BLASTX nr result

ID: Coptis23_contig00002941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002941
         (1129 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525289.1| PREDICTED: uncharacterized oxidoreductase yk...   446   e-123
ref|XP_004141022.1| PREDICTED: uncharacterized oxidoreductase Yk...   444   e-122
ref|XP_002324452.1| predicted protein [Populus trichocarpa] gi|2...   444   e-122
ref|XP_003630708.1| Oxidoreductase, putative [Medicago truncatul...   442   e-122
ref|XP_003530536.1| PREDICTED: uncharacterized oxidoreductase yk...   440   e-121

>ref|XP_003525289.1| PREDICTED: uncharacterized oxidoreductase ykwC-like [Glycine max]
          Length = 310

 Score =  446 bits (1147), Expect = e-123
 Identities = 229/297 (77%), Positives = 252/297 (84%), Gaps = 1/297 (0%)
 Frame = -1

Query: 1024 MNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHSPSDVAA 845
            ++P+NTRVGWIGTGVMG+SMC+HLI+AGY LT+F RT SKAQPL+D+GA F  SP  VAA
Sbjct: 8    ISPSNTRVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDLGAYFAPSPHAVAA 67

Query: 844  RSDVVFSIVGYPSDVRAVLIGPS-GALNGLREGGILVDMTTSDPSLAVEISSAADAKNCA 668
            RSDVVFSIVGYPSDVR+VL+ PS GAL+ LR GG+LVDMTTS+PSLAVEI+ AA AK C 
Sbjct: 68   RSDVVFSIVGYPSDVRSVLLHPSSGALSALRPGGVLVDMTTSEPSLAVEIADAATAKGCH 127

Query: 667  SVDAPVSGGDRGAKAGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFAKLANQI 488
            S+DAPVSGGDRGAK GTLAIFAGG+E  V+R+E LFS LGKVNYMGG GKGQFAKLANQ+
Sbjct: 128  SIDAPVSGGDRGAKNGTLAIFAGGEESTVKRMEALFSHLGKVNYMGGSGKGQFAKLANQV 187

Query: 487  TIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEAGFYVNH 308
            TIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSLDLYG RIL RD E GF+VNH
Sbjct: 188  TIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGKRILNRDLEPGFFVNH 247

Query: 307  FVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNNVSL 137
            FVKDLGICLKECQNM                  AHGEGNLGTQALIL LERLNNV+L
Sbjct: 248  FVKDLGICLKECQNMGIALPGLALAQQLYVSLRAHGEGNLGTQALILVLERLNNVTL 304


>ref|XP_004141022.1| PREDICTED: uncharacterized oxidoreductase YkwC-like [Cucumis sativus]
            gi|449487969|ref|XP_004157891.1| PREDICTED:
            uncharacterized oxidoreductase YkwC-like [Cucumis
            sativus]
          Length = 310

 Score =  444 bits (1141), Expect = e-122
 Identities = 231/308 (75%), Positives = 256/308 (83%), Gaps = 1/308 (0%)
 Frame = -1

Query: 1042 STTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHS 863
            ST+ D+++P+ TRVGWIGTGVMG SMCSH+IKAGY LT+F RT SKAQPL+D+GA    S
Sbjct: 2    STSGDIVSPSTTRVGWIGTGVMGCSMCSHIIKAGYKLTVFNRTISKAQPLLDLGANLATS 61

Query: 862  PSDVAARSDVVFSIVGYPSDVRAVLIGPS-GALNGLREGGILVDMTTSDPSLAVEISSAA 686
            P  VAA+SDVVFSIVGYPSDVR+VL+ PS GAL GLR GG+L+DMTTS+PSLA EI+++A
Sbjct: 62   PLAVAAQSDVVFSIVGYPSDVRSVLLDPSSGALAGLRPGGVLIDMTTSEPSLASEIAASA 121

Query: 685  DAKNCASVDAPVSGGDRGAKAGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFA 506
             AK C ++DAPVSGGDRGAK  TLAIFAGGDE  V+RL PLFS LGKVNYMG  GKGQFA
Sbjct: 122  TAKGCGAIDAPVSGGDRGAKNATLAIFAGGDEDEVQRLSPLFSLLGKVNYMGESGKGQFA 181

Query: 505  KLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEA 326
            KLANQITIASTMVGLVEGM+YA KAGLDVGL+LNAISTGAAGSKSLDLYGSRIL RDFE 
Sbjct: 182  KLANQITIASTMVGLVEGMIYAKKAGLDVGLFLNAISTGAAGSKSLDLYGSRILKRDFEP 241

Query: 325  GFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNN 146
            GF+VNHFVKDLGICLKECQNM                  A+GEGNLGTQALILSLERLNN
Sbjct: 242  GFFVNHFVKDLGICLKECQNMGLALPGLALAQQLYVSLKAYGEGNLGTQALILSLERLNN 301

Query: 145  VSLESKPS 122
            VSLE   S
Sbjct: 302  VSLEGSGS 309


>ref|XP_002324452.1| predicted protein [Populus trichocarpa] gi|222865886|gb|EEF03017.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  444 bits (1141), Expect = e-122
 Identities = 229/315 (72%), Positives = 259/315 (82%), Gaps = 1/315 (0%)
 Frame = -1

Query: 1072 LFFNKIRCSESTTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPL 893
            L    +  + +T  + ++P+NTRVGWIGTGVMGRSMC HLIKAGY +T+F RT SKAQPL
Sbjct: 1    LLHRTMAAAATTNVEPISPSNTRVGWIGTGVMGRSMCGHLIKAGYKVTVFNRTLSKAQPL 60

Query: 892  IDMGAQFVHSPSDVAARSDVVFSIVGYPSDVRAVLI-GPSGALNGLREGGILVDMTTSDP 716
            IDMGA+   SP  VA++SDVVFSIVG+PSDVR+VL+   SGAL GLR GG+LVDMTTS+P
Sbjct: 61   IDMGARLAQSPLAVASQSDVVFSIVGFPSDVRSVLLDSTSGALPGLRPGGVLVDMTTSEP 120

Query: 715  SLAVEISSAADAKNCASVDAPVSGGDRGAKAGTLAIFAGGDELVVRRLEPLFSCLGKVNY 536
            SLA EIS+AA  K+C SVDAPVSGGDRGAK G+LAIFAGGD+ V+ RL PLF+ +G+VNY
Sbjct: 121  SLAAEISAAATIKDCHSVDAPVSGGDRGAKNGSLAIFAGGDKTVIDRLSPLFALMGRVNY 180

Query: 535  MGGPGKGQFAKLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYG 356
            MG  GKGQFAKLANQITIASTMVGLVEG++YAHKAGL+V  YLNAISTGAAGSKSLDLYG
Sbjct: 181  MGATGKGQFAKLANQITIASTMVGLVEGIIYAHKAGLNVESYLNAISTGAAGSKSLDLYG 240

Query: 355  SRILGRDFEAGFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQA 176
            SRIL RDFEAGFYVNHFVKDLGICLKECQNM                  AHGEGNLGTQA
Sbjct: 241  SRILKRDFEAGFYVNHFVKDLGICLKECQNMGLALPGLALAQQLYLSLKAHGEGNLGTQA 300

Query: 175  LILSLERLNNVSLES 131
            LIL+LERLNNVSLE+
Sbjct: 301  LILALERLNNVSLEN 315


>ref|XP_003630708.1| Oxidoreductase, putative [Medicago truncatula]
            gi|355524730|gb|AET05184.1| Oxidoreductase, putative
            [Medicago truncatula]
          Length = 343

 Score =  442 bits (1137), Expect = e-122
 Identities = 229/307 (74%), Positives = 256/307 (83%), Gaps = 1/307 (0%)
 Frame = -1

Query: 1036 TTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHSPS 857
            T++ + P+NTR+GWIGTGVMG+SMC+HLI++GY LT+F RT SKAQPL+D+GA    SP 
Sbjct: 3    TSEPITPSNTRLGWIGTGVMGQSMCAHLIRSGYTLTVFNRTPSKAQPLLDIGATLATSPH 62

Query: 856  DVAARSDVVFSIVGYPSDVRAVLIGPS-GALNGLREGGILVDMTTSDPSLAVEISSAADA 680
             VA++SDVVFSIVGYPSDVR+VL+ P+ GAL GL+ GGILVDMTTSDPSLAVEI+ AA  
Sbjct: 63   AVASQSDVVFSIVGYPSDVRSVLLDPNTGALAGLKSGGILVDMTTSDPSLAVEIADAASV 122

Query: 679  KNCASVDAPVSGGDRGAKAGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFAKL 500
            K+C S+DAPVSGGDRGAK GTLAIFAGGDE +V++L PLFS LGKVNYMG  GKGQF KL
Sbjct: 123  KSCHSIDAPVSGGDRGAKNGTLAIFAGGDESIVKKLSPLFSSLGKVNYMGTSGKGQFVKL 182

Query: 499  ANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEAGF 320
            ANQITIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSL+LYG RIL RDFEAGF
Sbjct: 183  ANQITIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLELYGKRILKRDFEAGF 242

Query: 319  YVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNNVS 140
            YVNHFVKDLGICLKEC+ M                  AHGEGNLGTQALIL LERLNNVS
Sbjct: 243  YVNHFVKDLGICLKECEKMGIALPGLALAQQLYVSLKAHGEGNLGTQALILVLERLNNVS 302

Query: 139  LESKPSV 119
            L   PSV
Sbjct: 303  L--PPSV 307


>ref|XP_003530536.1| PREDICTED: uncharacterized oxidoreductase ykwC-like [Glycine max]
          Length = 309

 Score =  440 bits (1132), Expect = e-121
 Identities = 225/298 (75%), Positives = 251/298 (84%), Gaps = 1/298 (0%)
 Frame = -1

Query: 1027 LMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHSPSDVA 848
            +++ +NTRVGWIGTGVMG+SMC+HLI+AGY LT+F RT SKAQPL+D+GA F  SP  VA
Sbjct: 7    IISSSNTRVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDLGAHFAPSPHAVA 66

Query: 847  ARSDVVFSIVGYPSDVRAVLIGPS-GALNGLREGGILVDMTTSDPSLAVEISSAADAKNC 671
            A SDVVF+IVGYPSDVR+VL+ PS GAL+ LR GG+LVDMTTS+PSLA EI++AA AK C
Sbjct: 67   ANSDVVFTIVGYPSDVRSVLLHPSSGALSALRPGGVLVDMTTSEPSLATEIAAAAAAKGC 126

Query: 670  ASVDAPVSGGDRGAKAGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFAKLANQ 491
             S+DAPVSGGDRGAK GTLAIFAGG+E  V+RLEPLFS LGKV YMGG GKGQFAKLANQ
Sbjct: 127  HSIDAPVSGGDRGAKNGTLAIFAGGEEATVKRLEPLFSHLGKVKYMGGSGKGQFAKLANQ 186

Query: 490  ITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEAGFYVN 311
            +TIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSLDLYG RIL RD + GF+VN
Sbjct: 187  VTIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGKRILNRDLDPGFFVN 246

Query: 310  HFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNNVSL 137
            HFVKDLGICLKECQNM                  AHGEGNLGTQALIL LERLNNV+L
Sbjct: 247  HFVKDLGICLKECQNMGIALPGLALAQQLYVSLRAHGEGNLGTQALILVLERLNNVTL 304


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