BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002920
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein ...   152   4e-35
ref|XP_004141535.1| PREDICTED: ribosomal RNA processing protein ...   147   1e-33
ref|XP_002509710.1| conserved hypothetical protein [Ricinus comm...   145   4e-33
ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
gb|ACU21223.1| unknown [Glycine max]                                  137   1e-30

>ref|XP_002282782.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Vitis
           vinifera] gi|297742597|emb|CBI34746.3| unnamed protein
           product [Vitis vinifera]
          Length = 236

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/126 (58%), Positives = 93/126 (73%)
 Frame = +3

Query: 171 KLAHVSLEELQKARSNGFHPMHQKIKEDKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQ 350
           +LA V+ EELQKARS+G H +++  K +K GGR NKNRPME+SSKKPV RFRE IQVPK+
Sbjct: 28  ELADVTFEELQKARSDGSHSVYRMPKSEKKGGRPNKNRPMEVSSKKPVSRFRETIQVPKR 87

Query: 351 VIRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXXSNDPEVIADLKNRLSS 530
           V+RDPRFESLCG LD D F++RY+F+Y                 +NDP+VI +LKN++S 
Sbjct: 88  VVRDPRFESLCGTLDADGFRKRYNFLYETELPAEREGLKKELKKANDPKVIEELKNQISW 147

Query: 531 IDKQLK 548
           IDKQLK
Sbjct: 148 IDKQLK 153


>ref|XP_004141535.1| PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis
           sativus] gi|449481495|ref|XP_004156200.1| PREDICTED:
           ribosomal RNA processing protein 36 homolog [Cucumis
           sativus]
          Length = 253

 Score =  147 bits (371), Expect = 1e-33
 Identities = 73/126 (57%), Positives = 88/126 (69%)
 Frame = +3

Query: 171 KLAHVSLEELQKARSNGFHPMHQKIKEDKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQ 350
           +LA V+ EELQ+ARS+G H M+QK K++K  GR NKNRPME+SS+KPV RFREVIQ PK 
Sbjct: 42  ELADVTFEELQRARSDGSHSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKN 101

Query: 351 VIRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXXSNDPEVIADLKNRLSS 530
           ++RDPRFESL G LD D FK+RYSFIY                 +NDP V  +LK +LS 
Sbjct: 102 MVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSW 161

Query: 531 IDKQLK 548
           IDKQ K
Sbjct: 162 IDKQFK 167


>ref|XP_002509710.1| conserved hypothetical protein [Ricinus communis]
           gi|223549609|gb|EEF51097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score =  145 bits (366), Expect = 4e-33
 Identities = 71/126 (56%), Positives = 88/126 (69%)
 Frame = +3

Query: 171 KLAHVSLEELQKARSNGFHPMHQKIKEDKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQ 350
           ++A  + EELQKARSNG   +HQK K++K  GR NKNRPME+S KKPV RFREV Q PK+
Sbjct: 44  EIADATFEELQKARSNGSISVHQKPKQEKKPGRANKNRPMEVSCKKPVSRFREVFQAPKK 103

Query: 351 VIRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXXSNDPEVIADLKNRLSS 530
           V+RDPRFESLCG LD D F++RY+F+Y                 SN+P+VI  LKN +S 
Sbjct: 104 VVRDPRFESLCGQLDVDGFRKRYNFLYEENLPAEREEAKKQLKKSNNPKVIDQLKNHISL 163

Query: 531 IDKQLK 548
           IDK+LK
Sbjct: 164 IDKELK 169


>ref|XP_002299562.1| predicted protein [Populus trichocarpa] gi|222846820|gb|EEE84367.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/126 (53%), Positives = 88/126 (69%)
 Frame = +3

Query: 171 KLAHVSLEELQKARSNGFHPMHQKIKEDKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQ 350
           +LA V+ E+LQKA+SNG   + +K  ++K GGR NKNRP E+S KKPV RFREV+QVPK+
Sbjct: 36  ELAEVTFEDLQKAKSNGSLTVFKKPDQEKKGGRANKNRPTEVSCKKPVSRFREVVQVPKK 95

Query: 351 VIRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXXSNDPEVIADLKNRLSS 530
           V+RDPRFESLCGNLD + F++RY F++                 SNDP+VI  LK R+S 
Sbjct: 96  VVRDPRFESLCGNLDVEGFRKRYDFLFKNNLPAEKEELKKQLKKSNDPKVIDQLKERISW 155

Query: 531 IDKQLK 548
           I+KQ K
Sbjct: 156 IEKQTK 161


>gb|ACU21223.1| unknown [Glycine max]
          Length = 250

 Score =  137 bits (345), Expect = 1e-30
 Identities = 71/126 (56%), Positives = 85/126 (67%)
 Frame = +3

Query: 171 KLAHVSLEELQKARSNGFHPMHQKIKEDKMGGRVNKNRPMEISSKKPVGRFREVIQVPKQ 350
           +LA V+ EELQKARSNG H   QK KEDK   R NKNRPME SSKKPV  FREVIQ PK+
Sbjct: 42  ELADVTFEELQKARSNGTHAFFQKPKEDKKLKRANKNRPMEASSKKPVSGFREVIQAPKK 101

Query: 351 VIRDPRFESLCGNLDTDWFKRRYSFIYXXXXXXXXXXXXXXXXXSNDPEVIADLKNRLSS 530
           V+RDPRFESLCG LD + F++RY+F+Y                   DP+ I +++ R+S 
Sbjct: 102 VVRDPRFESLCGKLDPEGFRKRYNFLYENDLPAERQALKKELKKYKDPKRINEIEERVSW 161

Query: 531 IDKQLK 548
           IDKQLK
Sbjct: 162 IDKQLK 167