BLASTX nr result
ID: Coptis23_contig00002939
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002939
(2198 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD... 530 e-148
emb|CBI17339.3| unnamed protein product [Vitis vinifera] 530 e-148
ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|2... 493 e-137
ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicag... 486 e-134
emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera] 485 e-134
>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
Length = 1013
Score = 530 bits (1366), Expect = e-148
Identities = 283/482 (58%), Positives = 346/482 (71%), Gaps = 11/482 (2%)
Frame = -2
Query: 2074 HVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFE 1895
++L+ITGQAGVGKSAT+H IASHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFE
Sbjct: 130 NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 189
Query: 1894 SFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINGKLGIGRLRKCLHTLVGSTQIPTVI 1715
SFVER+RKY L+P G S NG RLR CL L STQIPT I
Sbjct: 190 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 249
Query: 1714 LITEYAKSDSSNS--ATHDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNL 1541
LIT+Y K+DS+++ LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC +
Sbjct: 250 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 309
Query: 1540 EAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHP-----KDKAAVLRMPDDGG 1376
A+QID IAR SGGD+R+AITSLQYFCL P +LS + + P K+K+ L DDG
Sbjct: 310 TADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGF 369
Query: 1375 ALSFGRDETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFARLPLKMDAPEKIICQA 1196
+L FGRDETLSLFHALGKFLHNKRES N +A GQ +L+RE+ RLPLKMDAPE+++CQA
Sbjct: 370 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQA 429
Query: 1195 NGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNYELES 1016
+ +AR + DFLHENVLDFLS+EA+D+A VASYL D+D LLA +G + +YE +
Sbjct: 430 HVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRG----MLATSYEAGN 485
Query: 1015 IRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNETVRQRYEACNSVS 836
+ QSAAASVA RGVLFGNSHP SRWHAIR PK+WQVEQSS HNK E + QR A + +
Sbjct: 486 VLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVALS--T 543
Query: 835 YDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN----DEIE 668
++ V+ATEY P+ +WL+ GA + Q +Q + + D D LD EN DEIE
Sbjct: 544 SNVSVIATEYIPIFKWLRYGASGGFEDYQALIQGNETELDDNDSMILDEKENEISDDEIE 603
Query: 667 DW 662
DW
Sbjct: 604 DW 605
>emb|CBI17339.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 530 bits (1366), Expect = e-148
Identities = 283/482 (58%), Positives = 346/482 (71%), Gaps = 11/482 (2%)
Frame = -2
Query: 2074 HVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFE 1895
++L+ITGQAGVGKSAT+H IASHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFE
Sbjct: 130 NLLVITGQAGVGKSATIHAIASHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 189
Query: 1894 SFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINGKLGIGRLRKCLHTLVGSTQIPTVI 1715
SFVER+RKY L+P G S NG RLR CL L STQIPT I
Sbjct: 190 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 249
Query: 1714 LITEYAKSDSSNS--ATHDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNL 1541
LIT+Y K+DS+++ LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC +
Sbjct: 250 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 309
Query: 1540 EAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHP-----KDKAAVLRMPDDGG 1376
A+QID IAR SGGD+R+AITSLQYFCL P +LS + + P K+K+ L DDG
Sbjct: 310 TADQIDLIARSSGGDVRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKSDELNPLDDGF 369
Query: 1375 ALSFGRDETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFARLPLKMDAPEKIICQA 1196
+L FGRDETLSLFHALGKFLHNKRES N +A GQ +L+RE+ RLPLKMDAPE+++CQA
Sbjct: 370 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLTRLPLKMDAPERVLCQA 429
Query: 1195 NGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNYELES 1016
+ +AR + DFLHENVLDFLS+EA+D+A VASYL D+D LLA +G + +YE +
Sbjct: 430 HVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRG----MLATSYEAGN 485
Query: 1015 IRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNETVRQRYEACNSVS 836
+ QSAAASVA RGVLFGNSHP SRWHAIR PK+WQVEQSS HNK E + QR A + +
Sbjct: 486 VLQSAAASVAARGVLFGNSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVALS--T 543
Query: 835 YDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN----DEIE 668
++ V+ATEY P+ +WL+ GA + Q +Q + + D D LD EN DEIE
Sbjct: 544 SNVSVIATEYIPIFKWLRYGASGGFEDYQALIQGNETELDDNDSMILDEKENEISDDEIE 603
Query: 667 DW 662
DW
Sbjct: 604 DW 605
>ref|XP_002327648.1| predicted protein [Populus trichocarpa] gi|222836733|gb|EEE75126.1|
predicted protein [Populus trichocarpa]
Length = 613
Score = 493 bits (1270), Expect = e-137
Identities = 265/482 (54%), Positives = 348/482 (72%), Gaps = 11/482 (2%)
Frame = -2
Query: 2074 HVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFE 1895
+V++I G+AGVGKS T+ VIASH GARL EWNTPTPT+WQEHV+N +G+ Y SKLDEF
Sbjct: 139 NVVVINGKAGVGKSTTIQVIASHFGARLCEWNTPTPTIWQEHVHNTNTGIQYTSKLDEFV 198
Query: 1894 SFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXI-NGKLGIGRLRKCLHTLVGSTQIPTV 1718
+F+E+IRKY L+P S V+PS + NG++ RL+ CL LV STQ+PT
Sbjct: 199 NFIEKIRKYGLIPSSS-SEDVKPSIILLIDDLPMTNGRVAFERLQSCLLHLVRSTQLPTA 257
Query: 1717 ILITEYAKSDSSNSATHDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNLE 1538
IL+++Y ++DS++ LE +Q SLENAGACK++FNP+T NSIKKTLS+ICR+EQC++
Sbjct: 258 ILVSDYDEADSADHTARRLEQLQLSLENAGACKVSFNPITNNSIKKTLSRICRQEQCSVT 317
Query: 1537 AEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHPK---DKAAVLRMPDDGGALS 1367
EQ+D IA+ SGGDIR+AITSLQ FC+ P +L+ + + P K + G +L
Sbjct: 318 DEQLDLIAKGSGGDIRHAITSLQLFCVKPDLVLNGSYSTPSYLYGKEDDIDALVSGISLL 377
Query: 1366 FGRDETLSLFHALGKFLHNKRES--VNTVASGQNQYLLREKFARLPLKMDAPEKIICQAN 1193
FGRDETLSLFHALGKFLHNKRE+ N + G + +L++E F+RLPLKMDAPEK++CQA+
Sbjct: 378 FGRDETLSLFHALGKFLHNKRETEVANAITPG-DAFLVQENFSRLPLKMDAPEKVLCQAH 436
Query: 1192 GEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNYELESI 1013
G+AR +TDFLHENVLDF+SDEA+D+AW V+SY D+D LL++F+G + E E++
Sbjct: 437 GQARPVTDFLHENVLDFISDEAMDDAWHVSSYFSDSDLLLSSFRG----MLARYNEAENV 492
Query: 1012 RQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNETVRQRYEACN-SVS 836
QSAAASVAVRGVLFGNSHP+P RWHAIR PK+WQVE+S HN+ E VRQR+ A N S S
Sbjct: 493 LQSAAASVAVRGVLFGNSHPSPPRWHAIRKPKLWQVEKSMLHNQKEIVRQRFIAYNGSSS 552
Query: 835 YDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRLDSSE----NDEIE 668
++ +ATEY PLL+WL+ A + NQ + + D + D LD E +DEIE
Sbjct: 553 CNVSDVATEYMPLLKWLEHRASGF-EDNQALVYCKKTDGESCDRMSLDDKESDISDDEIE 611
Query: 667 DW 662
+W
Sbjct: 612 EW 613
>ref|XP_003629272.1| Cell cycle checkpoint protein RAD17 [Medicago truncatula]
gi|355523294|gb|AET03748.1| Cell cycle checkpoint protein
RAD17 [Medicago truncatula]
Length = 604
Score = 486 bits (1251), Expect = e-134
Identities = 255/486 (52%), Positives = 341/486 (70%), Gaps = 7/486 (1%)
Frame = -2
Query: 2098 PTPTLWQEHVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYY 1919
P+ +++ +VL+++GQAG+GKSA +HVIASHLGA + WNTPTP +WQEH+YN + Y
Sbjct: 126 PSKGVYRNNVLVVSGQAGIGKSAAIHVIASHLGAMVCGWNTPTPVIWQEHLYNSGTETKY 185
Query: 1918 MSKLDEFESFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINGKLGIGRLRKCLHTLVG 1739
SKLDEF SFVERIR + L+P G S ++ K +GRL+ CL+ LV
Sbjct: 186 TSKLDEFVSFVERIRTFGLIPTSFTGESKPSIIYLIDDLPMMHSKAALGRLKDCLNLLVH 245
Query: 1738 STQIPTVILITEYAKSDSSNSATHDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICR 1559
+T+IPT IL+T+Y +DS++ +E++++SLE++GACK+AFNP+TVNSIKK L +IC+
Sbjct: 246 TTRIPTAILVTDYGNTDSADYNARSVEELKTSLESSGACKIAFNPITVNSIKKILFRICQ 305
Query: 1558 EEQCNLEAEQIDQIARVSGGDIRNAITSLQYFCLTPGQL--LSSNTNHPKDKAAVLRMP- 1388
EQC++ A+ +D IA+ SGGDIR+AITSLQ+FCL P Q+ LS +T P P
Sbjct: 306 MEQCDVTADNVDLIAKASGGDIRHAITSLQFFCLNPNQVHSLSQSTRSPHALKEESNKPV 365
Query: 1387 --DDGGALSFGRDETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFARLPLKMDAPE 1214
DDG +L FGRDETLSLFHALGKFLHNKRE+ V QN +L+ E+F+RLPLKMD PE
Sbjct: 366 ELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAVEYDQNGFLIHERFSRLPLKMDVPE 425
Query: 1213 KIICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTN 1034
KI+CQ++ + + DFLHENVLDFL+DEAV++AW ++SYL DAD LL +G M +
Sbjct: 426 KILCQSHVQPGPVADFLHENVLDFLNDEAVEDAWILSSYLGDADILLTKLRG-----MVS 480
Query: 1033 NY-ELESIRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNETVRQRY 857
+Y E ESI QSAAAS+AVRGVLFGNS P SRWHAIR PK+WQVE+ + KN+ +RQR
Sbjct: 481 SYNEAESILQSAAASIAVRGVLFGNSCPLSSRWHAIRRPKLWQVEKELSYQKNKMLRQRI 540
Query: 856 EACNSV-SYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQIDEDMLDCDRLDSSEN 680
ACN + SY + VMATEY P+ + L G + + + ID+ LD + ++ S+
Sbjct: 541 PACNQLSSYHMSVMATEYMPMFK-LLGNRVGSGYDELHQESNIDIDKMSLDGEAMEISD- 598
Query: 679 DEIEDW 662
D+IEDW
Sbjct: 599 DDIEDW 604
>emb|CAN62558.1| hypothetical protein VITISV_009206 [Vitis vinifera]
Length = 1125
Score = 485 bits (1248), Expect = e-134
Identities = 267/485 (55%), Positives = 335/485 (69%), Gaps = 15/485 (3%)
Frame = -2
Query: 2074 HVLLITGQAGVGKSATVHVIASHLGARLFEWNTPTPTLWQEHVYNLRSGLYYMSKLDEFE 1895
++L+ITGQAGVGKSAT+H I SHLGARL EWNTP PT+WQEH++N SG+ Y SKLDEFE
Sbjct: 211 NLLVITGQAGVGKSATIHAIVSHLGARLCEWNTPIPTIWQEHLHNTNSGIRYTSKLDEFE 270
Query: 1894 SFVERIRKYPLLPLFSIGGSVEPSXXXXXXXXXINGKLGIGRLRKCLHTLVGSTQIPTVI 1715
SFVER+RKY L+P G S NG RLR CL L STQIPT I
Sbjct: 271 SFVERMRKYGLIPPSFAGESKSSVILLIDDLPVTNGNASYRRLRNCLQLLAQSTQIPTAI 330
Query: 1714 LITEYAKSDSSN--SATHDLEDIQSSLENAGACKMAFNPLTVNSIKKTLSKICREEQCNL 1541
LIT+Y K+DS++ + LE++Q SLENAGACK+AFNP+T NSIKKTLSKICR+EQC +
Sbjct: 331 LITDYGKADSADNIATARCLEELQLSLENAGACKIAFNPITSNSIKKTLSKICRQEQCGV 390
Query: 1540 EAEQIDQIARVSGGDIRNAITSLQYFCLTPGQLLSSNTNHP-----KDKAAVLRMPDDGG 1376
A+QID IAR SGGDIR+AITSLQYFCL P +LS + + P K+K L DDG
Sbjct: 391 TADQIDLIARSSGGDIRHAITSLQYFCLKPDPMLSLSFSEPARTYSKEKXDELNPLDDGF 450
Query: 1375 ALSFGRDETLSLFHALGKFLHNKRESVNTVASGQNQYLLREKFAR-LPLKMDA---PEKI 1208
+L FGRDETLSLFHALGKFLHNKRES N +A GQ +L+RE+ + +PLKM +
Sbjct: 451 SLPFGRDETLSLFHALGKFLHNKRESENAIAPGQEAFLVRERLDKIIPLKMTVLMLQKGF 510
Query: 1207 ICQANGEARLITDFLHENVLDFLSDEAVDNAWTVASYLCDADNLLANFQGSTWSRMTNNY 1028
+ + +AR + DFLHENVLDFLS+EA+D+A VASYL D+D LLA +G + +Y
Sbjct: 511 FVKQHVQARPVVDFLHENVLDFLSEEAIDDASAVASYLSDSDFLLAAHRG----MLATSY 566
Query: 1027 ELESIRQSAAASVAVRGVLFGNSHPAPSRWHAIRSPKIWQVEQSSRHNKNETVRQRYEAC 848
E ++ QSAAASVA RGVLF NSHP SRWHAIR PK+WQVEQSS HNK E + QR A
Sbjct: 567 EAGNVLQSAAASVAARGVLFANSHPLASRWHAIRRPKLWQVEQSSLHNKCEILGQRLVAL 626
Query: 847 NSVSYDLCVMATEYKPLLRWLKGGALKHPQTNQERMQDCQID----EDMLDCDRLDSSEN 680
+ + ++ V+ATEY P+ +WL+ GA + Q +Q + + + M+ ++ + +
Sbjct: 627 S--TSNVSVIATEYIPMFKWLRYGASGGFEDYQALIQGNETELXDNDSMILXEKENEISD 684
Query: 679 DEIED 665
DEIED
Sbjct: 685 DEIED 689