BLASTX nr result

ID: Coptis23_contig00002917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002917
         (1075 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P21820.1|TPIS_COPJA RecName: Full=Triosephosphate isomerase, ...   463   e-128
gb|ACM67308.2| triosphosphate isomerase-like protein type I [Dim...   411   e-112
gb|ABB02628.1| triose phosphate isomerase cytosolic isoform-like...   407   e-111
gb|AFL48185.1| triose phosphate isomerase cytosolic isoform-like...   404   e-110
gb|ABA46792.1| triosphosphate isomerase-like protein [Solanum tu...   403   e-110

>sp|P21820.1|TPIS_COPJA RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM;
           Short=Triose-phosphate isomerase
           gi|556171|gb|AAB62730.1| triosephosphate isomerase
           [Coptis japonica]
          Length = 253

 Score =  463 bits (1191), Expect = e-128
 Identities = 237/253 (93%), Positives = 237/253 (93%)
 Frame = -1

Query: 979 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAXXXXXXXXXXXXXXXXVFLPFVKNLLRADF 800
           MGRKFFVGGNWKCNGTSEEVKKIVTLLNEA                VFLPFVKNLLRADF
Sbjct: 1   MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADF 60

Query: 799 HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 620
           HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 120

Query: 619 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 440
           GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA
Sbjct: 121 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 180

Query: 439 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 260
           QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE
Sbjct: 181 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 240

Query: 259 FVDIIKSATVKSS 221
           FVDIIKSATVKSS
Sbjct: 241 FVDIIKSATVKSS 253


>gb|ACM67308.2| triosphosphate isomerase-like protein type I [Dimocarpus longan]
          Length = 254

 Score =  411 bits (1056), Expect = e-112
 Identities = 203/253 (80%), Positives = 222/253 (87%)
 Frame = -1

Query: 979 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAXXXXXXXXXXXXXXXXVFLPFVKNLLRADF 800
           M RKF VGGNWKCNGT+EEVKKIVT LNEA                V LP VK+LLR+DF
Sbjct: 1   MARKFIVGGNWKCNGTTEEVKKIVTTLNEAEVPSEDVVEVVVSPPFVXLPVVKSLLRSDF 60

Query: 799 HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 620
           HVAAQNCWV+KGGAFTGEVSAEMLVNL IPWVILGHSERRALLNESN FVGDK AYALSQ
Sbjct: 61  HVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNNFVGDKVAYALSQ 120

Query: 619 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 440
           GLKVIACVGETLEQRE+GST++VVAAQTKAIA+ +S+W N+V+AYEPVWAIGTGKVA+PA
Sbjct: 121 GLKVIACVGETLEQRESGSTMAVVAAQTKAIADNISNWANVVLAYEPVWAIGTGKVATPA 180

Query: 439 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 260
           QAQEVHFELRKW+KENVGA+VA S RI+YGGSVNGAN KELA QPD+DGFLVGGASLKPE
Sbjct: 181 QAQEVHFELRKWLKENVGAEVAASTRIMYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240

Query: 259 FVDIIKSATVKSS 221
           F+DIIKSATVK +
Sbjct: 241 FIDIIKSATVKKN 253


>gb|ABB02628.1| triose phosphate isomerase cytosolic isoform-like [Solanum
           tuberosum]
          Length = 254

 Score =  407 bits (1045), Expect = e-111
 Identities = 202/253 (79%), Positives = 218/253 (86%)
 Frame = -1

Query: 979 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAXXXXXXXXXXXXXXXXVFLPFVKNLLRADF 800
           MGR FFVGGNWKCNGTSEE+KKIV  LN                  VFLP VKN LR+DF
Sbjct: 1   MGRTFFVGGNWKCNGTSEEIKKIVATLNAGQVPSQDVVEVVVSPPFVFLPLVKNELRSDF 60

Query: 799 HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 620
           HVAAQNCWVKKGGAFTGEVSA+MLVNLGIPWVILGHSERRA+L ESNEFVGDK AYALSQ
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSADMLVNLGIPWVILGHSERRAILGESNEFVGDKVAYALSQ 120

Query: 619 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 440
           GLKVIACVGETLEQRE+GST+ VVAAQTKAIAE+V DW+N+VVAYEPVWAIGTGKVASPA
Sbjct: 121 GLKVIACVGETLEQRESGSTMDVVAAQTKAIAERVKDWSNVVVAYEPVWAIGTGKVASPA 180

Query: 439 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 260
           QAQEVH ELRKW++ NV A+VA S RIIYGGSV+GAN KELAGQPD+DGFLVGGASLKPE
Sbjct: 181 QAQEVHAELRKWLQANVSAEVAASTRIIYGGSVSGANCKELAGQPDVDGFLVGGASLKPE 240

Query: 259 FVDIIKSATVKSS 221
           F+DIIK+A VK S
Sbjct: 241 FIDIIKAAEVKKS 253


>gb|AFL48185.1| triose phosphate isomerase cytosolic isoform-like protein [Capsicum
           annuum]
          Length = 254

 Score =  404 bits (1038), Expect = e-110
 Identities = 200/253 (79%), Positives = 217/253 (85%)
 Frame = -1

Query: 979 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAXXXXXXXXXXXXXXXXVFLPFVKNLLRADF 800
           MGRKFFVGGNWKCNGTS+E+KKI++ LN                  VFLP VKN LR DF
Sbjct: 1   MGRKFFVGGNWKCNGTSDEIKKIISTLNAGQVPSQDVVEVVVSPPFVFLPLVKNELRPDF 60

Query: 799 HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 620
           HVAAQNCWVKKGGAFTGEVSAEMLVNL IPWVILGHSERRALL ESNEFVGDK AYALSQ
Sbjct: 61  HVAAQNCWVKKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLGESNEFVGDKVAYALSQ 120

Query: 619 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 440
           GLKVIACVGETLEQRE+GST+ VVAAQTKAIA+ V DWTN+V+AYEPVWAIGTGKVA+PA
Sbjct: 121 GLKVIACVGETLEQRESGSTMDVVAAQTKAIADLVKDWTNVVIAYEPVWAIGTGKVATPA 180

Query: 439 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 260
           QAQEVH ELRKW++ NV A+VA S RIIYGGSV+GAN KELAGQPD+DGFLVGGASLKPE
Sbjct: 181 QAQEVHAELRKWLQANVSAEVAASTRIIYGGSVSGANCKELAGQPDVDGFLVGGASLKPE 240

Query: 259 FVDIIKSATVKSS 221
           F+DIIK+A VK S
Sbjct: 241 FIDIIKAAEVKKS 253


>gb|ABA46792.1| triosphosphate isomerase-like protein [Solanum tuberosum]
          Length = 257

 Score =  403 bits (1036), Expect = e-110
 Identities = 201/253 (79%), Positives = 219/253 (86%)
 Frame = -1

Query: 979 MGRKFFVGGNWKCNGTSEEVKKIVTLLNEAXXXXXXXXXXXXXXXXVFLPFVKNLLRADF 800
           M RKFFVGGNWKCNGT EEVKKIVT L+EA                VFLP VK LLR DF
Sbjct: 1   MARKFFVGGNWKCNGTVEEVKKIVTTLSEAEVPSEDVVEVVISPPFVFLPLVKTLLRRDF 60

Query: 799 HVAAQNCWVKKGGAFTGEVSAEMLVNLGIPWVILGHSERRALLNESNEFVGDKTAYALSQ 620
            +AAQNCWV+KGGAFTGEVSAEMLVNLGIPWVILGHSERR LLNESN+FV DK AYALSQ
Sbjct: 61  SIAAQNCWVRKGGAFTGEVSAEMLVNLGIPWVILGHSERRLLLNESNDFVADKVAYALSQ 120

Query: 619 GLKVIACVGETLEQREAGSTISVVAAQTKAIAEKVSDWTNIVVAYEPVWAIGTGKVASPA 440
           GLKVIACVGETLEQRE+GST++VVAAQTKAIAE+V  W+N+V+AYEPVWAIGTGKVA+PA
Sbjct: 121 GLKVIACVGETLEQRESGSTMAVVAAQTKAIAEQVMHWSNVVLAYEPVWAIGTGKVATPA 180

Query: 439 QAQEVHFELRKWIKENVGADVAGSVRIIYGGSVNGANSKELAGQPDIDGFLVGGASLKPE 260
           QAQEVHFELRKW+  NVGA+VA S RIIYGGSVNGAN KELA QPD+DGFLVGGASLKPE
Sbjct: 181 QAQEVHFELRKWLHVNVGAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 240

Query: 259 FVDIIKSATVKSS 221
           F+DIIKSATVK++
Sbjct: 241 FIDIIKSATVKTT 253


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