BLASTX nr result

ID: Coptis23_contig00002860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002860
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810...   207   6e-52
ref|XP_002527343.1| conserved hypothetical protein [Ricinus comm...   202   2e-50
ref|XP_002527215.1| DNA binding protein, putative [Ricinus commu...   201   5e-50
ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782...   200   9e-50
ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49

>ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810300 [Glycine max]
          Length = 852

 Score =  207 bits (528), Expect = 6e-52
 Identities = 94/123 (76%), Positives = 106/123 (86%)
 Frame = -1

Query: 377 MNEDVFLEEAVARYKGFLHMIKRNKERSIKRFCVPTYDIDVIWHSHQLHPVSYCKDLVEV 198
           M  D+F++EAVARYKGFLH+IKRNKE+ IKRFCVPTYDID+IWHSHQLHPV+YCKDL E 
Sbjct: 183 MKNDLFIKEAVARYKGFLHLIKRNKEKGIKRFCVPTYDIDLIWHSHQLHPVAYCKDLNEA 242

Query: 197 LGQILEHDDTDSDRTKGQKLDTGFSGTTMHWENTFGSRYWIAGGMYRGVAPSPVTVIPLL 18
           LG++LEHDDTDSDRTKG+KLD GFSGTT  WE TFG+RYW AG MYRG APSP+T  P  
Sbjct: 243 LGKVLEHDDTDSDRTKGKKLDLGFSGTTRQWEVTFGTRYWKAGAMYRGNAPSPITSNPFP 302

Query: 17  SKI 9
           S I
Sbjct: 303 SSI 305


>ref|XP_002527343.1| conserved hypothetical protein [Ricinus communis]
           gi|223533262|gb|EEF35015.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 609

 Score =  202 bits (514), Expect = 2e-50
 Identities = 89/112 (79%), Positives = 103/112 (91%)
 Frame = -1

Query: 377 MNEDVFLEEAVARYKGFLHMIKRNKERSIKRFCVPTYDIDVIWHSHQLHPVSYCKDLVEV 198
           MN+D FL+E+VARYKGFLH+IKRN+ERSI++FCVPTYDID+IWHSHQLHPV+YCKDLV +
Sbjct: 183 MNDDSFLQESVARYKGFLHLIKRNQERSIRQFCVPTYDIDLIWHSHQLHPVAYCKDLVAI 242

Query: 197 LGQILEHDDTDSDRTKGQKLDTGFSGTTMHWENTFGSRYWIAGGMYRGVAPS 42
           +G++LEHDDTDSDRTKG+KLDTGFSGTT  W  TFGSRYW AG MYRG APS
Sbjct: 243 IGRVLEHDDTDSDRTKGKKLDTGFSGTTKQWGETFGSRYWRAGAMYRGRAPS 294


>ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis]
           gi|223533391|gb|EEF35141.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 871

 Score =  201 bits (511), Expect = 5e-50
 Identities = 89/123 (72%), Positives = 105/123 (85%)
 Frame = -1

Query: 377 MNEDVFLEEAVARYKGFLHMIKRNKERSIKRFCVPTYDIDVIWHSHQLHPVSYCKDLVEV 198
           ++ D+FLEEAV RYKGFL++IKRN E+S++RFCVPTYDID+IWH+HQLHP+SYCKDL E 
Sbjct: 182 VSNDIFLEEAVNRYKGFLYLIKRNIEQSVRRFCVPTYDIDLIWHTHQLHPISYCKDLSEA 241

Query: 197 LGQILEHDDTDSDRTKGQKLDTGFSGTTMHWENTFGSRYWIAGGMYRGVAPSPVTVIPLL 18
           LG+ILEHDD DSDRTKG+KLD GFSGTT  WE TFG+RYW AG MYRG  PSP+T+  LL
Sbjct: 242 LGKILEHDDMDSDRTKGKKLDVGFSGTTKQWEETFGTRYWKAGAMYRGSGPSPLTITSLL 301

Query: 17  SKI 9
             I
Sbjct: 302 PNI 304


>ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782361 [Glycine max]
          Length = 827

 Score =  200 bits (509), Expect = 9e-50
 Identities = 91/123 (73%), Positives = 105/123 (85%)
 Frame = -1

Query: 377 MNEDVFLEEAVARYKGFLHMIKRNKERSIKRFCVPTYDIDVIWHSHQLHPVSYCKDLVEV 198
           M  D+F++E+VARYKGFL++IKRNKE+ IKRFCVPTYDID+IWHSHQLHPV+Y KDL E 
Sbjct: 183 MKNDLFIKESVARYKGFLYLIKRNKEKGIKRFCVPTYDIDLIWHSHQLHPVAYGKDLNEA 242

Query: 197 LGQILEHDDTDSDRTKGQKLDTGFSGTTMHWENTFGSRYWIAGGMYRGVAPSPVTVIPLL 18
           LG++LEHDDTDSDRTKG+KLD GFSGTT  WE TFG+RYW AG MYRG APSP+T  P  
Sbjct: 243 LGKVLEHDDTDSDRTKGKKLDVGFSGTTKQWEVTFGTRYWKAGAMYRGNAPSPITSNPFS 302

Query: 17  SKI 9
           S I
Sbjct: 303 SSI 305


>ref|XP_002321500.1| predicted protein [Populus trichocarpa] gi|222868496|gb|EEF05627.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  199 bits (507), Expect = 2e-49
 Identities = 90/125 (72%), Positives = 103/125 (82%)
 Frame = -1

Query: 377 MNEDVFLEEAVARYKGFLHMIKRNKERSIKRFCVPTYDIDVIWHSHQLHPVSYCKDLVEV 198
           MN D+FL+ A+ARYKGFLH+IKRN E+SI  FCVPTYDID+IWH+HQLHPVSYCKD+ + 
Sbjct: 183 MNNDIFLQGAIARYKGFLHIIKRNWEKSINCFCVPTYDIDLIWHTHQLHPVSYCKDVSQA 242

Query: 197 LGQILEHDDTDSDRTKGQKLDTGFSGTTMHWENTFGSRYWIAGGMYRGVAPSPVTVIPLL 18
           LG+IL HDD DSDR+KG+KLD GFSGTT HWE TFG RYW AG MYRG  PSP+T IP  
Sbjct: 243 LGRILAHDDMDSDRSKGKKLDVGFSGTTRHWEETFGRRYWKAGAMYRGSDPSPLTTIPFQ 302

Query: 17  SKIES 3
           S I S
Sbjct: 303 SNILS 307


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