BLASTX nr result

ID: Coptis23_contig00002889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002889
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplast...   197   2e-48
emb|CBI27216.3| unnamed protein product [Vitis vinifera]              197   2e-48
emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]   197   2e-48
ref|XP_002532138.1| conserved hypothetical protein [Ricinus comm...   192   6e-47
ref|XP_003594851.1| Allantoate amidohydrolase [Medicago truncatu...   187   2e-45

>ref|XP_002275843.2| PREDICTED: allantoate deiminase, chloroplastic-like [Vitis
           vinifera]
          Length = 492

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/166 (60%), Positives = 118/166 (71%)
 Frame = +3

Query: 3   VTFSVDIRAMDDMAREAIIYELSKRMYEACERRSVHCVIEXXXXXXXXXXXXXXXXXXXX 182
           VTF+VD+RA+DDM REA++YELS RMY+ CE+RSV C IE                    
Sbjct: 357 VTFTVDLRAIDDMGREAVLYELSDRMYQICEKRSVSCTIERK------------------ 398

Query: 183 XXXXXXXXXXXXHNAEAVLCDNELSSRLKSASYSALKRVAGEVPDDVPVLMSGAGHDAMP 362
                       H+A AV+CD ELS++LKSA+YS LKR+ GE+  DVPVLMSGAGHDAM 
Sbjct: 399 ------------HDANAVICDTELSTQLKSATYSTLKRMEGEIQGDVPVLMSGAGHDAMA 446

Query: 363 MSHLSKVGMLFVRCRGGISHSPMEHVTDDDVWVAGLAILEFLETNL 500
           MSHL+KVGMLFVRCRGGISHSP EHV D+DVW AGLAIL FLET+L
Sbjct: 447 MSHLTKVGMLFVRCRGGISHSPAEHVLDEDVWAAGLAILAFLETHL 492


>emb|CBI27216.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/166 (60%), Positives = 118/166 (71%)
 Frame = +3

Query: 3   VTFSVDIRAMDDMAREAIIYELSKRMYEACERRSVHCVIEXXXXXXXXXXXXXXXXXXXX 182
           VTF+VD+RA+DDM REA++YELS RMY+ CE+RSV C IE                    
Sbjct: 343 VTFTVDLRAIDDMGREAVLYELSDRMYQICEKRSVSCTIERK------------------ 384

Query: 183 XXXXXXXXXXXXHNAEAVLCDNELSSRLKSASYSALKRVAGEVPDDVPVLMSGAGHDAMP 362
                       H+A AV+CD ELS++LKSA+YS LKR+ GE+  DVPVLMSGAGHDAM 
Sbjct: 385 ------------HDANAVICDTELSTQLKSATYSTLKRMEGEIQGDVPVLMSGAGHDAMA 432

Query: 363 MSHLSKVGMLFVRCRGGISHSPMEHVTDDDVWVAGLAILEFLETNL 500
           MSHL+KVGMLFVRCRGGISHSP EHV D+DVW AGLAIL FLET+L
Sbjct: 433 MSHLTKVGMLFVRCRGGISHSPAEHVLDEDVWAAGLAILAFLETHL 478


>emb|CAN83127.1| hypothetical protein VITISV_029535 [Vitis vinifera]
          Length = 321

 Score =  197 bits (502), Expect = 2e-48
 Identities = 101/166 (60%), Positives = 118/166 (71%)
 Frame = +3

Query: 3   VTFSVDIRAMDDMAREAIIYELSKRMYEACERRSVHCVIEXXXXXXXXXXXXXXXXXXXX 182
           VTF+VD+RA+DDM REA++YELS RMY+ CE+RSV C IE                    
Sbjct: 186 VTFTVDLRAIDDMGREAVLYELSDRMYQICEKRSVSCTIERK------------------ 227

Query: 183 XXXXXXXXXXXXHNAEAVLCDNELSSRLKSASYSALKRVAGEVPDDVPVLMSGAGHDAMP 362
                       H+A AV+CD ELS++LKSA+YS LKR+ GE+  DVPVLMSGAGHDAM 
Sbjct: 228 ------------HDANAVICDTELSTQLKSATYSTLKRMEGEIQGDVPVLMSGAGHDAMA 275

Query: 363 MSHLSKVGMLFVRCRGGISHSPMEHVTDDDVWVAGLAILEFLETNL 500
           MSHL+KVGMLFVRCRGGISHSP EHV D+DVW AGLAIL FLET+L
Sbjct: 276 MSHLTKVGMLFVRCRGGISHSPAEHVLDEDVWAAGLAILAFLETHL 321


>ref|XP_002532138.1| conserved hypothetical protein [Ricinus communis]
           gi|223528174|gb|EEF30237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score =  192 bits (489), Expect = 6e-47
 Identities = 96/166 (57%), Positives = 118/166 (71%)
 Frame = +3

Query: 3   VTFSVDIRAMDDMAREAIIYELSKRMYEACERRSVHCVIEXXXXXXXXXXXXXXXXXXXX 182
           VTF+VD+RAMDDM R+A++YELS R+Y+ C+RRSV C+IE                    
Sbjct: 301 VTFTVDLRAMDDMGRDAVLYELSNRIYQICDRRSVSCIIERK------------------ 342

Query: 183 XXXXXXXXXXXXHNAEAVLCDNELSSRLKSASYSALKRVAGEVPDDVPVLMSGAGHDAMP 362
                       H+A+AV CD ELSS+LK A+ +ALKR+ GE+ DD+P LMSGAGHDAM 
Sbjct: 343 ------------HDAQAVSCDPELSSQLKLAANAALKRMTGEIQDDIPTLMSGAGHDAMA 390

Query: 363 MSHLSKVGMLFVRCRGGISHSPMEHVTDDDVWVAGLAILEFLETNL 500
           MSHL+KVGMLFVRCRGGISHSP EHV DDD+W AGLAI+ FLET++
Sbjct: 391 MSHLTKVGMLFVRCRGGISHSPAEHVMDDDIWAAGLAIVAFLETHM 436


>ref|XP_003594851.1| Allantoate amidohydrolase [Medicago truncatula]
           gi|355483899|gb|AES65102.1| Allantoate amidohydrolase
           [Medicago truncatula]
          Length = 568

 Score =  187 bits (476), Expect = 2e-45
 Identities = 96/163 (58%), Positives = 115/163 (70%)
 Frame = +3

Query: 3   VTFSVDIRAMDDMAREAIIYELSKRMYEACERRSVHCVIEXXXXXXXXXXXXXXXXXXXX 182
           VT++VDIRA+DD+ REA+IY+LS R+Y+ C++RSV CVIE                    
Sbjct: 434 VTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCVIEHK------------------ 475

Query: 183 XXXXXXXXXXXXHNAEAVLCDNELSSRLKSASYSALKRVAGEVPDDVPVLMSGAGHDAMP 362
                       H+A AV+CD ELSS+LKSA+YSALKR+ G++ D+VP LMSGAGHDAM 
Sbjct: 476 ------------HDAGAVICDPELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMA 523

Query: 363 MSHLSKVGMLFVRCRGGISHSPMEHVTDDDVWVAGLAILEFLE 491
           MSHL+KVGMLFVRCRGGISHSP E V DDDVW AGLA L FLE
Sbjct: 524 MSHLTKVGMLFVRCRGGISHSPQEDVLDDDVWAAGLATLSFLE 566


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