BLASTX nr result

ID: Coptis23_contig00002925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002925
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]               120   1e-25
emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]    69   3e-10
emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]    68   9e-10
emb|CAN67992.1| hypothetical protein VITISV_015686 [Vitis vinifera]    67   1e-09
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]    67   2e-09

>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/91 (64%), Positives = 67/91 (73%)
 Frame = +2

Query: 59  SWLKNNAKIITWINNSVELSIGMQLVKFATAKAVWGHLAKLFVQSNFAKRFQLEQDIKDA 238
           +W  NNAKIITWINN VE SIG QL K+ TAK VW HL +LF QSNFAK++QLE DI+  
Sbjct: 61  TWEANNAKIITWINNYVEHSIGTQLAKYETAKEVWDHLQRLFTQSNFAKQYQLENDIRAL 120

Query: 239 QQGDKSIQEFYATMMGLWDQLALLEPTELSA 331
            Q + SIQEFY+ M  LWDQLAL E  EL A
Sbjct: 121 HQKNMSIQEFYSAMTDLWDQLALTESVELKA 151


>emb|CAN69462.1| hypothetical protein VITISV_002919 [Vitis vinifera]
          Length = 993

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/99 (42%), Positives = 52/99 (52%)
 Frame = +2

Query: 41  LDRIEGSWLKNNAKIITWINNSVELSIGMQLVKFATAKAVWGHLAKLFVQSNFAKRFQLE 220
           +D +E S   NN+KI+  INN  E SIG+QL K+  AK VW HLA   +     KR    
Sbjct: 57  IDMLE-SXEANNSKIJIXINNFXEHSIGIQLAKYEIAKQVWDHLALXLIFEQCNKRM--- 112

Query: 221 QDIKDAQQGDKSIQEFYATMMGLWDQLALLEPTELSANL 337
                      S QEFY+TM  LWDQL L E   L +N+
Sbjct: 113 -----------STQEFYSTMSDLWDQLELTEXASLQSNV 140


>emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]
          Length = 1652

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/82 (39%), Positives = 52/82 (63%)
 Frame = +2

Query: 59  SWLKNNAKIITWINNSVELSIGMQLVKFATAKAVWGHLAKLFVQSNFAKRFQLEQDIKDA 238
           SW+  +A+I++W+  SVE  I   L    +A+++W +L K++ Q N A+RFQL+  I   
Sbjct: 151 SWIVLDARIMSWLLGSVEPHIVTHLRPHCSAQSMWAYLKKVYHQDNDARRFQLDHAIAMF 210

Query: 239 QQGDKSIQEFYATMMGLWDQLA 304
           Q G  SIQ++Y+T + LW + A
Sbjct: 211 QHGSLSIQDYYSTFLTLWHEYA 232


>emb|CAN67992.1| hypothetical protein VITISV_015686 [Vitis vinifera]
          Length = 1308

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/89 (38%), Positives = 54/89 (60%)
 Frame = +2

Query: 59  SWLKNNAKIITWINNSVELSIGMQLVKFATAKAVWGHLAKLFVQSNFAKRFQLEQDIKDA 238
           SW   +A+I++W+  SVE  I   L    +A+++W +L K++ Q N A+RFQLE  I   
Sbjct: 46  SWAVLDARIMSWLIGSVEPHIVTHLRPHRSAQSMWAYLKKVYHQDNDARRFQLEHAIAMF 105

Query: 239 QQGDKSIQEFYATMMGLWDQLALLEPTEL 325
           Q G  SIQ++Y+  + LW + A L  T++
Sbjct: 106 QHGSLSIQDYYSAFLTLWHEYADLVTTDV 134


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/91 (34%), Positives = 50/91 (54%)
 Frame = +2

Query: 44  DRIEGSWLKNNAKIITWINNSVELSIGMQLVKFATAKAVWGHLAKLFVQSNFAKRFQLEQ 223
           D + G+W++ N+ +I+WI NSV   I   L+ F TA  +W  L   F QSN  + FQ+++
Sbjct: 81  DLLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKK 140

Query: 224 DIKDAQQGDKSIQEFYATMMGLWDQLALLEP 316
            +    QG   +  +Y  +  LWD+L   +P
Sbjct: 141 HLIALSQGSLDVSTYYTRLKILWDELKGFQP 171


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