BLASTX nr result
ID: Coptis23_contig00002918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00002918
(2262 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280990.1| PREDICTED: carbon catabolite repressor prote... 803 0.0
ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|1... 802 0.0
emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera] 801 0.0
ref|XP_002531170.1| carbon catabolite repressor protein, putativ... 798 0.0
ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|2... 797 0.0
>ref|XP_002280990.1| PREDICTED: carbon catabolite repressor protein 4 homolog 1 [Vitis
vinifera] gi|297739794|emb|CBI29976.3| unnamed protein
product [Vitis vinifera]
Length = 603
Score = 803 bits (2073), Expect = 0.0
Identities = 412/600 (68%), Positives = 460/600 (76%), Gaps = 31/600 (5%)
Frame = -3
Query: 2089 MLTLVRVHLPSDIPIVGCELNPYILLQRPSDNSFITHDVPESSPIDRYYIRHKWYRIQSD 1910
ML+++RVHLPSDIPIVGCEL PY+LL+RP D + T DVPES+PI+ +++R+KWYRIQSD
Sbjct: 1 MLSVLRVHLPSDIPIVGCELTPYVLLRRP-DKNLTTEDVPESAPIEGHFLRYKWYRIQSD 59
Query: 1909 KKVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDAWQHHRVLHDRPXXXXXXX 1730
+KVAVCS+HP E ATLQCLGC+KAK+P KSYHCS +CFSDAWQHHRVLHDR
Sbjct: 60 RKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDR-AASAVNE 118
Query: 1729 XXXXXXELFGRL-----------------------GSAPVYPTA--EKTSGEIWFEVGRS 1625
ELFGR GSAP+YP A +++ GE WFEVGRS
Sbjct: 119 NGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGSAPLYPAAVTQRSGGETWFEVGRS 178
Query: 1624 KTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIP---VXXX 1454
KTYTPT DDIGHVLKFECV VDAETKL VGH ILTSRVIPAP+PTPR LI V
Sbjct: 179 KTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMV 238
Query: 1453 XXXXXXXXXXXXXXXXXXXXXILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHAD 1274
IL++V+AT+E YSYCPSWALSW YRKQNLLREIVGY AD
Sbjct: 239 GHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRAD 298
Query: 1273 IICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVK 1094
I+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVK
Sbjct: 299 IVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVK 358
Query: 1093 KYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQ 920
KYEVEFNKAA SLTDA++ P +KT LNRL+KDNVALIAVLEAKF+ G D KRQ
Sbjct: 359 KYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQ 415
Query: 919 LLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 740
LLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA
Sbjct: 416 LLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 475
Query: 739 MGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFARSRAP-GLEQQRMRTDLTTNE 563
MGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D +TNE
Sbjct: 476 MGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNE 535
Query: 562 PLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 383
PLFT+CTRDFI T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 536 PLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002323345.1| predicted protein [Populus trichocarpa] gi|118486421|gb|ABK95050.1|
unknown [Populus trichocarpa] gi|222867975|gb|EEF05106.1|
predicted protein [Populus trichocarpa]
Length = 603
Score = 802 bits (2071), Expect = 0.0
Identities = 409/600 (68%), Positives = 461/600 (76%), Gaps = 31/600 (5%)
Frame = -3
Query: 2089 MLTLVRVHLPSDIPIVGCELNPYILLQRPSDNSFITHDVPESSPIDRYYIRHKWYRIQSD 1910
ML+++RVHLPSDIPIVGCEL PY+LL+RP N+ T DVPES+P+D +++R+KWYRIQSD
Sbjct: 1 MLSVIRVHLPSDIPIVGCELTPYVLLRRPDTNA-TTDDVPESAPLDGHFLRYKWYRIQSD 59
Query: 1909 KKVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDAWQHHRVLHDRPXXXXXXX 1730
+KVA+CS+HP EQATLQCLGC+KAK+P KSYHCS +CFSDAWQHHRVLHDR
Sbjct: 60 RKVAICSVHPSEQATLQCLGCVKAKLPVAKSYHCSPKCFSDAWQHHRVLHDR-AASAINE 118
Query: 1729 XXXXXXELFGRL-----------------------GSAPVYPTA--EKTSGEIWFEVGRS 1625
ELFGR GS P+YP A +++ GE WFEVGRS
Sbjct: 119 NGNEEEELFGRFNSSGSGVMNTSLSGSASSASLTNGSTPLYPAAVTQRSGGETWFEVGRS 178
Query: 1624 KTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPV---XXX 1454
KTYTP+ DDIGHVLKFECV VDAETKLPVGH+ +LTSRVIPAP+PTPRRLI V
Sbjct: 179 KTYTPSADDIGHVLKFECVVVDAETKLPVGHSNTLLTSRVIPAPSPTPRRLISVSGLDAM 238
Query: 1453 XXXXXXXXXXXXXXXXXXXXXILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHAD 1274
IL++VYAT ++YSYCPSWALSW YR+QNLLREIVGY AD
Sbjct: 239 APLDSDGRISSSGTFTVLSYNILSDVYATNDTYSYCPSWALSWPYRRQNLLREIVGYRAD 298
Query: 1273 IICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVK 1094
I+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV N HT+DGCATFFRR+RFSHVK
Sbjct: 299 IVCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVYNINTHTIDGCATFFRRDRFSHVK 358
Query: 1093 KYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQ 920
KYEVEFNKAA SLTDAL+ P RKT LNRL+KDNVALI VLEAKF+N G D KRQ
Sbjct: 359 KYEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQ 415
Query: 919 LLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 740
LLCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNSVPGSAPH+LLA
Sbjct: 416 LLCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLA 475
Query: 739 MGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNE 563
MGKV+Q+HPDL +DPLGI+ P +KL+HQLPLVSAYSSFAR G +QQR R D TTNE
Sbjct: 476 MGKVDQLHPDLVVDPLGILRPHSKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNE 535
Query: 562 PLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 383
PLFT CTRDFI T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 536 PLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>emb|CAN73496.1| hypothetical protein VITISV_044263 [Vitis vinifera]
Length = 603
Score = 801 bits (2068), Expect = 0.0
Identities = 411/600 (68%), Positives = 459/600 (76%), Gaps = 31/600 (5%)
Frame = -3
Query: 2089 MLTLVRVHLPSDIPIVGCELNPYILLQRPSDNSFITHDVPESSPIDRYYIRHKWYRIQSD 1910
ML+++RVHLPSDIPIVGCEL PY+LL+RP D + T DVPE +PI+ +++R+KWYRIQSD
Sbjct: 1 MLSVLRVHLPSDIPIVGCELTPYVLLRRP-DKNLTTEDVPEXAPIEGHFLRYKWYRIQSD 59
Query: 1909 KKVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDAWQHHRVLHDRPXXXXXXX 1730
+KVAVCS+HP E ATLQCLGC+KAK+P KSYHCS +CFSDAWQHHRVLHDR
Sbjct: 60 RKVAVCSVHPSEHATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDR-AASAVNE 118
Query: 1729 XXXXXXELFGRL-----------------------GSAPVYPTA--EKTSGEIWFEVGRS 1625
ELFGR GSAP+YP A +++ GE WFEVGRS
Sbjct: 119 NGNEEEELFGRFNSTGSGSINTSLAPSASSASLANGSAPLYPAAVTQRSGGETWFEVGRS 178
Query: 1624 KTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIP---VXXX 1454
KTYTPT DDIGHVLKFECV VDAETKL VGH ILTSRVIPAP+PTPR LI V
Sbjct: 179 KTYTPTADDIGHVLKFECVVVDAETKLTVGHGSNILTSRVIPAPSPTPRHLISVSGVDMV 238
Query: 1453 XXXXXXXXXXXXXXXXXXXXXILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHAD 1274
IL++V+AT+E YSYCPSWALSW YRKQNLLREIVGY AD
Sbjct: 239 GHLDSDGRISSAGTFTVLSYNILSDVFATSELYSYCPSWALSWPYRKQNLLREIVGYRAD 298
Query: 1273 IICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVK 1094
I+CLQE+QSDHFEEFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVK
Sbjct: 299 IVCLQEIQSDHFEEFFAPELDKHGYQALYKRKTNEVYTGNIHTIDGCATFFRRDRFSHVK 358
Query: 1093 KYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQ 920
KYEVEFNKAA SLTDA++ P +KT LNRL+KDNVALIAVLEAKF+ G D KRQ
Sbjct: 359 KYEVEFNKAAQSLTDAVV---PSAQKKTALNRLVKDNVALIAVLEAKFSYQGADIPGKRQ 415
Query: 919 LLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 740
LLCVANTH++V+Q+LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA
Sbjct: 416 LLCVANTHINVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 475
Query: 739 MGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFARSRAP-GLEQQRMRTDLTTNE 563
MGKV+ MHPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D +TNE
Sbjct: 476 MGKVDPMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMGVGIGLEQQRRRLDPSTNE 535
Query: 562 PLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 383
PLFT+CTRDFI T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 536 PLFTHCTRDFIGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002531170.1| carbon catabolite repressor protein, putative [Ricinus communis]
gi|223529240|gb|EEF31213.1| carbon catabolite repressor
protein, putative [Ricinus communis]
Length = 603
Score = 798 bits (2060), Expect = 0.0
Identities = 407/600 (67%), Positives = 463/600 (77%), Gaps = 31/600 (5%)
Frame = -3
Query: 2089 MLTLVRVHLPSDIPIVGCELNPYILLQRPSDNSFITHDVPESSPIDRYYIRHKWYRIQSD 1910
ML+++RVHLPSDIPIVGCEL PY+LL+RP D + T DVPES+P+D +++R+KWYRIQSD
Sbjct: 1 MLSVIRVHLPSDIPIVGCELTPYVLLRRP-DKAVTTDDVPESAPLDGHFLRYKWYRIQSD 59
Query: 1909 KKVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDAWQHHRVLHDRPXXXXXXX 1730
+KVAVCS+HP EQATLQCLGC+KAK+P KSYHCS++CFSDAWQHHRVLHDR
Sbjct: 60 RKVAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSTKCFSDAWQHHRVLHDR-AASAVSE 118
Query: 1729 XXXXXXELFGRL-----------------------GSAPVYP--TAEKTSGEIWFEVGRS 1625
E+FGR GSAP+YP A+++ GE WFEVGRS
Sbjct: 119 NGNDEEEVFGRFNSTGSGVLNTSLSSSASTASLTNGSAPLYPAAVAQRSGGETWFEVGRS 178
Query: 1624 KTYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPV---XXX 1454
KTYTP+ DDIGHVLKFECV VDAE+KLPVGH ILTSRVIPAP+PTPRRLIPV
Sbjct: 179 KTYTPSADDIGHVLKFECVVVDAESKLPVGHPNTILTSRVIPAPSPTPRRLIPVSGIDVM 238
Query: 1453 XXXXXXXXXXXXXXXXXXXXXILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHAD 1274
IL++VYAT+E+YSYCPSWALSW YR+QNLLREIVGY AD
Sbjct: 239 GHLDSDGRISSSGTFTVLSYNILSDVYATSETYSYCPSWALSWPYRRQNLLREIVGYRAD 298
Query: 1273 IICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVK 1094
I+CLQEVQ+DH+EEFFAPELDKHGYQALYK+KT EV +G + T+DGCATFFRR+RFSHVK
Sbjct: 299 IVCLQEVQNDHYEEFFAPELDKHGYQALYKRKTNEVYSGNSPTIDGCATFFRRDRFSHVK 358
Query: 1093 KYEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQ 920
KYEVEFNKAA SLT+A++ P RKT LNRL+KDNVALI VLEAKF+N G D KRQ
Sbjct: 359 KYEVEFNKAAQSLTEAVV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGADNPGKRQ 415
Query: 919 LLCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 740
LLCVANTHV+++ DLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNS+PGSAPH+LLA
Sbjct: 416 LLCVANTHVNIHHDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSMPGSAPHSLLA 475
Query: 739 MGKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNE 563
MGKV+ +HPDL IDPLGI+ P +KL+HQLPLVSAYSSFAR GLEQQR R D TNE
Sbjct: 476 MGKVDPLHPDLVIDPLGILRPHSKLTHQLPLVSAYSSFARLGVGLGLEQQRRRMDPATNE 535
Query: 562 PLFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 383
PLFT CTRDFI T+DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 536 PLFTNCTRDFIGTLDYIFYTADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 595
>ref|XP_002308351.1| predicted protein [Populus trichocarpa] gi|222854327|gb|EEE91874.1|
predicted protein [Populus trichocarpa]
Length = 602
Score = 797 bits (2059), Expect = 0.0
Identities = 408/599 (68%), Positives = 456/599 (76%), Gaps = 30/599 (5%)
Frame = -3
Query: 2089 MLTLVRVHLPSDIPIVGCELNPYILLQRPSDNSFITHDVPESSPIDRYYIRHKWYRIQSD 1910
ML+++RVHLPSDIPIVGCEL PY++L+RP D +IT DVPES+P+D +++R+KWYRIQSD
Sbjct: 1 MLSVLRVHLPSDIPIVGCELTPYVVLRRP-DKDYITDDVPESAPLDGHFLRYKWYRIQSD 59
Query: 1909 KKVAVCSIHPLEQATLQCLGCLKAKVPALKSYHCSSRCFSDAWQHHRVLHDRPXXXXXXX 1730
+KVAVCS+HP E ATLQC+GC+KAK+P KSYHCS +CFSDAWQHHRVLHDR
Sbjct: 60 RKVAVCSVHPSEHATLQCIGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDR-AASAVNE 118
Query: 1729 XXXXXXELFGRL-----------------------GSAPVYPTA-EKTSGEIWFEVGRSK 1622
ELFGR GS P+YP A + SGE WFEVGRSK
Sbjct: 119 NGNEEEELFGRYNSSGSGVLNTSLSGSASSASLTNGSTPLYPAAVTQRSGETWFEVGRSK 178
Query: 1621 TYTPTVDDIGHVLKFECVAVDAETKLPVGHAKAILTSRVIPAPTPTPRRLIPV---XXXX 1451
YTP+ DDIGHVLKFECV VDAETKLPVGH +LTSRVIPAP+PTPRRLIPV
Sbjct: 179 IYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPTPRRLIPVSGLDAMV 238
Query: 1450 XXXXXXXXXXXXXXXXXXXXILAEVYATTESYSYCPSWALSWSYRKQNLLREIVGYHADI 1271
IL++VYAT E+YSYCPSWALSW YR+QNLLREIVGY ADI
Sbjct: 239 PLDLDGRISSTGTFTVLSYNILSDVYATNETYSYCPSWALSWPYRRQNLLREIVGYRADI 298
Query: 1270 ICLQEVQSDHFEEFFAPELDKHGYQALYKKKTTEVSNGTAHTVDGCATFFRRERFSHVKK 1091
+CLQEVQSDH+EEFFAPELDKHGYQALYK+KT EV G HT+DGCATFFRR+RFSHVKK
Sbjct: 299 VCLQEVQSDHYEEFFAPELDKHGYQALYKRKTNEVYAGNTHTIDGCATFFRRDRFSHVKK 358
Query: 1090 YEVEFNKAAHSLTDALITNNPGLSRKTCLNRLLKDNVALIAVLEAKFNNHGTD--AKRQL 917
YEVEFNKAA SLTDAL+ P RKT LNRL+KDNVALI VLEAKF+N G D KRQL
Sbjct: 359 YEVEFNKAAQSLTDALV---PSAQRKTALNRLVKDNVALIVVLEAKFSNQGVDNPGKRQL 415
Query: 916 LCVANTHVHVNQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAM 737
LCVANTH++V+QDLKDVKLWQV TLLKGLEKIAASADIPMLVCGDFNSVPGSAPH+LLAM
Sbjct: 416 LCVANTHINVHQDLKDVKLWQVLTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAM 475
Query: 736 GKVEQMHPDLTIDPLGIVHPPAKLSHQLPLVSAYSSFAR-SRAPGLEQQRMRTDLTTNEP 560
GKV+ +HPDL +DPLGI+ P KL+HQLPLVSAYSSFAR G +QQR R D TTNEP
Sbjct: 476 GKVDPLHPDLVVDPLGILRPHNKLTHQLPLVSAYSSFARVGVGLGSDQQRRRMDATTNEP 535
Query: 559 LFTYCTRDFICTVDYIFYTANXXXXXXXXXXXXXXXLRKDTALPSPEWSSDHIALLAEF 383
LFT CTRDFI +DYIFYTA+ LRKDTALPSPEWSSDHIALLAEF
Sbjct: 536 LFTNCTRDFIGALDYIFYTADSLMVESLLELLDEESLRKDTALPSPEWSSDHIALLAEF 594