BLASTX nr result

ID: Coptis23_contig00002858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002858
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326452.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
ref|XP_002303352.1| predicted protein [Populus trichocarpa] gi|2...    60   6e-07

>ref|XP_002326452.1| predicted protein [Populus trichocarpa] gi|222833774|gb|EEE72251.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = +3

Query: 228 FILKVPFSIRHINRVYNNAFAASRLFLFRLGVIMFGEELEAY---NGQRWERALRLVRER 398
           ++LK+ FS+R + + Y +   +SRLF F+L  I F  +  A    N  R  RALRL+ +R
Sbjct: 32  YVLKLTFSVRLVRQAYTDLLYSSRLFFFQLSQIAFDADQPAALAGNSTRLGRALRLLNQR 91

Query: 399 LINARRSWTTQIHEDSLHAATM 464
           +  ARRS T Q  ED+ HA +M
Sbjct: 92  VTRARRSPTAQDDEDNFHALSM 113


>ref|XP_002303352.1| predicted protein [Populus trichocarpa] gi|222840784|gb|EEE78331.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +3

Query: 228 FILKVPFSIRHINRVYNNAFAASRLFLFRLGVIMFGEELEAYNGQ---RWERALRLVRER 398
           ++LK+ F++R   R Y     +SRLFLF+L  I F  +  A  G    R  RALRL+ +R
Sbjct: 32  YVLKLTFTVRLFRRAYTGLLHSSRLFLFQLSQIAFDTDQPAPVGNDSTRLRRALRLIYQR 91

Query: 399 LINARRSWTTQIHEDSLHAATM 464
           +   RRS TTQ  ED+ +A +M
Sbjct: 92  VTRTRRSQTTQDDEDNFNALSM 113


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