BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002930
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation...    86   1e-31
ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|1...    87   2e-31
ref|XP_002516208.1| Eukaryotic translation initiation factor 3 s...    89   3e-31
ref|XP_003609944.1| Eukaryotic translation initiation factor 3 s...    85   3e-30
gb|AFK49177.1| unknown [Medicago truncatula]                           84   4e-30

>ref|XP_002274986.1| PREDICTED: eukaryotic translation initiation factor 3 subunit K
           [Vitis vinifera] gi|297738508|emb|CBI27753.3| unnamed
           protein product [Vitis vinifera]
          Length = 229

 Score = 85.9 bits (211), Expect(2) = 1e-31
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +3

Query: 225 HQSTNCSWILEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 380
           HQ  NC W+LEK Q +GQLI LP NEFN P+LKK+ ADSIPLEH+ RIFPIL
Sbjct: 177 HQVANCGWVLEKSQGKGQLIVLPPNEFNHPELKKNAADSIPLEHITRIFPIL 228



 Score = 75.9 bits (185), Expect(2) = 1e-31
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = +1

Query: 4   ILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEG 123
           I+EVVPGFEQAIQAYAIHVLSLTYQKVPR+V+AEAINIEG
Sbjct: 129 IVEVVPGFEQAIQAYAIHVLSLTYQKVPRTVLAEAINIEG 168


>ref|XP_002326147.1| predicted protein [Populus trichocarpa] gi|118488161|gb|ABK95900.1|
           unknown [Populus trichocarpa]
           gi|222833340|gb|EEE71817.1| predicted protein [Populus
           trichocarpa]
          Length = 235

 Score = 86.7 bits (213), Expect(2) = 2e-31
 Identities = 40/51 (78%), Positives = 42/51 (82%)
 Frame = +3

Query: 228 QSTNCSWILEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 380
           Q  NC WILEK   RGQLI LP NEFN P+LKK+TADSIPLEHVARIFPIL
Sbjct: 184 QVANCGWILEKSHGRGQLIVLPSNEFNHPELKKNTADSIPLEHVARIFPIL 234



 Score = 74.3 bits (181), Expect(2) = 2e-31
 Identities = 36/40 (90%), Positives = 39/40 (97%)
 Frame = +1

Query: 4   ILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEG 123
           I+E VPGFEQAIQAYAIH+LSLTYQKVPRSV+AEAINIEG
Sbjct: 135 IVEAVPGFEQAIQAYAIHLLSLTYQKVPRSVLAEAINIEG 174


>ref|XP_002516208.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223544694|gb|EEF46210.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 236

 Score = 89.0 bits (219), Expect(2) = 3e-31
 Identities = 39/52 (75%), Positives = 44/52 (84%)
 Frame = +3

Query: 225 HQSTNCSWILEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPIL 380
           HQ  NC WI+EKG  +GQLI LP NEFN P+LKK+TAD+IPLEHVARIFPIL
Sbjct: 184 HQVANCGWIIEKGHGKGQLIVLPSNEFNHPELKKNTADTIPLEHVARIFPIL 235



 Score = 71.2 bits (173), Expect(2) = 3e-31
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = +1

Query: 4   ILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIE 120
           I+E VPGFEQA+QAYAIH+LSLTYQKVPRSV+AEAIN+E
Sbjct: 136 IVEAVPGFEQAVQAYAIHLLSLTYQKVPRSVLAEAINVE 174


>ref|XP_003609944.1| Eukaryotic translation initiation factor 3 subunit K [Medicago
           truncatula] gi|355510999|gb|AES92141.1| Eukaryotic
           translation initiation factor 3 subunit K [Medicago
           truncatula]
          Length = 235

 Score = 85.1 bits (209), Expect(2) = 3e-30
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +3

Query: 225 HQSTNCSWILEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPILS 383
           HQ  N  W++EK Q +GQLI LPRNEFN P LKK+TADS+PLEHV RIFPILS
Sbjct: 183 HQVENSGWVIEKSQGKGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPILS 235



 Score = 72.0 bits (175), Expect(2) = 3e-30
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 4   ILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEG 123
           I+E VPGFEQAIQ YAIHVLSLTYQK+PR+V+AEAIN+EG
Sbjct: 135 IVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEG 174


>gb|AFK49177.1| unknown [Medicago truncatula]
          Length = 235

 Score = 84.3 bits (207), Expect(2) = 4e-30
 Identities = 38/53 (71%), Positives = 42/53 (79%)
 Frame = +3

Query: 225 HQSTNCSWILEKGQSRGQLITLPRNEFNQPDLKKSTADSIPLEHVARIFPILS 383
           HQ  N  W++EK Q  GQLI LPRNEFN P LKK+TADS+PLEHV RIFPILS
Sbjct: 183 HQVENSGWVIEKSQGEGQLIVLPRNEFNDPILKKNTADSVPLEHVTRIFPILS 235



 Score = 72.0 bits (175), Expect(2) = 4e-30
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = +1

Query: 4   ILEVVPGFEQAIQAYAIHVLSLTYQKVPRSVVAEAINIEG 123
           I+E VPGFEQAIQ YAIHVLSLTYQK+PR+V+AEAIN+EG
Sbjct: 135 IVEAVPGFEQAIQGYAIHVLSLTYQKIPRTVLAEAINVEG 174