BLASTX nr result

ID: Coptis23_contig00002910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002910
         (1885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20950.3| unnamed protein product [Vitis vinifera]              482   e-133
ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger d...   482   e-133
ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|1...   480   e-133
gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]      476   e-132
ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger d...   470   e-130

>emb|CBI20950.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  482 bits (1240), Expect = e-133
 Identities = 210/265 (79%), Positives = 229/265 (86%), Gaps = 2/265 (0%)
 Frame = +3

Query: 1083 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINVERKLRHD 1256
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I V++  RHD
Sbjct: 30   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 89

Query: 1257 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 1436
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 90   IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 149

Query: 1437 XXXXENFFHCYKCGCCYSVHLKNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 1616
                ENFFHCYKC CCYSV LKNSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 150  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 209

Query: 1617 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 1796
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 210  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 269

Query: 1797 SEVQFHVVAQKCLSCNSYNTRQTRG 1871
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 270  SKVHFHVLAQKCLNCKSYNTRQTRG 294


>ref|XP_002284652.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1 [Vitis vinifera] gi|147785653|emb|CAN68688.1|
            hypothetical protein VITISV_029477 [Vitis vinifera]
          Length = 315

 Score =  482 bits (1240), Expect = e-133
 Identities = 210/265 (79%), Positives = 229/265 (86%), Gaps = 2/265 (0%)
 Frame = +3

Query: 1083 DDVNTTER--LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINVERKLRHD 1256
            D V  TE+  L +G+MQYGC HYRRRCRIRAPCCNEIFDCRHCHNEAKN+I V++  RHD
Sbjct: 51   DHVEITEKELLEKGYMQYGCPHYRRRCRIRAPCCNEIFDCRHCHNEAKNSIKVDKAQRHD 110

Query: 1257 LPRHEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXX 1436
            +PRH+VQQVICSLC TEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHCN      
Sbjct: 111  IPRHQVQQVICSLCNTEQEVRQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCNGCGICR 170

Query: 1437 XXXXENFFHCYKCGCCYSVHLKNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIH 1616
                ENFFHCYKC CCYSV LKNSHPCVEGAMHHDCPVCFEYLFES +D+TVMPCGHTIH
Sbjct: 171  IGGRENFFHCYKCRCCYSVLLKNSHPCVEGAMHHDCPVCFEYLFESTDDVTVMPCGHTIH 230

Query: 1617 MNCLKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGAT 1796
             NCLKEMR+HLQYACPLCSKSVCDMSKVWEK DMEIAA PMPE Y +K VWILCNDCG T
Sbjct: 231  QNCLKEMREHLQYACPLCSKSVCDMSKVWEKFDMEIAAIPMPEPYQNKMVWILCNDCGKT 290

Query: 1797 SEVQFHVVAQKCLSCNSYNTRQTRG 1871
            S+V FHV+AQKCL+C SYNTRQTRG
Sbjct: 291  SKVHFHVLAQKCLNCKSYNTRQTRG 315


>ref|XP_002309580.1| predicted protein [Populus trichocarpa] gi|118485648|gb|ABK94674.1|
            unknown [Populus trichocarpa] gi|222855556|gb|EEE93103.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  480 bits (1235), Expect = e-133
 Identities = 207/261 (79%), Positives = 230/261 (88%)
 Frame = +3

Query: 1086 DVNTTERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINVERKLRHDLPR 1265
            +V T + L++G M+YGC HYRRRCRIRAPCCNE+FDCRHCHNEAKNNINV++K RHD+PR
Sbjct: 39   NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 98

Query: 1266 HEVQQVICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXX 1445
            HEV+QVICSLCGTEQEV QVC+NCGVCMGKYFC+TCK +DDDTS+ QYHC+         
Sbjct: 99   HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCDGCGICRIGG 158

Query: 1446 XENFFHCYKCGCCYSVHLKNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNC 1625
             ENFFHCYKCGCCYS  LKNSHPCVEGAMHHDCPVCFE+LFESR D+TV+PCGHTIH +C
Sbjct: 159  PENFFHCYKCGCCYSNLLKNSHPCVEGAMHHDCPVCFEFLFESRYDVTVLPCGHTIHESC 218

Query: 1626 LKEMRQHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEV 1805
            LKEMR H QYACPLCSKSVCDMSKVWEK DMEIAATPMPE Y +K VWILCNDCG +SEV
Sbjct: 219  LKEMRDHYQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYLNKMVWILCNDCGKSSEV 278

Query: 1806 QFHVVAQKCLSCNSYNTRQTR 1868
            QFHVVAQKC++C SYNTRQTR
Sbjct: 279  QFHVVAQKCMNCKSYNTRQTR 299


>gb|ACN43326.1| zinc-finger transcription factor [Ananas comosus]
          Length = 305

 Score =  476 bits (1225), Expect = e-132
 Identities = 206/255 (80%), Positives = 227/255 (89%)
 Frame = +3

Query: 1101 ERLNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINVERKLRHDLPRHEVQQ 1280
            ERL++G MQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKN+INV+R+ RHD+PR ++QQ
Sbjct: 51   ERLDEGLMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNSINVDRRKRHDMPRQQLQQ 110

Query: 1281 VICSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFF 1460
            VICSLCGTEQEV QVC+NCGVCMGKYFC TCK +DDD S+ QYHCN          ENFF
Sbjct: 111  VICSLCGTEQEVRQVCINCGVCMGKYFCATCKLFDDDVSKQQYHCNGCGICRIGGRENFF 170

Query: 1461 HCYKCGCCYSVHLKNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMR 1640
            HCY+CGCCYS  LKNSH CVEGAMHHDCPVCFEYLFESR D++V+PCGHTIH++CLKEMR
Sbjct: 171  HCYRCGCCYSTILKNSHACVEGAMHHDCPVCFEYLFESRYDVSVLPCGHTIHVHCLKEMR 230

Query: 1641 QHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVV 1820
            +HLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPES+ +K V ILCNDCGATS+VQFHVV
Sbjct: 231  EHLQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESFQNKMVRILCNDCGATSQVQFHVV 290

Query: 1821 AQKCLSCNSYNTRQT 1865
            AQKC  C SYNTRQT
Sbjct: 291  AQKCQKCKSYNTRQT 305


>ref|XP_004136332.1| PREDICTED: RING finger and CHY zinc finger domain-containing protein
            1-like [Cucumis sativus] gi|449505475|ref|XP_004162482.1|
            PREDICTED: RING finger and CHY zinc finger
            domain-containing protein 1-like [Cucumis sativus]
          Length = 307

 Score =  470 bits (1209), Expect = e-130
 Identities = 200/255 (78%), Positives = 224/255 (87%)
 Frame = +3

Query: 1107 LNQGFMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEAKNNINVERKLRHDLPRHEVQQVI 1286
            L + +MQ+GC+HYRRRCRIRAPCCNEIFDCRHCHNE KN+I V++K RH++PRHEV QVI
Sbjct: 53   LEREYMQHGCAHYRRRCRIRAPCCNEIFDCRHCHNEIKNSICVDQKERHEIPRHEVNQVI 112

Query: 1287 CSLCGTEQEVGQVCVNCGVCMGKYFCKTCKFYDDDTSRSQYHCNXXXXXXXXXXENFFHC 1466
            CSLCGTEQEV Q C+NCGVC GKYFC++CK +DDDTS+ QYHCN          ENFFHC
Sbjct: 113  CSLCGTEQEVRQDCINCGVCFGKYFCESCKLFDDDTSKKQYHCNGCGICRIGGRENFFHC 172

Query: 1467 YKCGCCYSVHLKNSHPCVEGAMHHDCPVCFEYLFESRNDITVMPCGHTIHMNCLKEMRQH 1646
            +KCGCCYS+ LKNSHPCVEGAMHHDCPVCFEYLF+S ND+TVMPCGHTIH NCLKEMR H
Sbjct: 173  HKCGCCYSILLKNSHPCVEGAMHHDCPVCFEYLFDSTNDVTVMPCGHTIHQNCLKEMRDH 232

Query: 1647 LQYACPLCSKSVCDMSKVWEKLDMEIAATPMPESYHDKKVWILCNDCGATSEVQFHVVAQ 1826
             QYACPLCSKSVCDMSKVWEK+DMEIAATP+PE Y +K VWILCNDCG TS+VQ+HVVAQ
Sbjct: 233  FQYACPLCSKSVCDMSKVWEKIDMEIAATPIPEPYQNKMVWILCNDCGKTSKVQYHVVAQ 292

Query: 1827 KCLSCNSYNTRQTRG 1871
            KCL+C SYNTRQTRG
Sbjct: 293  KCLNCKSYNTRQTRG 307


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