BLASTX nr result

ID: Coptis23_contig00002855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00002855
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518588.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
ref|XP_004149935.1| PREDICTED: uncharacterized protein LOC101212...    92   6e-17
ref|XP_003593395.1| hypothetical protein MTR_2g010970 [Medicago ...    90   2e-16
ref|XP_002283200.1| PREDICTED: uncharacterized protein LOC100260...    90   2e-16
ref|XP_002319261.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>ref|XP_002518588.1| conserved hypothetical protein [Ricinus communis]
           gi|223542433|gb|EEF43975.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/59 (76%), Positives = 48/59 (81%)
 Frame = -3

Query: 177 VKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYGELRGLEGLSQEELFLWLP 1
           VKS+ LD NG LEV L GPCL KFE RVYFD+VV+ NLSYG L GLEGLSQEELFLW P
Sbjct: 47  VKSYNLDHNGRLEVHLDGPCLAKFETRVYFDSVVRANLSYGGLVGLEGLSQEELFLWFP 105


>ref|XP_004149935.1| PREDICTED: uncharacterized protein LOC101212020 [Cucumis sativus]
           gi|449497076|ref|XP_004160304.1| PREDICTED:
           uncharacterized protein LOC101230937 [Cucumis sativus]
          Length = 167

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/78 (58%), Positives = 55/78 (70%)
 Frame = -3

Query: 234 SIHDXXXXXXXXXXXXXKEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYG 55
           +IHD             KEVKS+ L  NGLL+V L GPCLTK+ENRV F++VV  NLSYG
Sbjct: 32  TIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFLDGPCLTKYENRVIFESVVTANLSYG 91

Query: 54  ELRGLEGLSQEELFLWLP 1
            L G++GL+QEELFLWLP
Sbjct: 92  SLIGVQGLTQEELFLWLP 109


>ref|XP_003593395.1| hypothetical protein MTR_2g010970 [Medicago truncatula]
           gi|355482443|gb|AES63646.1| hypothetical protein
           MTR_2g010970 [Medicago truncatula]
          Length = 173

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/59 (67%), Positives = 51/59 (86%)
 Frame = -3

Query: 177 VKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGNLSYGELRGLEGLSQEELFLWLP 1
           VKS+ LD +G+LEV L  PC+ K+E RV+F+TVV+ NLS+G+L+GLEGLSQEELFLWLP
Sbjct: 46  VKSYHLDQSGVLEVKLDSPCIVKYETRVFFETVVRANLSFGQLKGLEGLSQEELFLWLP 104


>ref|XP_002283200.1| PREDICTED: uncharacterized protein LOC100260725 [Vitis vinifera]
           gi|302143173|emb|CBI20468.3| unnamed protein product
           [Vitis vinifera]
          Length = 154

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/82 (57%), Positives = 55/82 (67%)
 Frame = -3

Query: 246 SHCDSIHDXXXXXXXXXXXXXKEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGN 67
           S  D+IHD             K V+S+ LD +G L+V L GPCLTKFE RVYFD+VV  N
Sbjct: 17  SAVDTIHDLLRSRGLPAGLLPKAVRSYTLDPDGRLQVFLDGPCLTKFETRVYFDSVVTAN 76

Query: 66  LSYGELRGLEGLSQEELFLWLP 1
           LSYG L G+ GL+QEELFLWLP
Sbjct: 77  LSYGGLIGVVGLTQEELFLWLP 98


>ref|XP_002319261.1| predicted protein [Populus trichocarpa] gi|222857637|gb|EEE95184.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/82 (56%), Positives = 55/82 (67%)
 Frame = -3

Query: 246 SHCDSIHDXXXXXXXXXXXXXKEVKSFKLDTNGLLEVTLFGPCLTKFENRVYFDTVVKGN 67
           S   SIHD             KEVKS+ L  +G LEV L GPCLTK+ENRV+F++VV+ N
Sbjct: 27  SFSSSIHDLLISKGLPAGLLPKEVKSYTLSEDGYLEVFLDGPCLTKYENRVFFESVVRAN 86

Query: 66  LSYGELRGLEGLSQEELFLWLP 1
           L+Y  L G+ GLSQEELFLWLP
Sbjct: 87  LTYRSLSGVVGLSQEELFLWLP 108


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