BLASTX nr result

ID: Coptis23_contig00002938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002938
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516995.1| PREDICTED: syntaxin-22-like [Glycine max]         191   7e-47
ref|XP_002278649.1| PREDICTED: syntaxin-22 [Vitis vinifera] gi|1...   190   9e-47
gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]              190   1e-46
gb|ABK24740.1| unknown [Picea sitchensis] gi|148909620|gb|ABR179...   190   1e-46
ref|XP_004165583.1| PREDICTED: LOW QUALITY PROTEIN: syntaxin-22-...   189   2e-46

>ref|XP_003516995.1| PREDICTED: syntaxin-22-like [Glycine max]
          Length = 273

 Score =  191 bits (484), Expect = 7e-47
 Identities = 101/119 (84%), Positives = 108/119 (90%), Gaps = 2/119 (1%)
 Frame = -3

Query: 462 DPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRDKLQKTRLHIGRLVKDTTAKLKQ 283
           DPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELRDKL KTRLHIG+LVKDT+AKLKQ
Sbjct: 24  DPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELRDKLHKTRLHIGQLVKDTSAKLKQ 83

Query: 282 ASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS--VSQVLPPSRW 112
           ASE D   EV+ASKKIADAKLAKDFQAVLKEFQKAQRL+AERETAY+  V Q L PS +
Sbjct: 84  ASEIDHNVEVNASKKIADAKLAKDFQAVLKEFQKAQRLSAERETAYTPFVPQALLPSSY 142


>ref|XP_002278649.1| PREDICTED: syntaxin-22 [Vitis vinifera]
           gi|147791633|emb|CAN75135.1| hypothetical protein
           VITISV_018887 [Vitis vinifera]
           gi|297742058|emb|CBI33845.3| unnamed protein product
           [Vitis vinifera]
          Length = 274

 Score =  190 bits (483), Expect = 9e-47
 Identities = 101/119 (84%), Positives = 109/119 (91%), Gaps = 2/119 (1%)
 Frame = -3

Query: 462 DPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRDKLQKTRLHIGRLVKDTTAKLKQ 283
           DPTQAVASG+FQINTAVSTFQRLVNTLGTPKDT ELR+KL KTRLHIG+LVKDT+AKLKQ
Sbjct: 25  DPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTSELREKLHKTRLHIGQLVKDTSAKLKQ 84

Query: 282 ASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS--VSQVLPPSRW 112
           ASETD + EVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAY+  V Q + PS +
Sbjct: 85  ASETDHHAEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQSVLPSSY 143


>gb|ABA46757.1| syntaxin-like protein [Solanum tuberosum]
          Length = 273

 Score =  190 bits (482), Expect = 1e-46
 Identities = 100/119 (84%), Positives = 108/119 (90%), Gaps = 2/119 (1%)
 Frame = -3

Query: 462 DPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRDKLQKTRLHIGRLVKDTTAKLKQ 283
           DPTQAVASG+FQINTAVSTFQRLVNTLGTPKDTPELR+KL KTR+HIG+LVKDT+AKLKQ
Sbjct: 24  DPTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRVHIGQLVKDTSAKLKQ 83

Query: 282 ASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS--VSQVLPPSRW 112
           ASETD   EVSASKKI DAKLAKDFQAVLKEFQKAQRLAAERETAY+  V Q + PS +
Sbjct: 84  ASETDHRVEVSASKKITDAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSY 142


>gb|ABK24740.1| unknown [Picea sitchensis] gi|148909620|gb|ABR17901.1| unknown
           [Picea sitchensis]
          Length = 273

 Score =  190 bits (482), Expect = 1e-46
 Identities = 99/120 (82%), Positives = 111/120 (92%), Gaps = 2/120 (1%)
 Frame = -3

Query: 462 DPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRDKLQKTRLHIGRLVKDTTAKLKQ 283
           DP+QAVASGVFQINTAVSTFQRLVNTLGTPKDTPELR++L KTR HIG+LVKDT+AKLK 
Sbjct: 24  DPSQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRERLHKTRQHIGQLVKDTSAKLKA 83

Query: 282 ASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS--VSQVLPPSRWM 109
           ASETDQ+TEVSA+KKIADAKLAKDFQAVLKEFQKAQRLAAERETAY+  + Q + PS ++
Sbjct: 84  ASETDQHTEVSANKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFIPQAVLPSSYI 143


>ref|XP_004165583.1| PREDICTED: LOW QUALITY PROTEIN: syntaxin-22-like [Cucumis sativus]
          Length = 253

 Score =  189 bits (480), Expect = 2e-46
 Identities = 106/143 (74%), Positives = 117/143 (81%), Gaps = 11/143 (7%)
 Frame = -3

Query: 462 DPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELRDKLQKTRLHIGRLVKDTTAKLKQ 283
           DPTQAVASG+FQINTAV+TFQRLVNTLGTPKDTPELR+KL KTRLHIG+LVKDT+AKLKQ
Sbjct: 25  DPTQAVASGIFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKQ 84

Query: 282 ASETDQYTEVSASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS---VSQVLPPS-- 118
           AS+ D + EV+ASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYS      VLP S  
Sbjct: 85  ASDIDHHAEVNASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYSPFVPPTVLPSSYT 144

Query: 117 RW------MMKLECRRCLLQNRR 67
            W         LE R  L+++RR
Sbjct: 145 AWEADASSEKNLEQRALLVESRR 167


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