BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002872
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Viti...   247   6e-63
ref|XP_002273834.1| PREDICTED: transcription factor bHLH30-like ...   246   1e-62
ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Viti...   245   2e-62
ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|2...   228   3e-57
ref|XP_004163475.1| PREDICTED: putative transcription factor bHL...   224   4e-56

>ref|XP_002274955.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 263

 Score =  247 bits (630), Expect = 6e-63
 Identities = 135/262 (51%), Positives = 177/262 (67%), Gaps = 3/262 (1%)
 Frame = -2

Query: 975 NWNSGNT---NIARLFDGFVGNNNTSLGHGVGALLSSTTTLVLDNERGELVRGNGKVGQK 805
           +WNS ++   +  ++FD F  N     G   G       +LVLD++RGELV+      +K
Sbjct: 5   SWNSASSRGSDCFQVFDPFSHNTGGDRGVVRGG------SLVLDSDRGELVKAPVIKVKK 58

Query: 804 GKCEGKSIVALKNHSDAERRRRERINSHLNSLRSFVPCSEKMDKASLLAEVIDHVKELKR 625
              E K++ ALK+HSDAERRRRERIN+HL++LR FVPC+EKMDKA+LLAEVI  VKELKR
Sbjct: 59  EVPEAKAMAALKSHSDAERRRRERINAHLDTLRGFVPCTEKMDKATLLAEVIQQVKELKR 118

Query: 624 TTAEACKGFVIPMDVDEVRVEPHEDAMDGSFCIKVYLCCEDRPEIFSDLREALKTFNLKT 445
              +A KG ++P++ DEVRVEPH+D  DG+F ++  +CC+ RPE+ S +++AL T  + T
Sbjct: 119 NATKASKGLLLPIEEDEVRVEPHDDRTDGAFSLRASVCCDYRPELLSYIKQALDTLPINT 178

Query: 444 VKAEISTLGGRMKTVFVMTGFKIENIDDPEVRRLLTASVHQALTSILEKYSGSPELSPRV 265
           VKAEISTLGGRMK VFV T  K  N +D +   LL +SVHQAL+SIL K S SPE SPR 
Sbjct: 179 VKAEISTLGGRMKNVFVFTSCKQGNSNDSKAHMLLASSVHQALSSILYKVSTSPEFSPRT 238

Query: 264 LLSNKKRRLSPFEXXXXXX*EQ 199
               K+RR+S F+       EQ
Sbjct: 239 THPKKRRRVSIFDSSSSSSSEQ 260


>ref|XP_002273834.1| PREDICTED: transcription factor bHLH30-like [Vitis vinifera]
          Length = 258

 Score =  246 bits (627), Expect = 1e-62
 Identities = 131/251 (52%), Positives = 177/251 (70%), Gaps = 1/251 (0%)
 Frame = -2

Query: 975 NWNSGNTNIARLFDGFVGNNNTSLGHGVGALLSSTTTLVLDNERGELVRGNGKVGQKGKC 796
           +WNS +++ +  F  +   +    G+G G L   +  LVLD+E+ ELV+   +  +KG  
Sbjct: 5   SWNSRSSHGSDFFQVYDPFSQNKGGYG-GVLRGGS--LVLDSEKRELVKAPVRAVKKGVS 61

Query: 795 EGKSIVALKNHSDAERRRRERINSHLNSLRSFVPCSEKMDKASLLAEVIDHVKELKRTTA 616
           E K++ ALKNHS+AERRRRERIN HL++LR FVPC+EKMDKA+LLAEVI  VKELK+  A
Sbjct: 62  EAKAMAALKNHSEAERRRRERINGHLSTLRGFVPCTEKMDKATLLAEVIQQVKELKKNAA 121

Query: 615 EACKGFVIPMDVDEVRVEPHEDAM-DGSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVK 439
           EA KG ++PM+VDEVRVEPH+D   DG+      +CC+  P + SD+R+AL T N+ TVK
Sbjct: 122 EASKGLLLPMEVDEVRVEPHDDGTGDGTSYFMASVCCDYSPRLLSDIRQALDTLNITTVK 181

Query: 438 AEISTLGGRMKTVFVMTGFKIENIDDPEVRRLLTASVHQALTSILEKYSGSPELSPRVLL 259
           AEIS+LGGRMK++F+ T  K    +D E  RLL +SVHQAL+S+L+K S + E SPR   
Sbjct: 182 AEISSLGGRMKSMFIFTSCKKHKSNDSEAHRLLASSVHQALSSVLDKVSVTAEFSPRTPH 241

Query: 258 SNKKRRLSPFE 226
            NK+RR+S F+
Sbjct: 242 PNKRRRVSFFD 252


>ref|XP_002280074.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
          Length = 259

 Score =  245 bits (626), Expect = 2e-62
 Identities = 133/249 (53%), Positives = 175/249 (70%), Gaps = 5/249 (2%)
 Frame = -2

Query: 960 NTNIARLFDGFVGNNNTSLGHGVGALL----SSTTTLVLDNERGELVRGNGKVGQKGKCE 793
           +T+     DGF  N+      G GA++    SS++ LVLD+ERGELVR   ++G      
Sbjct: 5   STDFPGFSDGFSENS------GYGAIIRGGSSSSSLLVLDSERGELVRAPARLGPNEVKA 58

Query: 792 GKSIVALKNHSDAERRRRERINSHLNSLRSFVPCSEKMDKASLLAEVIDHVKELKRTTAE 613
            K++VALKNHS+AERRRR RIN+HL +LR  +P ++KMDKASLL EV+ H+KELKR+ AE
Sbjct: 59  EKAMVALKNHSEAERRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAE 118

Query: 612 ACKGFVIPMDVDEVRVEPHEDAMD-GSFCIKVYLCCEDRPEIFSDLREALKTFNLKTVKA 436
             KGF++PMD+DEVRVE  E  +D   + IK  LCC+ +P + SDLR AL T +LKTV+A
Sbjct: 119 ISKGFLVPMDIDEVRVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRA 178

Query: 435 EISTLGGRMKTVFVMTGFKIENIDDPEVRRLLTASVHQALTSILEKYSGSPELSPRVLLS 256
           EI+TLGGRMK VFVMTG K  N++D E R+L   SVHQAL S+L+K+  S + S R   S
Sbjct: 179 EIATLGGRMKNVFVMTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSS 238

Query: 255 NKKRRLSPF 229
           NK++R+S F
Sbjct: 239 NKRQRISIF 247


>ref|XP_002325576.1| predicted protein [Populus trichocarpa] gi|222862451|gb|EEE99957.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  228 bits (581), Expect = 3e-57
 Identities = 125/254 (49%), Positives = 170/254 (66%), Gaps = 4/254 (1%)
 Frame = -2

Query: 975 NWNSGN---TNIARLFDGFVGNNNTSLGHGVGALLSSTTTLVLDNERGELVRGNGKVGQK 805
           +WNS     ++   + DGF+ N         G   SST++LVLDNERGELV    ++ +K
Sbjct: 5   SWNSTRVQASDFEGMSDGFLVNTGLQAKTRTGP--SSTSSLVLDNERGELVEATVRMERK 62

Query: 804 GKCEGKSIVALKNHSDAERRRRERINSHLNSLRSFVPCSEKMDKASLLAEVIDHVKELKR 625
           G    +SI ALKNHS+AE++RR RIN+HL++LRS VP + KMDKASLLAEVI H+KELKR
Sbjct: 63  GVAAERSIAALKNHSEAEKKRRARINAHLDTLRSLVPGTRKMDKASLLAEVIAHLKELKR 122

Query: 624 TTAEACKGFVIPMDVDEVRVEPHEDA-MDGSFCIKVYLCCEDRPEIFSDLREALKTFNLK 448
              EA +G ++P+D+DEVRVE  ED  +   + I+  +CC+ +P I SDLR+AL   +L 
Sbjct: 123 QATEASEGLLMPLDIDEVRVEQQEDGLLSAPYVIRASICCDCKPGILSDLRQALDALHLI 182

Query: 447 TVKAEISTLGGRMKTVFVMTGFKIENIDDPEVRRLLTASVHQALTSILEKYSGSPELSPR 268
            +KAEI+TL GRMK VFVM+  K  +  D +V + L  S+HQA  SIL+K+S S E   +
Sbjct: 183 IMKAEIATLEGRMKNVFVMSSCKEGDSGDAKVHQFLAGSIHQAFRSILDKFSASQEFLLK 242

Query: 267 VLLSNKKRRLSPFE 226
             LSNK+RR+  F+
Sbjct: 243 STLSNKRRRVDSFK 256


>ref|XP_004163475.1| PREDICTED: putative transcription factor bHLH107-like [Cucumis
           sativus]
          Length = 255

 Score =  224 bits (571), Expect = 4e-56
 Identities = 120/222 (54%), Positives = 154/222 (69%)
 Frame = -2

Query: 891 GALLSSTTTLVLDNERGELVRGNGKVGQKGKCEGKSIVALKNHSDAERRRRERINSHLNS 712
           G++LS +  LVL+ E+GELV+   +  +K   E K++ ALKNHS+AERRRRERINSHL++
Sbjct: 29  GSILSQS--LVLNGEKGELVKAPIQTSKKRVSEEKALAALKNHSEAERRRRERINSHLST 86

Query: 711 LRSFVPCSEKMDKASLLAEVIDHVKELKRTTAEACKGFVIPMDVDEVRVEPHEDAMDGSF 532
           LR  VPC  K DKA+LLAEV+  VKELK+  AEA  G  +PMD DEV VEP+    +G  
Sbjct: 87  LRGLVPCPLKRDKATLLAEVVRQVKELKKKAAEASNGVFVPMDTDEVNVEPYGVGANGDM 146

Query: 531 CIKVYLCCEDRPEIFSDLREALKTFNLKTVKAEISTLGGRMKTVFVMTGFKIENIDDPEV 352
             K  LCCE RPE+ SDL++ L + +LK VKAEISTLG R+K +F+ T    +N D PE 
Sbjct: 147 SFKATLCCEYRPELLSDLKQTLDSLHLKLVKAEISTLGNRVKNIFIFTSAIADNGDHPEA 206

Query: 351 RRLLTASVHQALTSILEKYSGSPELSPRVLLSNKKRRLSPFE 226
            R L +SVHQA++ +LEK S SPE SPR  L  K+RRLS  +
Sbjct: 207 SRHLASSVHQAISFVLEKAS-SPEYSPRTTLPMKRRRLSSLD 247