BLASTX nr result

ID: Coptis23_contig00002933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002933
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554360.1| PREDICTED: nuclear transcription factor Y su...   207   3e-51
ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y su...   207   3e-51
ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [...   205   1e-50
ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, ...   205   1e-50
ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y su...   205   2e-50

>ref|XP_003554360.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           1 [Glycine max]
          Length = 159

 Score =  207 bits (527), Expect = 3e-51
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = -1

Query: 659 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 480
           SHESGE SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 479 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME 342
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 117


>ref|XP_003554361.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           2 [Glycine max]
          Length = 171

 Score =  207 bits (527), Expect = 3e-51
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = -1

Query: 659 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 480
           SHESGE SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 479 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME 342
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 117


>ref|XP_003625575.1| Nuclear transcription factor Y subunit B-3 [Medicago truncatula]
           gi|355500590|gb|AES81793.1| Nuclear transcription factor
           Y subunit B-3 [Medicago truncatula]
           gi|388523199|gb|AFK49652.1| nuclear transcription factor
           Y subunit B2 [Medicago truncatula]
          Length = 171

 Score =  205 bits (522), Expect = 1e-50
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -1

Query: 659 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 480
           SHESGE SPRSN+REQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 479 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME 342
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 117


>ref|XP_003623108.1| Nuclear transcription factor Y subunit B-3, partial [Medicago
           truncatula] gi|355498123|gb|AES79326.1| Nuclear
           transcription factor Y subunit B-3, partial [Medicago
           truncatula]
          Length = 474

 Score =  205 bits (522), Expect = 1e-50
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -1

Query: 659 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 480
           SHESGE SPRSN+REQDR+LPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGEHSPRSNIREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 479 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME 342
           EASDKCQREKRKTINGDDLLWAMATLGFE+YIDPLK+YL+RYREME
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLTRYREME 117


>ref|XP_003521372.1| PREDICTED: nuclear transcription factor Y subunit B-8-like [Glycine
           max]
          Length = 171

 Score =  205 bits (521), Expect = 2e-50
 Identities = 99/106 (93%), Positives = 104/106 (98%)
 Frame = -1

Query: 659 SHESGEQSPRSNVREQDRYLPIANISRIMKKGLPANGKIAKDAKETVQECVSEFISFITS 480
           SHESG+ SPRSNVREQDRYLPIANISRIMKK LPANGKIAKDAKETVQECVSEFISFITS
Sbjct: 12  SHESGDHSPRSNVREQDRYLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITS 71

Query: 479 EASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLSRYREME 342
           EASDKCQREKRKTINGDDLLWAMATLGFE+Y+DPLK+YL+RYREME
Sbjct: 72  EASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRYREME 117


Top