQLG AV 
Sbjct: 79   FFN--NNDKKEEHSGNNREKDEISEEDNWDWDRWRKHFDEVDDQERIVTVLKSQLGHAVN 136

Query: 828  REEYEYXXXXXXXXXXXXANDTLGRVINHFNRAIEEGRYQDAAFYRDHAGAGLMGWWAGI 649
            RE+YE              ND +GRV++  NRA+ E RYQDAA  RD+AGAGL+GWW+G+
Sbjct: 137  REDYEDAARLKVAIAAAATNDVVGRVMSQLNRAVAEERYQDAALLRDNAGAGLVGWWSGM 196

Query: 648  SEDSDDPYGRIICIGVEHGRYVARSFSPRHLATAAPGVPLFEIFITMGSKGEYKQQAVYL 469
            SED  DPYG II I  EHGR+VARS+SPR LATAA G P+FEIF+T   KG++KQQAVYL
Sbjct: 197  SEDEHDPYGLIIRITAEHGRFVARSYSPRQLATAAVGSPVFEIFLTKNKKGDFKQQAVYL 256

Query: 468  KRNGGKSTDSAPSSRLLDPSSNTSQLNGSTDAKNER---SAXXXXXXXXXXXXXDMAEGL 298
            KR G     S  SS+     S  +   G T+ K++    S              D+AEGL
Sbjct: 257  KRKGLSQDPSTVSSKAPGAPSRMNP-PGPTEEKSDLFVVSTEDTDDGDETEDGSDIAEGL 315

Query: 297  AGSQNILQDMXXXXXXXXXXXXXPGDIDKDLIS 199
             G QNIL+DM                +D+D IS
Sbjct: 316  PGFQNILRDMVPGVKVKVLKVTTSSKVDRDFIS 348


>ref|XP_002323934.1| predicted protein [Populus trichocarpa] gi|222866936|gb|EEF04067.1|
            predicted protein [Populus trichocarpa]
          Length = 677

 Score =  231 bits (588), Expect = 4e-58
 Identities = 151/376 (40%), Positives = 197/376 (52%), Gaps = 7/376 (1%)
 Frame = -1

Query: 1122 SFLCRCSSYEGTSGNNNDKTWNSQFGDVVKSVVKKIEDYLN--KSNDVGVSLXXXXXXXX 949
            S LCRC+  E ++  +    W++    V K+ +K  + Y+N  K       +        
Sbjct: 42   STLCRCT--ESSNNPSIQWRWDAALQAVFKNAIKSFDSYMNPTKKGVGNKGVMEGETGEE 99

Query: 948  XXXXXXXXXXXERWKKHFVQVEEQEKIVSVLKSQLGDAVYREEYEYXXXXXXXXXXXXAN 769
                       +RW+ HF QV+EQ+++VS+LKSQLG+AV RE+YE             +N
Sbjct: 100  EEEDDGTVWDWDRWRLHFDQVDEQQRLVSLLKSQLGNAVNREDYEDAARLKVAIAAAASN 159

Query: 768  DTLGRVINHFNRAIEEGRYQDAAFYRDHAGAGLMGWWAGISEDSDDPYGRIICIGVEHGR 589
            DT+GRV++  NRA+ + RY +AAF RD+AGAGL+GWW+GISED DDPYG II I  EHGR
Sbjct: 160  DTVGRVMSQLNRALAQERYLEAAFLRDNAGAGLVGWWSGISEDVDDPYGLIIRITAEHGR 219

Query: 588  YVARSFSPRHLATAAPGVPLFEIFITMGSKGEYKQQAVYLKRNGGKSTDSAPSSRLLDPS 409
            YVARS+SPR LATAA GVPLFEIF+T   KGEY +QAVYLKR G       PS+     S
Sbjct: 220  YVARSYSPRQLATAAVGVPLFEIFLTTNKKGEYNEQAVYLKRKG---LFQDPSTLPSKAS 276

Query: 408  SNTSQLN--GSTDAKNER---SAXXXXXXXXXXXXXDMAEGLAGSQNILQDMXXXXXXXX 244
              TS+LN  G T+ K++    S              D+AEGL G QNIL+DM        
Sbjct: 277  GATSRLNPPGPTEDKSDLFVVSTEEVDDADDTEDGSDLAEGLPGFQNILRDMVPGVKVKV 336

Query: 243  XXXXXPGDIDKDLISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTDDDNVV 64
                 P  +DKD IS                                     + +DD   
Sbjct: 337  LKVTTPAKVDKDFIS----------------KVIEQIIDEEDDEKDIELESEEAEDDG-- 378

Query: 63   KAENHQDEDEIEVDAG 16
            K E+ Q+ DEIE+DAG
Sbjct: 379  KGESDQERDEIEMDAG 394


>ref|NP_567929.1| protein EXECUTER 1 [Arabidopsis thaliana]
            gi|30689758|ref|NP_849488.1| protein EXECUTER 1
            [Arabidopsis thaliana]
            gi|56404652|sp|Q93YW0.1|EXEC1_ARATH RecName: Full=Protein
            EXECUTER 1, chloroplastic; Flags: Precursor
            gi|16604595|gb|AAL24154.1| unknown protein [Arabidopsis
            thaliana] gi|21436095|gb|AAM51248.1| unknown protein
            [Arabidopsis thaliana] gi|332660857|gb|AEE86257.1|
            protein EXECUTER 1 [Arabidopsis thaliana]
            gi|332660858|gb|AEE86258.1| protein EXECUTER 1
            [Arabidopsis thaliana]
          Length = 684

 Score =  213 bits (542), Expect = 8e-53
 Identities = 132/339 (38%), Positives = 179/339 (52%), Gaps = 10/339 (2%)
 Frame = -1

Query: 1185 SRHFPPLKKSSFHSHRVCYDTSFLCRCSSYEGT-----SGNNNDKTWNSQFGDVVKSVVK 1021
            S    P  K SF+ HR+  D + LCRCSS  G+     S ++++  W+S   DV+KS +K
Sbjct: 22   SSRLTPSSKRSFYPHRLP-DPTALCRCSSSSGSNSSSSSSSDDNPRWDSAIQDVLKSAIK 80

Query: 1020 KIED----YLNKSNDVGVSLXXXXXXXXXXXXXXXXXXXERWKKHFVQVEEQEKIVSVLK 853
            + +     Y    ND G                      +RWKKHF QV++Q++++SVLK
Sbjct: 81   RFDSVLSWYATLDNDDGEQ------GSENVEKIDDDWDWDRWKKHFDQVDDQDRLLSVLK 134

Query: 852  SQLGDAVYREEYEYXXXXXXXXXXXXANDTLGRVINHFNRAIEEGRYQDAAFYRDHAGAG 673
            SQL  A+ RE+YE              ND +G+V++ F RA+ E RY+DA + RD AGAG
Sbjct: 135  SQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYKDAVYLRDKAGAG 194

Query: 672  LMGWWAGISEDSDDPYGRIICIGVEHGRYVARSFSPRHLATAAPGVPLFEIFITMGSKGE 493
            L+GWW+GISED  DP+G I+ I  EHGRYVARS++PR L+T+A G PLFEIF+T+  KG 
Sbjct: 195  LVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNPRQLSTSAAGAPLFEIFLTLDGKGN 254

Query: 492  YKQQAVYLKRNGGKSTDSAPSSRLLDPSSNTSQLNGSTDAKN-ERSAXXXXXXXXXXXXX 316
            YK+QAVYLK            SR L P    +      D  N    +             
Sbjct: 255  YKKQAVYLKWKEIFPDVPTMPSRTLTPGRFLTSPGRKEDTGNLAVESSEDEESDNSDDDS 314

Query: 315  DMAEGLAGSQNILQDMXXXXXXXXXXXXXPGDIDKDLIS 199
            D+ E  +G Q+ L+DM             PG +DKD IS
Sbjct: 315  DLLEESSGFQSFLRDMIPGVKVKVMKVTAPGRVDKDFIS 353


>ref|XP_003528395.1| PREDICTED: protein EXECUTER 1, chloroplastic-like [Glycine max]
          Length = 699

 Score =  209 bits (531), Expect = 1e-51
 Identities = 128/312 (41%), Positives = 169/312 (54%), Gaps = 9/312 (2%)
 Frame = -1

Query: 1113 CRC---SSYEGTSGNNNDKTWNS---QFGDVVKSVVKKIEDYLNKSNDVGVSLXXXXXXX 952
            CRC   +S +  SG    + W S    F +V K V    +   N  +D G          
Sbjct: 39   CRCLASASSDDRSGGGAKRGWESVLHHFSEVAKRVDSFWKSLGNADDDRG---------- 88

Query: 951  XXXXXXXXXXXXERWKKHFVQVEEQEKIVSVLKSQLGDAVYREEYEYXXXXXXXXXXXXA 772
                        +RW++HF +++EQE+++S LKSQL  AVY E+YE              
Sbjct: 89   -RGGGGDEDWDWDRWRRHFEEIDEQERLLSTLKSQLSRAVYLEDYEDAARLKVAFAAAAN 147

Query: 771  NDTLGRVINHFNRAIEEGRYQDAAFYRDHAGAGLMGWWAGISEDSDDPYGRIICIGVEHG 592
            ND++GRV+++ NRAI+E RY DAAF RD AG GL+GWWAGISE  +DP+  II I  EHG
Sbjct: 148  NDSVGRVMSYLNRAIKEERYGDAAFLRDKAGTGLVGWWAGISEGVNDPHSLIIRITPEHG 207

Query: 591  RYVARSFSPRHLATAAPGVPLFEIFITMGSKGEYKQQAVYLKRNGGKSTDSAPSSRLLDP 412
            RYVARS+SPR LAT+A G+PLFE F+TM  KGE+K QAVYL+R G        SS+ LD 
Sbjct: 208  RYVARSYSPRQLATSAAGIPLFEFFLTMDKKGEFKSQAVYLRRRGAFHGPPTNSSKTLDG 267

Query: 411  SSNTSQLNGSTDAKNER---SAXXXXXXXXXXXXXDMAEGLAGSQNILQDMXXXXXXXXX 241
            +   S +  ST+ K+E    S              D AEG+ G QN+L+DM         
Sbjct: 268  AGRLSSVE-STEDKSELYVVSTEDPENDDDRNDGSDPAEGMPGFQNVLKDMIPGVKVKVF 326

Query: 240  XXXXPGDIDKDL 205
                P  +DKD+
Sbjct: 327  KVITPDKVDKDI 338


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