BLASTX nr result

ID: Coptis23_contig00002942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002942
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Viti...   326   5e-87
emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]   326   5e-87
ref|XP_004147885.1| PREDICTED: clathrin light chain 3-like [Cucu...   254   3e-65
ref|XP_004165109.1| PREDICTED: clathrin light chain 2-like [Cucu...   254   3e-65
ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Viti...   252   1e-64

>ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Vitis vinifera]
          Length = 319

 Score =  326 bits (836), Expect = 5e-87
 Identities = 166/256 (64%), Positives = 192/256 (75%), Gaps = 19/256 (7%)
 Frame = +1

Query: 292  EDGGYIGGYDPRLPSQRFDSFTNFTDTESVKDDGDSVPIYNNNN----DGGF----IPDT 447
            +D GY+G YDPRLPSQRFDSFTNF D+ESVK+  +  PIYN+ +    D  F    IPDT
Sbjct: 27   DDDGYLG-YDPRLPSQRFDSFTNFADSESVKESVEDSPIYNSASYAAADDVFTSQPIPDT 85

Query: 448  PSPNSAYNSG---------FQSYSPELNG--IDEGFGVSDGPVLPPPVDMEPEEGFALRE 594
            PSP   Y SG         F S+SPE NG   DEGF  SDGP+LPPP +M+ EEGFALRE
Sbjct: 86   PSPPPIYVSGGGFAADQHEFSSFSPEANGKVFDEGFAGSDGPILPPPTEMQSEEGFALRE 145

Query: 595  WRRQNXXXXXXXXXXXXXXXNQIIDEAEEFKIEFYRKRTVNVETNKSSNREREKLFVANQ 774
            WRRQN               +QIIDEA+E+K+EFYR+RT+  ETNK++NRE+EKLF+ANQ
Sbjct: 146  WRRQNAITLEEKEKREKELLSQIIDEADEYKVEFYRRRTITCETNKTTNREKEKLFIANQ 205

Query: 775  AKFHAEADKNYWKTIAELIPNEVPAIEKRRGKKDQEKKPSIAVVQGPKPGKPTDLARMRH 954
             KFHAEADKNYWK IAELIPNEVPAIEK+RGKKDQ+KKPSI V+QGPKPGKPTDL+RMR 
Sbjct: 206  EKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQDKKPSIVVIQGPKPGKPTDLSRMRQ 265

Query: 955  ILLKLKHNPPTHMKTS 1002
            ILLKLKHN P H+K S
Sbjct: 266  ILLKLKHNTPPHLKPS 281


>emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]
          Length = 319

 Score =  326 bits (836), Expect = 5e-87
 Identities = 166/256 (64%), Positives = 192/256 (75%), Gaps = 19/256 (7%)
 Frame = +1

Query: 292  EDGGYIGGYDPRLPSQRFDSFTNFTDTESVKDDGDSVPIYNNNN----DGGF----IPDT 447
            +D GY+G YDPRLPSQRFDSFTNF D+ESVK+  +  PIYN+ +    D  F    IPDT
Sbjct: 27   DDDGYLG-YDPRLPSQRFDSFTNFADSESVKESVEDSPIYNSASYAAADDVFTSQPIPDT 85

Query: 448  PSPNSAYNSG---------FQSYSPELNG--IDEGFGVSDGPVLPPPVDMEPEEGFALRE 594
            PSP   Y SG         F S+SPE NG   DEGF  SDGP+LPPP +M+ EEGFALRE
Sbjct: 86   PSPPPIYVSGGGFAADQHEFSSFSPEANGKVFDEGFAGSDGPILPPPTEMQSEEGFALRE 145

Query: 595  WRRQNXXXXXXXXXXXXXXXNQIIDEAEEFKIEFYRKRTVNVETNKSSNREREKLFVANQ 774
            WRRQN               +QIIDEA+E+K+EFYR+RT+  ETNK++NRE+EKLF+ANQ
Sbjct: 146  WRRQNAITLEEKEKREKELLSQIIDEADEYKVEFYRRRTITCETNKTTNREKEKLFIANQ 205

Query: 775  AKFHAEADKNYWKTIAELIPNEVPAIEKRRGKKDQEKKPSIAVVQGPKPGKPTDLARMRH 954
             KFHAEADKNYWK IAELIPNEVPAIEK+RGKKDQ+KKPSI V+QGPKPGKPTDL+RMR 
Sbjct: 206  EKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQDKKPSIVVIQGPKPGKPTDLSRMRQ 265

Query: 955  ILLKLKHNPPTHMKTS 1002
            ILLKLKHN P H+K S
Sbjct: 266  ILLKLKHNTPPHLKPS 281


>ref|XP_004147885.1| PREDICTED: clathrin light chain 3-like [Cucumis sativus]
          Length = 290

 Score =  254 bits (649), Expect = 3e-65
 Identities = 133/242 (54%), Positives = 166/242 (68%), Gaps = 4/242 (1%)
 Frame = +1

Query: 283 PESEDGGYIGGYDPRLPSQRFDSFTNFTDTESVKDDGDSVPIYNN--NNDGGFIPDTPSP 456
           P S       G++PRL SQRF++F+ F + ES  D   S PI+ N   + G  +  TP  
Sbjct: 8   PPSPFDDATNGFEPRLASQRFETFSTF-EAESADD---SSPIFGNLPYDQGDGVEPTPPT 63

Query: 457 NSAYNSGFQSYSPELNG--IDEGFGVSDGPVLPPPVDMEPEEGFALREWRRQNXXXXXXX 630
           N +   GF S+S + NG   D GFG SDGP+L  P  MEPEEGF LREWRR N       
Sbjct: 64  NFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEK 123

Query: 631 XXXXXXXXNQIIDEAEEFKIEFYRKRTVNVETNKSSNREREKLFVANQAKFHAEADKNYW 810
                    +IIDEA+++KIEFYR+R + ++ +K++NR++EK ++ANQ KFHAEADKNYW
Sbjct: 124 EKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYW 183

Query: 811 KTIAELIPNEVPAIEKRRGKKDQEKKPSIAVVQGPKPGKPTDLARMRHILLKLKHNPPTH 990
           K IAELIPNEVP IE +RGKKD+EKKP+I V+QGPKPGKPTDL+RMR I LKLKHN P H
Sbjct: 184 KAIAELIPNEVPTIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLH 242

Query: 991 MK 996
           MK
Sbjct: 243 MK 244


>ref|XP_004165109.1| PREDICTED: clathrin light chain 2-like [Cucumis sativus]
          Length = 290

 Score =  254 bits (648), Expect = 3e-65
 Identities = 131/232 (56%), Positives = 164/232 (70%), Gaps = 4/232 (1%)
 Frame = +1

Query: 313 GYDPRLPSQRFDSFTNFTDTESVKDDGDSVPIYNN--NNDGGFIPDTPSPNSAYNSGFQS 486
           G++PRL SQRF++F+ F + ES  D   S PI+ N   + G  +  TP  N +   GF S
Sbjct: 18  GFEPRLASQRFETFSTF-EAESADD---SSPIFGNLPYDQGDGVEPTPPTNFSAGGGFSS 73

Query: 487 YSPELNG--IDEGFGVSDGPVLPPPVDMEPEEGFALREWRRQNXXXXXXXXXXXXXXXNQ 660
           +S + NG   D GFG SDGP+L  P  MEPEEGF LREWRR N                +
Sbjct: 74  FSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFPLREWRRLNAIRLEEKEKREMELLEE 133

Query: 661 IIDEAEEFKIEFYRKRTVNVETNKSSNREREKLFVANQAKFHAEADKNYWKTIAELIPNE 840
           IIDEA+++KIEFYR+R + ++ +K++NR++EK ++ANQ KFHAEADKNYWK IAELIPNE
Sbjct: 134 IIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYLANQEKFHAEADKNYWKAIAELIPNE 193

Query: 841 VPAIEKRRGKKDQEKKPSIAVVQGPKPGKPTDLARMRHILLKLKHNPPTHMK 996
           VP IE +RGKKD+EKKP+I V+QGPKPGKPTDL+RMR I LKLKHN P HMK
Sbjct: 194 VPTIE-QRGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMK 244


>ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Vitis vinifera]
          Length = 375

 Score =  252 bits (643), Expect = 1e-64
 Identities = 135/256 (52%), Positives = 165/256 (64%), Gaps = 30/256 (11%)
 Frame = +1

Query: 316 YDPRLPSQRFDSFTNFTDTESVKDDG----------DSVPI--YNNNNDG--------GF 435
           YDP LPS+RFDS+ +F   +    D           D V +   ++N DG        GF
Sbjct: 30  YDPSLPSRRFDSYASFATADDYAADDAPPAGGFPVEDEVTVDHVSHNVDGVHPLPGMYGF 89

Query: 436 ----IPDTPSPNSAYNS------GFQSYSPELNGIDEGFGVSDGPVLPPPVDMEPEEGFA 585
               + D P+PN + +S             +++  +E    SDGPVLPPP +M+PEEGF 
Sbjct: 90  EGSSMADDPNPNFSEDSFSVPIANGNGKPYDISADNEDIFSSDGPVLPPPTEMQPEEGFI 149

Query: 586 LREWRRQNXXXXXXXXXXXXXXXNQIIDEAEEFKIEFYRKRTVNVETNKSSNREREKLFV 765
           LREWRRQN               NQII+EAEE+K  FY KR VN+ETNK++NREREKL++
Sbjct: 150 LREWRRQNAIQLEEKEKREKEMRNQIIEEAEEYKRAFYEKRKVNIETNKTNNREREKLYL 209

Query: 766 ANQAKFHAEADKNYWKTIAELIPNEVPAIEKRRGKKDQEKKPSIAVVQGPKPGKPTDLAR 945
           ANQ KFH EADK YWK IAELIP+EVP IEK+RGKKD +KKPSI V+QGPKPGKPTDL+R
Sbjct: 210 ANQEKFHKEADKQYWKAIAELIPHEVPNIEKKRGKKDPDKKPSITVIQGPKPGKPTDLSR 269

Query: 946 MRHILLKLKHNPPTHM 993
           MRHIL+KLKH PP HM
Sbjct: 270 MRHILVKLKHTPPPHM 285


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