BLASTX nr result

ID: Coptis23_contig00002904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002904
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284609.1| PREDICTED: centromere protein S [Vitis vinif...   168   1e-39
ref|XP_002321749.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
emb|CBI15755.3| unnamed protein product [Vitis vinifera]              164   3e-38
ref|XP_004145141.1| PREDICTED: centromere protein S-like isoform...   159   9e-37
ref|NP_199906.1| Histone 2A domain-containing protein [Arabidops...   157   3e-36

>ref|XP_002284609.1| PREDICTED: centromere protein S [Vitis vinifera]
           gi|147791927|emb|CAN67893.1| hypothetical protein
           VITISV_040390 [Vitis vinifera]
          Length = 135

 Score =  168 bits (426), Expect = 1e-39
 Identities = 81/116 (69%), Positives = 104/116 (89%), Gaps = 2/116 (1%)
 Frame = +3

Query: 153 TDILRDRFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRK 332
           T++LRDRF LS +SI E++AKK+DMEIS+P++ACI+DLAF++TEQL KDLELF+QHA RK
Sbjct: 17  TELLRDRFRLSTISIVEAQAKKSDMEISEPIVACISDLAFKYTEQLAKDLELFSQHAGRK 76

Query: 333 SVNMEDVILSAHRNEHLAASLRSFCHELKGKEPQSERKRKKASK--DKPASDILHI 494
           +VNMEDVILSAHRN+HLA+SLRSFC++LK KE  SERKRKKAS+  DK ++ ++HI
Sbjct: 77  TVNMEDVILSAHRNKHLASSLRSFCNDLKAKEIPSERKRKKASRKEDKASTSVVHI 132


>ref|XP_002321749.1| predicted protein [Populus trichocarpa] gi|222868745|gb|EEF05876.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  164 bits (416), Expect = 2e-38
 Identities = 83/117 (70%), Positives = 99/117 (84%), Gaps = 2/117 (1%)
 Frame = +3

Query: 150 VTDILRDRFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASR 329
           V+DIL+DRF LSA+SIAE+EAKKN +EIS+P+ +CIADLA  +TEQL K+LE FAQHA R
Sbjct: 17  VSDILQDRFRLSAISIAENEAKKNGVEISEPITSCIADLALNYTEQLAKELEAFAQHAGR 76

Query: 330 KSVNMEDVILSAHRNEHLAASLRSFCHELKGKEPQSERKRKKASK--DKPASDILHI 494
           KSVNMEDVILSAHRNEHL A LRSFC++LK KEPQSERKR+K SK  DK  +  ++I
Sbjct: 77  KSVNMEDVILSAHRNEHLTALLRSFCNDLKEKEPQSERKRRKTSKKEDKATTSAVNI 133


>emb|CBI15755.3| unnamed protein product [Vitis vinifera]
          Length = 136

 Score =  164 bits (414), Expect = 3e-38
 Identities = 81/117 (69%), Positives = 104/117 (88%), Gaps = 3/117 (2%)
 Frame = +3

Query: 153 TDILRDRFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFT-EQLGKDLELFAQHASR 329
           T++LRDRF LS +SI E++AKK+DMEIS+P++ACI+DLAF++T EQL KDLELF+QHA R
Sbjct: 17  TELLRDRFRLSTISIVEAQAKKSDMEISEPIVACISDLAFKYTAEQLAKDLELFSQHAGR 76

Query: 330 KSVNMEDVILSAHRNEHLAASLRSFCHELKGKEPQSERKRKKASK--DKPASDILHI 494
           K+VNMEDVILSAHRN+HLA+SLRSFC++LK KE  SERKRKKAS+  DK ++ ++HI
Sbjct: 77  KTVNMEDVILSAHRNKHLASSLRSFCNDLKAKEIPSERKRKKASRKEDKASTSVVHI 133


>ref|XP_004145141.1| PREDICTED: centromere protein S-like isoform 1 [Cucumis sativus]
           gi|449454800|ref|XP_004145142.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
           gi|449473866|ref|XP_004154006.1| PREDICTED: centromere
           protein S-like isoform 1 [Cucumis sativus]
           gi|449473870|ref|XP_004154007.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
           gi|449523429|ref|XP_004168726.1| PREDICTED: centromere
           protein S-like isoform 1 [Cucumis sativus]
           gi|449523431|ref|XP_004168727.1| PREDICTED: centromere
           protein S-like isoform 2 [Cucumis sativus]
          Length = 129

 Score =  159 bits (401), Expect = 9e-37
 Identities = 80/116 (68%), Positives = 97/116 (83%), Gaps = 1/116 (0%)
 Frame = +3

Query: 153 TDILRDRFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRK 332
           +++LRDRF LS++SIAE+EA K+ MEIS+PVM C+ADLAF++T+QL KDLELFAQHA RK
Sbjct: 12  SELLRDRFRLSSISIAEAEANKSGMEISEPVMTCVADLAFKYTKQLAKDLELFAQHAGRK 71

Query: 333 SVNMEDVILSAHRNEHLAASLRSFCHELKGKEPQSERKRKKA-SKDKPASDILHIS 497
           SVN EDVIL+AHRNEHLAA L S C++LK KEPQSERKRKKA  KD      +HI+
Sbjct: 72  SVNTEDVILTAHRNEHLAAILTSICNDLKTKEPQSERKRKKAPKKDDRDRGAVHIA 127


>ref|NP_199906.1| Histone 2A domain-containing protein [Arabidopsis thaliana]
           gi|9758240|dbj|BAB08739.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008629|gb|AED96012.1|
           Histone 2A domain-containing protein [Arabidopsis
           thaliana]
          Length = 242

 Score =  157 bits (397), Expect = 3e-36
 Identities = 76/105 (72%), Positives = 90/105 (85%)
 Frame = +3

Query: 156 DILRDRFHLSAVSIAESEAKKNDMEISQPVMACIADLAFQFTEQLGKDLELFAQHASRKS 335
           D++RDRF LSA+SIAE+EAKKN MEI  PV+AC+ADLAF++ E + KDLELFA HA RK 
Sbjct: 122 DLIRDRFRLSAISIAEAEAKKNGMEIGGPVVACVADLAFKYAENVAKDLELFAHHAGRKV 181

Query: 336 VNMEDVILSAHRNEHLAASLRSFCHELKGKEPQSERKRKKASKDK 470
           VNM+DV+LSAHRN++LAASLRS C+ELK KEPQSERKRKK S  K
Sbjct: 182 VNMDDVVLSAHRNDNLAASLRSLCNELKAKEPQSERKRKKGSAKK 226


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