BLASTX nr result

ID: Coptis23_contig00002879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002879
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23166.3| unnamed protein product [Vitis vinifera]              112   2e-22
ref|XP_002518540.1| conserved hypothetical protein [Ricinus comm...   103   7e-20
ref|XP_003556023.1| PREDICTED: uncharacterized protein LOC100791...   102   2e-19
ref|NP_001236388.1| uncharacterized protein LOC100527205 [Glycin...   101   3e-19
ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-19

>emb|CBI23166.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  112 bits (279), Expect = 2e-22
 Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
 Frame = -1

Query: 943 ENIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNLSRKGSQRAE 764
           + I V DQ       TE SDSF+VD+E       ++ ++NSRI+  LQR+LSRKGSQR  
Sbjct: 7   QKILVSDQVNGFQYKTEKSDSFVVDMEGFPNGVNKDTTANSRIT--LQRSLSRKGSQRGG 64

Query: 763 RNKTTLASSGVTDESSDGSKTAGTLSTGGCNPDKSTPAPVMSSGSKELLSKQP-----QQ 599
             K    +S   D     S     L+ GG   +K     V ++ +   +   P       
Sbjct: 65  EKKPNSVASIDADAVLATSSPRAALA-GGSTLEKPVAVVVAAAAAGGTIDHHPVGSQVHH 123

Query: 598 AITITA-------ENRFNCRR-SFKQRTSASIIDPRRVLFYFATLSSMGTLLLIYFTLSI 443
            I ITA       E+RF  RR SF++ + + +IDPRR+LF+FATLSSMGT+LLIYFTLSI
Sbjct: 124 HIAITAGNISTITESRFISRRYSFRRASPSWLIDPRRILFFFATLSSMGTILLIYFTLSI 183

Query: 442 TKFSGDNT 419
            +  GD+T
Sbjct: 184 KRLGGDDT 191


>ref|XP_002518540.1| conserved hypothetical protein [Ricinus communis]
           gi|223542385|gb|EEF43927.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 214

 Score =  103 bits (258), Expect = 7e-20
 Identities = 72/191 (37%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
 Frame = -1

Query: 955 DMGMENIAVCDQEESSLDTTEMSDSFIVDIENLSQDTV-QEISSNSRISVKLQRNLSRKG 779
           +MG + I+V D       + E SD+F++D+E+ S  T  +E++ NSRI+  LQR+LSRKG
Sbjct: 25  NMGTQKISVLDHINGFEYSAEKSDNFVIDMESFSHATNNKEVNPNSRIT--LQRSLSRKG 82

Query: 778 SQRAERNKTTLASSGVTDESSDGSKTAGTLSTGGCNPDKSTPAPVMSSGSKELLSKQPQ- 602
           S R            +    S   + A   ++    P       ++S G+ +  S   Q 
Sbjct: 83  SLRMSGRG---GDKKINSNPSPNDRDAAVATSSPRGPGMPEKGSMVSVGTADHPSSSAQV 139

Query: 601 -QAITITAENRFNC----------RRSFKQRTSASIIDPRRVLFYFATLSSMGTLLLIYF 455
              ITIT  N  N           R SFK+ + +  IDP+RVLF+FATLSSMGT+LLIYF
Sbjct: 140 HHQITITTTNNLNASSTEGRCTIRRNSFKRPSLSWTIDPKRVLFFFATLSSMGTMLLIYF 199

Query: 454 TLSITKFSGDN 422
           TLSI K   D+
Sbjct: 200 TLSIGKLGADD 210


>ref|XP_003556023.1| PREDICTED: uncharacterized protein LOC100791649 [Glycine max]
          Length = 219

 Score =  102 bits (253), Expect = 2e-19
 Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
 Frame = -1

Query: 970 ETEFGDMGMENIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEIS-SNSRISVKLQRN 794
           E+E  +MG + I V D       + E +DSF++D+++ S    ++ + +NSRI+  LQR+
Sbjct: 22  ESEQKNMGTQRILVSDHTNGYQYSAEEADSFVIDMDSFSSGINKDSTKANSRIT--LQRS 79

Query: 793 LSRKGSQRAERNKTTLASSGVTDESSDGSKTAGTLST---GGCNPDKSTPAPVMSSGSKE 623
           LSRKGSQR    K    +  VT    D + T  +      G C  +KS  A V    +  
Sbjct: 80  LSRKGSQRGGDRKV---NGNVTLHDRDTAPTTCSPKAALAGSCTAEKS--AVVAVGSTHH 134

Query: 622 LLSKQPQQAITITAEN-----------RFNCRRSFKQRTSASIIDPRRVLFYFATLSSMG 476
             + Q    ITITA N           +F  RR+  +R S+ ++DP+RVL  FATLSSMG
Sbjct: 135 STNTQVHHQITITASNMCTTTPTPNESKFITRRNSFKRPSSWLLDPKRVLLLFATLSSMG 194

Query: 475 TLLLIYFTLSITKFSGD 425
           T+LLIYFTL+I+K   D
Sbjct: 195 TMLLIYFTLTISKQKAD 211


>ref|NP_001236388.1| uncharacterized protein LOC100527205 [Glycine max]
           gi|255631780|gb|ACU16257.1| unknown [Glycine max]
          Length = 214

 Score =  101 bits (252), Expect = 3e-19
 Identities = 70/192 (36%), Positives = 108/192 (56%), Gaps = 14/192 (7%)
 Frame = -1

Query: 970 ETEFGDMGMENIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNL 791
           E+E  +MG + I V D   +   + E +DSF++D+++ S   + + S+N+   + LQR+L
Sbjct: 22  ESEEKNMGTQRILVSDHINAYQYSAEEADSFVIDMDSFSSG-INKDSNNANSRITLQRSL 80

Query: 790 SRKGSQRAERNKTTLASSGVTDESSDGSKTAGTLST---GGCNPDKSTPAPVMSSGSKEL 620
           SRKGSQR    K    +  VT    D + T  +      G C  +KS  A V    +   
Sbjct: 81  SRKGSQRGGDRKV---NGNVTLHDRDTAPTTCSPKAALAGSCTAEKS--AVVAVGSTHHS 135

Query: 619 LSKQPQQAITITA-----------ENRFNCRRSFKQRTSASIIDPRRVLFYFATLSSMGT 473
            + Q +  ITITA           E++   RR+  +R+S+ ++DP+RVL +FATLSSMGT
Sbjct: 136 TNTQVRHQITITASSMCTTTTPTTESKCITRRNSFKRSSSWLLDPKRVLLFFATLSSMGT 195

Query: 472 LLLIYFTLSITK 437
           +LLIYFTL+++K
Sbjct: 196 MLLIYFTLTLSK 207


>ref|XP_002305617.1| predicted protein [Populus trichocarpa] gi|222848581|gb|EEE86128.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  100 bits (250), Expect = 6e-19
 Identities = 72/184 (39%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
 Frame = -1

Query: 952 MGMENIAVCDQEESSLDTTEMSDSFIVDIENLSQDTVQEISSNSRISVKLQRNLSRKGSQ 773
           M  + + V D+ +    T E SDSFI+D+E+ S    ++I++N RI+  LQRNLSRKGS 
Sbjct: 16  MEAQKLTVLDRIDGFQYTKEKSDSFIIDMESFSHGINKDINTNQRIT--LQRNLSRKGSP 73

Query: 772 RAERNKTTLASSGVTDESSDGSKTAGTLSTGGCNPDKSTPAPVMSSGSKELLSK-QPQQA 596
           R                  D      + S  G  P     A V++ G+ +  S  Q    
Sbjct: 74  RGGGGGGEKKIHSNLSHLCDKEAIVASASPRG--PSTPEKAAVVTVGTPDHSSSPQVHHQ 131

Query: 595 ITITA-------ENRFNCRRSFKQRTSASIIDPRRVLFYFATLSSMGTLLLIYFTLSITK 437
           ITIT        E R   R SFK+ + + ++DP+RVLF+FATLSSMGT+LLIY TLSI K
Sbjct: 132 ITITTGSINGTPEGRCIRRNSFKRASPSWVLDPKRVLFFFATLSSMGTMLLIYLTLSIGK 191

Query: 436 FSGD 425
              D
Sbjct: 192 LKTD 195


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